RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 SCG2P13521 617 aa13.11□□□□□ -0.31
SRRT-211ENST00000478693 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
SRRT-211ENST00000478693 CYP2C19P33261 490 aa13.11□□□□□ -0.31
SRRT-211ENST00000478693 CNTN2Q02246 1040 aa13.11□□□□□ -0.31
SRRT-211ENST00000478693 FUT2Q10981 343 aa13.11□□□□□ -0.31
SRRT-211ENST00000478693 OLFML2BQ68BL8 750 aa13.11□□□□□ -0.31
SRRT-211ENST00000478693 PPP1R18Q6NYC8 613 aa13.11□□□□□ -0.31
SRRT-211ENST00000478693 CCDC83Q8IWF9 413 aa13.11□□□□□ -0.31
SRRT-211ENST00000478693 SMARCC2Q8TAQ2 1214 aa13.11□□□□□ -0.31
SRRT-211ENST00000478693 CCDC12Q8WUD4 166 aaPredicted RBP13.11□□□□□ -0.31
SRRT-211ENST00000478693 SH2B1Q9NRF2 756 aaPredicted RBP13.11□□□□□ -0.31
SRRT-211ENST00000478693 CNPY2Q9Y2B0 182 aa13.11□□□□□ -0.31
SRRT-211ENST00000478693 RBBP6Q7Z6E9 1792 aaKnown RBP13.11□□□□□ -0.31
SRRT-211ENST00000478693 DNAJC25-GNG10A0A024R161 153 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 ASB14A6NK59 587 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 CCDC85CA6NKD9 419 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 DEXIO95424 95 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 CNGA1P29973 690 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 HOXA13P31271 388 aaPredicted RBP13.1□□□□□ -0.31
SRRT-211ENST00000478693 MCM2P49736 904 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 ALDH5A1P51649 535 aaPredicted RBP13.1□□□□□ -0.31
SRRT-211ENST00000478693 TRIM32Q13049 653 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 NTRK3Q16288 839 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
SRRT-211ENST00000478693 FCHSD1Q86WN1 690 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 RGS22Q8NE09 1264 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 CCDC148Q8NFR7 591 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 ARMC5Q96C12 935 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 TMEM106CQ9BVX2 250 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 ZHX1Q9UKY1 873 aaPredicted RBP13.1□□□□□ -0.31
SRRT-211ENST00000478693 PCNTO95613 3336 aa13.1□□□□□ -0.31
SRRT-211ENST00000478693 SOWAHBA6NEL2 793 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 B4DLN1 442 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 STXBP3O00186 592 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 ADCY7P51828 1080 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 MRPL12P52815 198 aaKnown RBP13.09□□□□□ -0.31
SRRT-211ENST00000478693 CACNB2Q08289 660 aaPredicted RBP13.09□□□□□ -0.31
SRRT-211ENST00000478693 ARHGEF16Q5VV41 709 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 ARMCX2Q7L311 632 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 ZNF467Q7Z7K2 595 aaPredicted RBP13.09□□□□□ -0.31
SRRT-211ENST00000478693 MSL3Q8N5Y2 521 aaKnown RBP13.09□□□□□ -0.31
SRRT-211ENST00000478693 SAMD3Q8N6K7 520 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 FAM133AQ8N9E0 248 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 SYTL5Q8TDW5 730 aaPredicted RBP13.09□□□□□ -0.31
SRRT-211ENST00000478693 WASF1Q92558 559 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 TBC1D5Q92609 795 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 ZNF333Q96JL9 665 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 PURBQ96QR8 312 aaKnown RBP13.09□□□□□ -0.31
SRRT-211ENST00000478693 TINF2Q9BSI4 451 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 MAF1Q9H063 256 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 RNF208Q9H0X6 261 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 PSTPIP2Q9H939 334 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 HMX1Q9NP08 348 aaPredicted RBP13.09□□□□□ -0.31
SRRT-211ENST00000478693 BARHL2Q9NY43 387 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 SYNGAP1Q96PV0 1343 aa13.09□□□□□ -0.31
SRRT-211ENST00000478693 SMCO2A6NFE2 343 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 OPLAHO14841 1288 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 CCL5P13501 91 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 XBP1P17861 261 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 EIF2AK2P19525 551 aaKnown RBP13.08□□□□□ -0.32
SRRT-211ENST00000478693 HSD17B4P51659 736 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 PDE4DQ08499 809 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 MTFR1Q15390 333 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 UBE2SQ16763 222 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 DNERQ8NFT8 737 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 NSUN6Q8TEA1 469 aaKnown RBP13.08□□□□□ -0.32
SRRT-211ENST00000478693 TAAR1Q96RJ0 339 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 RMDN3Q96TC7 470 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.08□□□□□ -0.325e-6■■■■□ 22.3
SRRT-211ENST00000478693 UNC93B1Q9H1C4 597 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 EHMT1Q9H9B1 1298 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 C6orf50Q9HD87 102 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.08□□□□□ -0.32
SRRT-211ENST00000478693 MAP3K20Q9NYL2 800 aaKnown RBP13.08□□□□□ -0.32
SRRT-211ENST00000478693 VPS54Q9P1Q0 977 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 ORC3Q9UBD5 711 aaPredicted RBP13.08□□□□□ -0.32
SRRT-211ENST00000478693 RPTORQ8N122 1335 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 STK36Q9NRP7 1315 aa13.08□□□□□ -0.32
SRRT-211ENST00000478693 SPDYE3A6NKU9 549 aa13.07□□□□□ -0.32
SRRT-211ENST00000478693 DTNBO60941 627 aa13.07□□□□□ -0.32
SRRT-211ENST00000478693 CCND3P30281 292 aaPredicted RBP13.07□□□□□ -0.32
SRRT-211ENST00000478693 FOSBP53539 338 aa13.07□□□□□ -0.32
SRRT-211ENST00000478693 NLRP5P59047 1200 aa13.07□□□□□ -0.32
SRRT-211ENST00000478693 PKN1Q16512 942 aa13.07□□□□□ -0.32
SRRT-211ENST00000478693 USP17L6PQ6QN14 398 aa13.07□□□□□ -0.32
SRRT-211ENST00000478693 EEPD1Q7L9B9 569 aa13.07□□□□□ -0.32
SRRT-211ENST00000478693 NSUN7Q8NE18 718 aaKnown RBP13.07□□□□□ -0.32
SRRT-211ENST00000478693 FGD4Q96M96 766 aa13.07□□□□□ -0.32
SRRT-211ENST00000478693 GLT8D2Q9H1C3 349 aa13.07□□□□□ -0.32
SRRT-211ENST00000478693 COL20A1Q9P218 1284 aa13.07□□□□□ -0.32
SRRT-211ENST00000478693 MYH6P13533 1939 aa13.07□□□□□ -0.32
SRRT-211ENST00000478693 JAK2O60674 1132 aa13.06□□□□□ -0.32
SRRT-211ENST00000478693 CD2BP2O95400 341 aaKnown RBP13.06□□□□□ -0.32
SRRT-211ENST00000478693 CTDNEP1O95476 244 aa13.06□□□□□ -0.32
SRRT-211ENST00000478693 CYBAP13498 195 aa13.06□□□□□ -0.32
SRRT-211ENST00000478693 GNA11P29992 359 aa13.06□□□□□ -0.32
SRRT-211ENST00000478693 TRIM29Q14134 588 aa13.06□□□□□ -0.32
SRRT-211ENST00000478693 PRAMEF19Q5SWL8 479 aa13.06□□□□□ -0.32
SRRT-211ENST00000478693 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
SRRT-211ENST00000478693 MAMDC4Q6UXC1 1216 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms