RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 RBAK-RBAKDNI3L0D1 243 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 ENPP3O14638 875 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 SMAD7O15105 426 aaKnown RBP4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 COQ9O75208 318 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 VAMP4O75379 141 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 LDHCP07864 332 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 CT47B1P0C2W7 299 aaPredicted RBP4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 TPP2P29144 1249 aaPredicted RBP4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 ETFBP38117 255 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 EIF5P55010 431 aaKnown RBP4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 DCTN1Q14203 1278 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 BMS1Q14692 1282 aaKnown RBP4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 TMEM95Q3KNT9 176 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 GNPTABQ3T906 1256 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 MAP9Q49MG5 647 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 HSP90B2PQ58FF3 399 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 SOGA3Q5TF21 947 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 TDRD10Q5VZ19 366 aaKnown RBP4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 LARP1BQ659C4 914 aaKnown RBP4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 PPFIBP1Q86W92 1011 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 ABI1Q8IZP0 508 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 SYTL5Q8TDW5 730 aaPredicted RBP4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 DHX38Q92620 1227 aaKnown RBP4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 GOLGA1Q92805 767 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 PRDM14Q9GZV8 571 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 ZNF700Q9H0M5 742 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 RANBP17Q9H2T7 1088 aaKnown RBP4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 ZNF408Q9H9D4 720 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 CARS2Q9HA77 564 aaKnown RBP4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 ACTR10Q9NZ32 417 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 PRR13Q9NZ81 148 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 DUSP13Q9UII6 198 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 FBXL21Q9UKT6 434 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 OAS3Q9Y6K5 1087 aaKnown RBP4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 CCDC163A0A0D9SF12 145 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 WASH4PA8MWX3 477 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 SIGLEC6O43699 453 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 HIP1RO75146 1068 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 HMMRO75330 724 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 MTA2O94776 668 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 PRAMEF1O95521 474 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 LDHAP00338 332 aaKnown RBP4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 IGHDP01880 384 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 ESR1P03372 595 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 TP53P04637 393 aaPredicted RBP4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 PDGFRBP09619 1106 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 ATP2B1P20020 1258 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 LTKP29376 864 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 CLK1P49759 484 aaKnown RBP4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 SLC7A5Q01650 507 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 SNW1Q13573 536 aaKnown RBP4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 SAFB2Q14151 953 aaKnown RBP eCLIP4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 ANKRD39Q53RE8 183 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 C1QTNF12Q5T7M4 302 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 KLHL10Q6JEL2 608 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 SLC23A3Q6PIS1 610 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 TMC3Q7Z5M5 1100 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 CREG2Q8IUH2 290 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 C7orf61Q8IZ16 206 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 ZNF655Q8N720 491 aaPredicted RBP4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 DAGLBQ8NCG7 672 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 VPS37AQ8NEZ2 397 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 PI4K2BQ8TCG2 481 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 NEUROD6Q96NK8 337 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 HDAC8Q9BY41 377 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 CHST7Q9NS84 486 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 FAM86C1Q9NVL1 165 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 G3BP2Q9UN86 482 aaKnown RBP4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 LZTS1Q9Y250 596 aa4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 CTDP1Q9Y5B0 961 aaPredicted RBP4.25□□□□□ -1.73
FNDC3B-209ENST00000478016 KIF3BO15066 747 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 SHOXO15266 292 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 DNAJC6O75061 913 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 EGR3Q06889 387 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 NCAPHQ15003 741 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 NFE2L2Q16236 605 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 ZNF792Q3KQV3 632 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 RGL3Q3MIN7 710 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 L1TD1Q5T7N2 865 aaKnown RBP4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 UTP14CQ5TAP6 766 aaKnown RBP4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 DCAF15Q66K64 600 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 VHLLQ6RSH7 139 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 FILIP1Q7Z7B0 1213 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 LMNTD2Q8IXW0 634 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 JDP2Q8WYK2 163 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 CCDC120Q96HB5 630 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 HAUS7Q99871 368 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 ARPC5LQ9BPX5 153 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 ZHX3Q9H4I2 956 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 GFOD1Q9NXC2 390 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 PCDHB10Q9UN67 800 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 R3HCC1Q9Y3T6 440 aaKnown RBP4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 PRKAB1Q9Y478 270 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 PCDHA11Q9Y5I1 949 aa4.24□□□□□ -1.73
FNDC3B-209ENST00000478016 WDR62O43379 1518 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 NEFHP12036 1026 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 ITGA4P13612 1032 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 CD247P20963 164 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 ATICP31939 592 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 GNALP38405 381 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms