RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 EZH2Q15910 746 aaKnown RBP7.51□□□□□ -1.21
CCDC171-207ENST00000478913 NFE2L2Q16236 605 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 SLC10A6Q3KNW5 377 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 NFXL1Q6ZNB6 911 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 DPH6Q7L8W6 267 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 AGBL5Q8NDL9 886 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 BVESQ8NE79 360 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 ST13P5Q8NFI4 369 aaPredicted RBP7.51□□□□□ -1.21
CCDC171-207ENST00000478913 RCC1LQ96I51 464 aaKnown RBP7.51□□□□□ -1.21
CCDC171-207ENST00000478913 FOXP3Q9BZS1 431 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 ZSWIM4Q9H7M6 989 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 PAK6Q9NQU5 681 aaPredicted RBP7.51□□□□□ -1.21
CCDC171-207ENST00000478913 SNTG2Q9NY99 539 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 LMCD1Q9NZU5 365 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 LRP2BPQ9P2M1 347 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 CGGBP1Q9UFW8 167 aaPredicted RBP7.51□□□□□ -1.21
CCDC171-207ENST00000478913 TCFL5Q9UL49 500 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 AKT3Q9Y243 479 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 ADAMTS4O75173 837 aa7.5□□□□□ -1.21
CCDC171-207ENST00000478913 SYPP08247 313 aa7.5□□□□□ -1.21
CCDC171-207ENST00000478913 HSPA1AP0DMV8 641 aaKnown RBP7.5□□□□□ -1.21
CCDC171-207ENST00000478913 HSPA1BP0DMV9 641 aaKnown RBP7.5□□□□□ -1.21
CCDC171-207ENST00000478913 IFRD2Q12894 506 aaPredicted RBP7.5□□□□□ -1.21
CCDC171-207ENST00000478913 GPR162Q16538 588 aa7.5□□□□□ -1.21
CCDC171-207ENST00000478913 CCDC144BQ3MJ40 725 aa7.5□□□□□ -1.21
CCDC171-207ENST00000478913 MTERF2Q49AM1 385 aa7.5□□□□□ -1.21
CCDC171-207ENST00000478913 POMZP3Q6PJE2 187 aa7.5□□□□□ -1.21
CCDC171-207ENST00000478913 RNF111Q6ZNA4 994 aa7.5□□□□□ -1.21
CCDC171-207ENST00000478913 LRP10Q7Z4F1 713 aa7.5□□□□□ -1.21
CCDC171-207ENST00000478913 THEMISQ8N1K5 641 aaPredicted RBP7.5□□□□□ -1.21
CCDC171-207ENST00000478913 ARHGEF39Q8N4T4 335 aa7.5□□□□□ -1.21
CCDC171-207ENST00000478913 USHBP1Q8N6Y0 703 aa7.5□□□□□ -1.21
CCDC171-207ENST00000478913 ZNF513Q8N8E2 541 aaPredicted RBP7.5□□□□□ -1.21
CCDC171-207ENST00000478913 LRRN4CLQ8ND94 238 aa7.5□□□□□ -1.21
CCDC171-207ENST00000478913 ZNF142P52746 1687 aaPredicted RBP7.5□□□□□ -1.21
CCDC171-207ENST00000478913 DNMT1P26358 1616 aaKnown RBP7.49□□□□□ -1.21
CCDC171-207ENST00000478913 IGSF3O75054 1194 aa7.49□□□□□ -1.21
CCDC171-207ENST00000478913 FUT4P22083 530 aa7.49□□□□□ -1.21
CCDC171-207ENST00000478913 BMP8BP34820 402 aa7.49□□□□□ -1.21
CCDC171-207ENST00000478913 POU4F1Q01851 419 aa7.49□□□□□ -1.21
CCDC171-207ENST00000478913 PLCL1Q15111 1095 aa7.49□□□□□ -1.21
CCDC171-207ENST00000478913 LINC00116Q8NCU8 138 aa7.49□□□□□ -1.21
CCDC171-207ENST00000478913 SYTL4Q96C24 671 aaPredicted RBP7.49□□□□□ -1.21
CCDC171-207ENST00000478913 LRRC9Q6ZRR7 1453 aa7.49□□□□□ -1.21
CCDC171-207ENST00000478913 IQCA1LA6NCM1 817 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 FKTNO75072 461 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 KCNH1O95259 989 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 CD3EP07766 207 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 KDM5CP41229 1560 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 AMPD2Q01433 879 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 TEKQ02763 1124 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 GRB10Q13322 594 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 ZNF227Q86WZ6 799 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 AFAP1Q8N556 730 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 PI4K2BQ8TCG2 481 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 MRFAP1L1Q96HT8 127 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 SYT17Q9BSW7 474 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 PRDM7Q9NQW5 492 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 CDK11AQ9UQ88 783 aaPredicted RBP7.48□□□□□ -1.21
CCDC171-207ENST00000478913 EMC9Q9Y3B6 208 aa7.48□□□□□ -1.21
CCDC171-207ENST00000478913 FAM221BA6H8Z2 402 aa7.47□□□□□ -1.21
CCDC171-207ENST00000478913 ZNF205O95201 554 aa7.47□□□□□ -1.21
CCDC171-207ENST00000478913 ITGAVP06756 1048 aa7.47□□□□□ -1.21
CCDC171-207ENST00000478913 VAV1P15498 845 aa7.47□□□□□ -1.21
CCDC171-207ENST00000478913 YBX3P16989 372 aaKnown RBP eCLIP7.47□□□□□ -1.21
CCDC171-207ENST00000478913 ENDOUP21128 410 aaKnown RBP7.47□□□□□ -1.21
CCDC171-207ENST00000478913 RPL10P27635 214 aaKnown RBP7.47□□□□□ -1.21
CCDC171-207ENST00000478913 NOP2P46087 812 aaKnown RBP7.47□□□□□ -1.21
CCDC171-207ENST00000478913 SLC23A3Q6PIS1 610 aa7.47□□□□□ -1.21
CCDC171-207ENST00000478913 TRIM59Q8IWR1 403 aa7.47□□□□□ -1.21
CCDC171-207ENST00000478913 ZNF669Q96BR6 464 aaPredicted RBP7.47□□□□□ -1.21
CCDC171-207ENST00000478913 ALPK1Q96QP1 1244 aa7.47□□□□□ -1.21
CCDC171-207ENST00000478913 LGR4Q9BXB1 951 aa7.47□□□□□ -1.21
CCDC171-207ENST00000478913 SLAMF8Q9P0V8 285 aa7.47□□□□□ -1.21
CCDC171-207ENST00000478913 PFDN2Q9UHV9 154 aa7.47□□□□□ -1.21
CCDC171-207ENST00000478913 MED14O60244 1454 aa7.47□□□□□ -1.21
CCDC171-207ENST00000478913 USP19O94966 1318 aa7.47□□□□□ -1.21
CCDC171-207ENST00000478913 POLR1AO95602 1720 aaPredicted RBP7.47□□□□□ -1.21
CCDC171-207ENST00000478913 VAMP4O75379 141 aa7.46□□□□□ -1.22
CCDC171-207ENST00000478913 GP2P55259 537 aaKnown RBP7.46□□□□□ -1.22
CCDC171-207ENST00000478913 SSRP1Q08945 709 aaKnown RBP7.46□□□□□ -1.22
CCDC171-207ENST00000478913 DPY19L1Q2PZI1 675 aa7.46□□□□□ -1.22
CCDC171-207ENST00000478913 SPATC1Q76KD6 591 aa7.46□□□□□ -1.22
CCDC171-207ENST00000478913 WAPLQ7Z5K2 1190 aa7.46□□□□□ -1.22
CCDC171-207ENST00000478913 LRRC47Q8N1G4 583 aaKnown RBP7.46□□□□□ -1.22
CCDC171-207ENST00000478913 MRGPRX3Q96LB0 322 aa7.46□□□□□ -1.22
CCDC171-207ENST00000478913 CDADC1Q9BWV3 514 aa7.46□□□□□ -1.22
CCDC171-207ENST00000478913 PCNTO95613 3336 aa7.46□□□□□ -1.22
CCDC171-207ENST00000478913 KDM5DQ9BY66 1539 aa7.46□□□□□ -1.22
CCDC171-207ENST00000478913 ATRNO75882 1429 aa7.45□□□□□ -1.22
CCDC171-207ENST00000478913 CHD4Q14839 1912 aa7.45□□□□□ -1.22
CCDC171-207ENST00000478913 ATP10BO94823 1461 aa7.45□□□□□ -1.22
CCDC171-207ENST00000478913 RALGAPBQ86X10 1494 aa7.45□□□□□ -1.22
CCDC171-207ENST00000478913 GSTM1P09488 218 aa7.45□□□□□ -1.22
CCDC171-207ENST00000478913 GTF2IRD2BQ6EKJ0 949 aa7.45□□□□□ -1.22
CCDC171-207ENST00000478913 GTF2IRD2Q86UP8 949 aa7.45□□□□□ -1.22
CCDC171-207ENST00000478913 BTN2A2Q8WVV5 523 aa7.45□□□□□ -1.22
CCDC171-207ENST00000478913 SGSM3Q96HU1 749 aa7.45□□□□□ -1.22
CCDC171-207ENST00000478913 SLC12A9Q9BXP2 914 aa7.45□□□□□ -1.22
CCDC171-207ENST00000478913 CWC22Q9HCG8 908 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms