RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 SYN1P17600 705 aa7.17□□□□□ -1.26
LMBR1-216ENST00000477983 PRR5P85299 388 aa7.17□□□□□ -1.26
LMBR1-216ENST00000477983 PPP2R5DQ14738 602 aa7.17□□□□□ -1.26
LMBR1-216ENST00000477983 FEZF2Q8TBJ5 459 aa7.17□□□□□ -1.26
LMBR1-216ENST00000477983 SHDQ96IW2 340 aa7.17□□□□□ -1.26
LMBR1-216ENST00000477983 ZC3H12DA2A288 527 aaKnown RBP7.16□□□□□ -1.26
LMBR1-216ENST00000477983 VAMP4O75379 141 aa7.16□□□□□ -1.26
LMBR1-216ENST00000477983 PPM1BO75688 479 aa7.16□□□□□ -1.26
LMBR1-216ENST00000477983 EPHX1P07099 455 aa7.16□□□□□ -1.26
LMBR1-216ENST00000477983 ATF2P15336 505 aa7.16□□□□□ -1.26
LMBR1-216ENST00000477983 CASP7P55210 303 aa7.16□□□□□ -1.26
LMBR1-216ENST00000477983 FOXO4P98177 505 aa7.16□□□□□ -1.26
LMBR1-216ENST00000477983 GRB10Q13322 594 aa7.16□□□□□ -1.26
LMBR1-216ENST00000477983 ADCY4Q8NFM4 1077 aa7.16□□□□□ -1.26
LMBR1-216ENST00000477983 KRTAP17-1Q9BYP8 105 aa7.16□□□□□ -1.26
LMBR1-216ENST00000477983 SUSD2Q9UGT4 822 aa7.16□□□□□ -1.26
LMBR1-216ENST00000477983 PCDHB10Q9UN67 800 aa7.16□□□□□ -1.26
LMBR1-216ENST00000477983 PLA2G2DQ9UNK4 145 aa7.16□□□□□ -1.26
LMBR1-216ENST00000477983 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.16□□□□□ -1.26
LMBR1-216ENST00000477983 PPP1R11O60927 126 aaPredicted RBP7.15□□□□□ -1.26
LMBR1-216ENST00000477983 NCAM1P13591 858 aa7.15□□□□□ -1.26
LMBR1-216ENST00000477983 TACR1P25103 407 aa7.15□□□□□ -1.26
LMBR1-216ENST00000477983 LIMS1P48059 325 aa7.15□□□□□ -1.26
LMBR1-216ENST00000477983 HTRA3P83110 453 aa7.15□□□□□ -1.26
LMBR1-216ENST00000477983 VWA3BQ502W6 1294 aa7.15□□□□□ -1.26
LMBR1-216ENST00000477983 ADAT2Q7Z6V5 191 aaKnown RBP7.15□□□□□ -1.26
LMBR1-216ENST00000477983 ZNF513Q8N8E2 541 aaPredicted RBP7.15□□□□□ -1.26
LMBR1-216ENST00000477983 FNIP1Q8TF40 1166 aa7.15□□□□□ -1.26
LMBR1-216ENST00000477983 MRRFQ96E11 262 aaKnown RBP7.15□□□□□ -1.26
LMBR1-216ENST00000477983 CGGBP1Q9UFW8 167 aaPredicted RBP7.15□□□□□ -1.26
LMBR1-216ENST00000477983 C2orf71A6NGG8 1288 aa7.14□□□□□ -1.27
LMBR1-216ENST00000477983 PLA2G1BP04054 148 aaKnown RBP7.14□□□□□ -1.27
LMBR1-216ENST00000477983 HDLBPQ00341 1268 aaKnown RBP7.14□□□□□ -1.27
LMBR1-216ENST00000477983 AMPD2Q01433 879 aa7.14□□□□□ -1.27
LMBR1-216ENST00000477983 FRMD5Q7Z6J6 570 aa7.14□□□□□ -1.27
LMBR1-216ENST00000477983 NT5DC4Q86YG4 428 aa7.14□□□□□ -1.27
LMBR1-216ENST00000477983 SYT8Q8NBV8 401 aa7.14□□□□□ -1.27
LMBR1-216ENST00000477983 TSPAN17Q96FV3 270 aa7.14□□□□□ -1.27
LMBR1-216ENST00000477983 SEC16BQ96JE7 1060 aa7.14□□□□□ -1.27
LMBR1-216ENST00000477983 FGD4Q96M96 766 aa7.14□□□□□ -1.27
LMBR1-216ENST00000477983 TEPSINQ96N21 525 aa7.14□□□□□ -1.27
LMBR1-216ENST00000477983 MTA3Q9BTC8 594 aa7.14□□□□□ -1.27
LMBR1-216ENST00000477983 BACE2Q9Y5Z0 518 aa7.14□□□□□ -1.27
LMBR1-216ENST00000477983 UNC13AQ9UPW8 1703 aa7.13□□□□□ -1.27
LMBR1-216ENST00000477983 ASGR2P07307 311 aa7.13□□□□□ -1.27
LMBR1-216ENST00000477983 NASPP49321 788 aaPredicted RBP7.13□□□□□ -1.27
LMBR1-216ENST00000477983 SEPHS1P49903 392 aa7.13□□□□□ -1.27
LMBR1-216ENST00000477983 SLURP1P55000 103 aa7.13□□□□□ -1.27
LMBR1-216ENST00000477983 SAPCD2Q86UD0 394 aa7.13□□□□□ -1.27
LMBR1-216ENST00000477983 ZDHHC14Q8IZN3 488 aa7.13□□□□□ -1.27
LMBR1-216ENST00000477983 LZTR1Q8N653 840 aa7.13□□□□□ -1.27
LMBR1-216ENST00000477983 NETO2Q8NC67 525 aa7.13□□□□□ -1.27
LMBR1-216ENST00000477983 DBR1Q9UK59 544 aaKnown RBP7.13□□□□□ -1.27
LMBR1-216ENST00000477983 TRBV23OR9-2A0A075B6M9 112 aa7.12□□□□□ -1.27
LMBR1-216ENST00000477983 SH3D21A4FU49 640 aa7.12□□□□□ -1.27
LMBR1-216ENST00000477983 STXBP3O00186 592 aa7.12□□□□□ -1.27
LMBR1-216ENST00000477983 PAMP19021 973 aa7.12□□□□□ -1.27
LMBR1-216ENST00000477983 KCNC1P48547 511 aa7.12□□□□□ -1.27
LMBR1-216ENST00000477983 RBM10P98175 930 aaKnown RBP7.12□□□□□ -1.27
LMBR1-216ENST00000477983 SLC9A5Q14940 896 aa7.12□□□□□ -1.27
LMBR1-216ENST00000477983 DPY19L1Q2PZI1 675 aa7.12□□□□□ -1.27
LMBR1-216ENST00000477983 SKOR2Q2VWA4 1001 aaPredicted RBP7.12□□□□□ -1.27
LMBR1-216ENST00000477983 B3GNT8Q7Z7M8 397 aa7.12□□□□□ -1.27
LMBR1-216ENST00000477983 CPA5Q8WXQ8 436 aa7.12□□□□□ -1.27
LMBR1-216ENST00000477983 KIAA1522Q9P206 1035 aaPredicted RBP7.12□□□□□ -1.27
LMBR1-216ENST00000477983 FBLN5Q9UBX5 448 aa7.12□□□□□ -1.27
LMBR1-216ENST00000477983 ANKRD34BA5PLL1 514 aa7.11□□□□□ -1.27
LMBR1-216ENST00000477983 ZFYVE27Q5T4F4 411 aa7.11□□□□□ -1.27
LMBR1-216ENST00000477983 C9orf131Q5VYM1 1079 aa7.11□□□□□ -1.27
LMBR1-216ENST00000477983 KIAA1211LQ6NV74 962 aa7.11□□□□□ -1.27
LMBR1-216ENST00000477983 CABP7Q86V35 215 aa7.11□□□□□ -1.27
LMBR1-216ENST00000477983 CPNE8Q86YQ8 564 aa7.11□□□□□ -1.27
LMBR1-216ENST00000477983 ALG3Q92685 438 aa7.11□□□□□ -1.27
LMBR1-216ENST00000477983 COPS5Q92905 334 aa7.11□□□□□ -1.27
LMBR1-216ENST00000477983 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.11□□□□□ -1.27
LMBR1-216ENST00000477983 PMF1-BGLAPU3KQ54 211 aa7.11□□□□□ -1.27
LMBR1-216ENST00000477983 UNCXA6NJT0 531 aa7.1□□□□□ -1.27
LMBR1-216ENST00000477983 ZBTB7AO95365 584 aa7.1□□□□□ -1.27
LMBR1-216ENST00000477983 DLX2Q07687 328 aaPredicted RBP7.1□□□□□ -1.27
LMBR1-216ENST00000477983 PPP2R5EQ16537 467 aa7.1□□□□□ -1.27
LMBR1-216ENST00000477983 VHLLQ6RSH7 139 aa7.1□□□□□ -1.27
LMBR1-216ENST00000477983 LIPIQ6XZB0 460 aa7.1□□□□□ -1.27
LMBR1-216ENST00000477983 FAM169BQ8N8A8 192 aa7.1□□□□□ -1.27
LMBR1-216ENST00000477983 PEX11GQ96HA9 241 aa7.1□□□□□ -1.27
LMBR1-216ENST00000477983 NUDT5Q9UKK9 219 aa7.1□□□□□ -1.27
LMBR1-216ENST00000477983 STRIP2Q9ULQ0 834 aa7.1□□□□□ -1.27
LMBR1-216ENST00000477983 FAN1Q9Y2M0 1017 aa7.1□□□□□ -1.27
LMBR1-216ENST00000477983 SUGT1Q9Y2Z0 365 aa7.1□□□□□ -1.27
LMBR1-216ENST00000477983 EMC9Q9Y3B6 208 aa7.1□□□□□ -1.27
LMBR1-216ENST00000477983 RWDD3Q9Y3V2 267 aa7.1□□□□□ -1.27
LMBR1-216ENST00000477983 NPHP3-ACAD11A0A0J9YXS1 232 aa7.09□□□□□ -1.27
LMBR1-216ENST00000477983 C7orf72A4D263 438 aa7.09□□□□□ -1.27
LMBR1-216ENST00000477983 CELA3BP08861 270 aa7.09□□□□□ -1.27
LMBR1-216ENST00000477983 MC3RP41968 323 aa7.09□□□□□ -1.27
LMBR1-216ENST00000477983 ZNF143P52747 638 aaPredicted RBP7.09□□□□□ -1.27
LMBR1-216ENST00000477983 ERICH6BQ5W0A0 696 aa7.09□□□□□ -1.27
LMBR1-216ENST00000477983 CPLX3Q8WVH0 158 aa7.09□□□□□ -1.27
LMBR1-216ENST00000477983 MMP19Q99542 508 aa7.09□□□□□ -1.27
LMBR1-216ENST00000477983 TGIF2Q9GZN2 237 aa7.09□□□□□ -1.27
LMBR1-216ENST00000477983 APEX2Q9UBZ4 518 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms