RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 PCDHA13Q9Y5I0 950 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 NFS1Q9Y697 457 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 PDS5AQ29RF7 1337 aaKnown RBP10.9□□□□□ -0.66
COL13A1-207ENST00000478219 LTN1O94822 1766 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 H7C1W4 665 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 EYA2O00167 538 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 TACC1O75410 805 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 IPO7O95373 1038 aaKnown RBP10.9□□□□□ -0.66
COL13A1-207ENST00000478219 CLTAP09496 248 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 IL15P40933 162 aaPredicted RBP10.9□□□□□ -0.66
COL13A1-207ENST00000478219 ZNF658Q5TYW1 1059 aaPredicted RBP10.9□□□□□ -0.66
COL13A1-207ENST00000478219 ARMC3Q5W041 872 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 AP1ARQ63HQ0 302 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 MIS18BP1Q6P0N0 1132 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 ZNF790Q6PG37 636 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 CACNA2D3Q8IZS8 1091 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 THEMISQ8N1K5 641 aaPredicted RBP10.9□□□□□ -0.66
COL13A1-207ENST00000478219 MDM1Q8TC05 714 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 GPR108Q9NPR9 543 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 C15orf41Q9Y2V0 281 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 BAZ2BQ9UIF8 2168 aaKnown RBP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 DNAJC8O75937 253 aaPredicted RBP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 SMNDC1O75940 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 SRGNP10124 158 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 PRLRP16471 622 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 HSD17B3P37058 310 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 ZNF844Q08AG5 666 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 PAK2Q13177 524 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 KLHDC7AQ5VTJ3 777 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 MSL1Q68DK7 614 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 PNMA8AQ86V59 439 aaPredicted RBP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 PROSER2Q86WR7 435 aaPredicted RBP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 DDX42Q86XP3 938 aaKnown RBP eCLIP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 CRACR2BQ8N4Y2 399 aaPredicted RBP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 MREGQ8N565 214 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 AGAP11Q8TF27 550 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 ZNF496Q96IT1 587 aaPredicted RBP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 CCDC42Q96M95 316 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 CCDC85AQ96PX6 553 aaPredicted RBP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 SH3GL3Q99963 347 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 YIPF3Q9GZM5 350 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 PACSIN2Q9UNF0 486 aaPredicted RBP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 MYH6P13533 1939 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 ARHGAP23Q9P227 1491 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 C5orf60A6NFR6 353 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 ADAMTS3O15072 1205 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 RPN1P04843 607 aaKnown RBP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 TCP1P17987 556 aaKnown RBP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 ECHS1P30084 290 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 FLT3P36888 993 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 TBC1D1Q86TI0 1168 aaPredicted RBP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 CCDC170Q8IYT3 715 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 TMEM87BQ96K49 555 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 NEUROG2Q9H2A3 272 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 CEP131Q9UPN4 1083 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 LAMB4A4D0S4 1761 aa10.89□□□□□ -0.67
COL13A1-207ENST00000478219 PHRF1Q9P1Y6 1649 aaKnown RBP10.89□□□□□ -0.67
COL13A1-207ENST00000478219 MYH7P12883 1935 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 H7C1D1 291 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 RAD51CO43502 376 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 DRD4P21917 467 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 LTKP29376 864 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 PAFAH1B1P43034 410 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 ZBED6P86452 979 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 PTGDRQ13258 359 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 RTN1Q16799 776 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 CAPRIN2Q6IMN6 1127 aaKnown RBP10.88□□□□□ -0.67
COL13A1-207ENST00000478219 MAEAQ7L5Y9 396 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 C2CD5Q86YS7 1000 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 LPIN2Q92539 896 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 SAAL1Q96ER3 474 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 ACSBG1Q96GR2 724 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 PCMTD1Q96MG8 357 aaPredicted RBP10.88□□□□□ -0.67
COL13A1-207ENST00000478219 UBAC1Q9BSL1 405 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 SPATA31A3Q5VYP0 1347 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 SRRM3A6NNA2 597 aaPredicted RBP10.88□□□□□ -0.67
COL13A1-207ENST00000478219 DIAPH2O60879 1101 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 EIF4A3P38919 411 aaKnown RBP10.88□□□□□ -0.67
COL13A1-207ENST00000478219 KIF11P52732 1056 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 IFFO1Q0D2I5 559 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 SPA17Q15506 151 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 SPICE1Q8N0Z3 855 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 ADSSL1Q8N142 457 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 NUP133Q8WUM0 1156 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 PRCCQ92733 491 aaPredicted RBP10.88□□□□□ -0.67
COL13A1-207ENST00000478219 L3MBTL3Q96JM7 780 aaPredicted RBP10.88□□□□□ -0.67
COL13A1-207ENST00000478219 SPAG5Q96R06 1193 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 TUBGCP2Q9BSJ2 902 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 EXOC1Q9NV70 894 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 ZNHIT6Q9NWK9 470 aaKnown RBP10.88□□□□□ -0.67
COL13A1-207ENST00000478219 AGAP1Q9UPQ3 857 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 TBC1D2BQ9UPU7 963 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 SH3BP1Q9Y3L3 701 aa10.88□□□□□ -0.67
COL13A1-207ENST00000478219 A8MUI8 341 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 GCOM1H8Y6P7 765 aaPredicted RBP10.87□□□□□ -0.67
COL13A1-207ENST00000478219 MAP3K13O43283 966 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 GTPBP6O43824 516 aaPredicted RBP10.87□□□□□ -0.67
COL13A1-207ENST00000478219 ZFYP08048 801 aaPredicted RBP10.87□□□□□ -0.67
COL13A1-207ENST00000478219 LINGO3P0C6S8 592 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 MYZAPP0CAP1 466 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms