RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 CPLX1O14810 134 aa13.27□□□□□ -0.29
CBWD3-206ENST00000478048 ATP2A1O14983 1001 aa13.27□□□□□ -0.29
CBWD3-206ENST00000478048 ZBTB5O15062 677 aa13.27□□□□□ -0.29
CBWD3-206ENST00000478048 FOXN1O15353 648 aa13.27□□□□□ -0.29
CBWD3-206ENST00000478048 IFNAR1P17181 557 aa13.27□□□□□ -0.29
CBWD3-206ENST00000478048 CTGFP29279 349 aa13.27□□□□□ -0.29
CBWD3-206ENST00000478048 SNRNP48Q6IEG0 339 aaKnown RBP13.27□□□□□ -0.29
CBWD3-206ENST00000478048 IL27Q8NEV9 243 aa13.27□□□□□ -0.29
CBWD3-206ENST00000478048 EFCC1Q9HA90 598 aa13.27□□□□□ -0.29
CBWD3-206ENST00000478048 V9GY48 417 aaPredicted RBP13.27□□□□□ -0.29
CBWD3-206ENST00000478048 CASP8AP2Q9UKL3 1982 aa13.26□□□□□ -0.29
CBWD3-206ENST00000478048 ICAM1P05362 532 aa13.26□□□□□ -0.29
CBWD3-206ENST00000478048 MCM2P49736 904 aa13.26□□□□□ -0.29
CBWD3-206ENST00000478048 OAZ1P54368 228 aa13.26□□□□□ -0.29
CBWD3-206ENST00000478048 SP3Q02447 781 aa13.26□□□□□ -0.29
CBWD3-206ENST00000478048 USH1GQ495M9 461 aa13.26□□□□□ -0.29
CBWD3-206ENST00000478048 TYW1BQ6NUM6 668 aa13.26□□□□□ -0.29
CBWD3-206ENST00000478048 ZNF296Q8WUU4 475 aaPredicted RBP13.26□□□□□ -0.29
CBWD3-206ENST00000478048 WNT2BQ93097 391 aa13.26□□□□□ -0.29
CBWD3-206ENST00000478048 RRP36Q96EU6 259 aaKnown RBP13.26□□□□□ -0.29
CBWD3-206ENST00000478048 TEX13BQ9BXU2 312 aa13.26□□□□□ -0.29
CBWD3-206ENST00000478048 ARHGAP39Q9C0H5 1083 aa13.26□□□□□ -0.29
CBWD3-206ENST00000478048 SH2B1Q9NRF2 756 aaPredicted RBP13.26□□□□□ -0.29
CBWD3-206ENST00000478048 HOMER2Q9NSB8 354 aa13.26□□□□□ -0.29
CBWD3-206ENST00000478048 CCPG1Q9ULG6 757 aa13.26□□□□□ -0.29
CBWD3-206ENST00000478048 PNMA6FA0A0J9YX94 578 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 ALAS1P13196 640 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 ERCC3P19447 782 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 FBXO11Q86XK2 927 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 RIOX2Q8IUF8 465 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 NSUN7Q8NE18 718 aaKnown RBP13.25□□□□□ -0.29
CBWD3-206ENST00000478048 COA7Q96BR5 231 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 SLC26A6Q9BXS9 759 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 MGAMO43451 1857 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 JAK2O60674 1132 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 HSPA8P11142 646 aaKnown RBP13.25□□□□□ -0.29
CBWD3-206ENST00000478048 LACTBP83111 547 aaPredicted RBP13.25□□□□□ -0.29
CBWD3-206ENST00000478048 PKN1Q16512 942 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 MUM1L1Q5H9M0 696 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 NCAPG2Q86XI2 1143 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 CD99L2Q8TCZ2 262 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 SNX21Q969T3 373 aa13.25□□□□□ -0.29
CBWD3-206ENST00000478048 SEC63Q9UGP8 760 aaKnown RBP13.25□□□□□ -0.29
CBWD3-206ENST00000478048 PRPF3O43395 683 aaKnown RBP13.24□□□□□ -0.29
CBWD3-206ENST00000478048 FMNL1O95466 1100 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-206ENST00000478048 SSRP1Q08945 709 aaKnown RBP13.24□□□□□ -0.29
CBWD3-206ENST00000478048 CAMK2BQ13554 666 aa13.24□□□□□ -0.29
CBWD3-206ENST00000478048 WDR78Q5VTH9 848 aa13.24□□□□□ -0.29
CBWD3-206ENST00000478048 CPLX2Q6PUV4 134 aaKnown RBP13.24□□□□□ -0.29
CBWD3-206ENST00000478048 GPKOWQ92917 476 aaPredicted RBP eCLIP13.24□□□□□ -0.29
CBWD3-206ENST00000478048 AIFM3Q96NN9 605 aa13.24□□□□□ -0.29
CBWD3-206ENST00000478048 TRERF1Q96PN7 1200 aa13.24□□□□□ -0.29
CBWD3-206ENST00000478048 AMNQ9BXJ7 453 aa13.24□□□□□ -0.29
CBWD3-206ENST00000478048 RNF26Q9BY78 433 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-206ENST00000478048 RNF146Q9NTX7 359 aa13.24□□□□□ -0.29
CBWD3-206ENST00000478048 PTPDC1A2A3K4 754 aa13.23□□□□□ -0.29
CBWD3-206ENST00000478048 K7ELQ4 463 aaPredicted RBP13.23□□□□□ -0.29
CBWD3-206ENST00000478048 FKTNO75072 461 aa13.23□□□□□ -0.29
CBWD3-206ENST00000478048 FDPSP14324 419 aaKnown RBP13.23□□□□□ -0.29
CBWD3-206ENST00000478048 CCNA1P78396 465 aa13.23□□□□□ -0.29
CBWD3-206ENST00000478048 NOM1Q5C9Z4 860 aaKnown RBP13.23□□□□□ -0.29
CBWD3-206ENST00000478048 WWC2Q6AWC2 1192 aa13.23□□□□□ -0.29
CBWD3-206ENST00000478048 DDX11Q96FC9 970 aa13.23□□□□□ -0.29
CBWD3-206ENST00000478048 TRIM47Q96LD4 638 aa13.23□□□□□ -0.29
CBWD3-206ENST00000478048 PCDHA1Q9Y5I3 950 aa13.23□□□□□ -0.29
CBWD3-206ENST00000478048 ZNFX1Q9P2E3 1918 aaKnown RBP13.23□□□□□ -0.29
CBWD3-206ENST00000478048 NFIBO00712 420 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 OPLAHO14841 1288 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 CDKL5O76039 1030 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 SLC25A27O95847 323 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 PSMC4P43686 418 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 LBX1P52954 281 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 AKAP17AQ02040 695 aaKnown RBP13.22□□□□□ -0.29
CBWD3-206ENST00000478048 PFKFB3Q16875 520 aaPredicted RBP13.22□□□□□ -0.29
CBWD3-206ENST00000478048 HEATR3Q7Z4Q2 680 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 GPR142Q7Z601 462 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 TRIM22Q8IYM9 498 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 SHCBP1Q8NEM2 672 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 CLEC4DQ8WXI8 215 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 TBC1D5Q92609 795 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 SHISA4Q96DD7 197 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 ORC3Q9UBD5 711 aaPredicted RBP13.22□□□□□ -0.29
CBWD3-206ENST00000478048 RABGEF1Q9UJ41 708 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 PLXNB2O15031 1838 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 SCG2P13521 617 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 MAPK4P31152 587 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 HSCBQ8IWL3 235 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 CCAR1Q8IX12 1150 aaKnown RBP13.22□□□□□ -0.29
CBWD3-206ENST00000478048 CHST13Q8NET6 341 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 SMARCC2Q8TAQ2 1214 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 MROH8Q9H579 483 aa13.22□□□□□ -0.29
CBWD3-206ENST00000478048 STXBP3O00186 592 aa13.21□□□□□ -0.3
CBWD3-206ENST00000478048 TNPO2O14787 897 aaKnown RBP13.21□□□□□ -0.3
CBWD3-206ENST00000478048 DEXIO95424 95 aa13.21□□□□□ -0.3
CBWD3-206ENST00000478048 CTCFP49711 727 aaPredicted RBP13.21□□□□□ -0.3
CBWD3-206ENST00000478048 CUL4AQ13619 759 aa13.21□□□□□ -0.3
CBWD3-206ENST00000478048 TKFCQ3LXA3 575 aa13.21□□□□□ -0.3
CBWD3-206ENST00000478048 PLEKHH3Q7Z736 793 aa13.21□□□□□ -0.3
CBWD3-206ENST00000478048 BBXQ8WY36 941 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms