RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 SEZ6LQ9BYH1 1024 aa13.84□□□□□ -0.19
CPSF7-211ENST00000477890 WDR11Q9BZH6 1224 aa13.84□□□□□ -0.19
CPSF7-211ENST00000477890 MTIF3Q9H2K0 278 aaKnown RBP13.84□□□□□ -0.19
CPSF7-211ENST00000477890 TCP11L1Q9NUJ3 509 aa13.84□□□□□ -0.19
CPSF7-211ENST00000477890 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
CPSF7-211ENST00000477890 PRUNE2Q8WUY3 3088 aa13.83□□□□□ -0.2
CPSF7-211ENST00000477890 TRIM6-TRIM34B2RNG4 842 aa13.83□□□□□ -0.2
CPSF7-211ENST00000477890 PDHBP11177 359 aa13.83□□□□□ -0.2
CPSF7-211ENST00000477890 CALML3P27482 149 aa13.83□□□□□ -0.2
CPSF7-211ENST00000477890 NMIQ13287 307 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-211ENST00000477890 RAB30Q15771 203 aa13.83□□□□□ -0.2
CPSF7-211ENST00000477890 SLC30A10Q6XR72 485 aa13.83□□□□□ -0.2
CPSF7-211ENST00000477890 OTOP2Q7RTS6 562 aa13.83□□□□□ -0.2
CPSF7-211ENST00000477890 ZNF589Q86UQ0 364 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-211ENST00000477890 PPM1EQ8WY54 764 aa13.83□□□□□ -0.2
CPSF7-211ENST00000477890 NOC4LQ9BVI4 516 aaKnown RBP13.83□□□□□ -0.2
CPSF7-211ENST00000477890 WNT8AQ9H1J5 351 aa13.83□□□□□ -0.2
CPSF7-211ENST00000477890 PRDM12Q9H4Q4 367 aa13.83□□□□□ -0.2
CPSF7-211ENST00000477890 MSRAQ9UJ68 235 aa13.83□□□□□ -0.2
CPSF7-211ENST00000477890 ZMYM6O95789 1325 aa13.83□□□□□ -0.2
CPSF7-211ENST00000477890 LOC102724159A0A0B4J2E5 919 aa13.82□□□□□ -0.2
CPSF7-211ENST00000477890 MYL3P08590 195 aa13.82□□□□□ -0.2
CPSF7-211ENST00000477890 HDAC1Q13547 482 aaPredicted RBP13.82□□□□□ -0.2
CPSF7-211ENST00000477890 PWP2Q15269 919 aaKnown RBP13.82□□□□□ -0.2
CPSF7-211ENST00000477890 RNF207Q6ZRF8 634 aa13.82□□□□□ -0.2
CPSF7-211ENST00000477890 MFSD6Q6ZSS7 791 aa13.82□□□□□ -0.2
CPSF7-211ENST00000477890 OR6J1Q8NGC5 347 aa13.82□□□□□ -0.2
CPSF7-211ENST00000477890 CLEC4DQ8WXI8 215 aa13.82□□□□□ -0.2
CPSF7-211ENST00000477890 SYMPKQ92797 1274 aaKnown RBP13.82□□□□□ -0.2
CPSF7-211ENST00000477890 RILPL2Q969X0 211 aa13.82□□□□□ -0.2
CPSF7-211ENST00000477890 ALDH8A1Q9H2A2 487 aaPredicted RBP13.82□□□□□ -0.2
CPSF7-211ENST00000477890 NKX2-4Q9H2Z4 354 aa13.82□□□□□ -0.2
CPSF7-211ENST00000477890 POLR3EQ9NVU0 708 aa13.82□□□□□ -0.2
CPSF7-211ENST00000477890 CCDC171Q6TFL3 1326 aa13.82□□□□□ -0.2
CPSF7-211ENST00000477890 CPT1AP50416 773 aa13.81□□□□□ -0.2
CPSF7-211ENST00000477890 RPS6P62753 249 aaKnown RBP13.81□□□□□ -0.2
CPSF7-211ENST00000477890 PDE4DQ08499 809 aa13.81□□□□□ -0.2
CPSF7-211ENST00000477890 ZNF543Q08ER8 600 aa13.81□□□□□ -0.2
CPSF7-211ENST00000477890 AKNAD1Q5T1N1 836 aa13.81□□□□□ -0.2
CPSF7-211ENST00000477890 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
CPSF7-211ENST00000477890 RPUSD2Q8IZ73 545 aaKnown RBP13.81□□□□□ -0.2
CPSF7-211ENST00000477890 SCLYQ96I15 445 aa13.81□□□□□ -0.2
CPSF7-211ENST00000477890 TTC14Q96N46 770 aa13.81□□□□□ -0.2
CPSF7-211ENST00000477890 MPHOSPH6Q99547 160 aaKnown RBP13.81□□□□□ -0.2
CPSF7-211ENST00000477890 LNPKQ9C0E8 428 aa13.81□□□□□ -0.2
CPSF7-211ENST00000477890 PRDM6Q9NQX0 595 aa13.81□□□□□ -0.2
CPSF7-211ENST00000477890 TRMT13Q9NUP7 481 aaKnown RBP13.81□□□□□ -0.2
CPSF7-211ENST00000477890 PNMA2Q9UL42 364 aa13.81□□□□□ -0.2
CPSF7-211ENST00000477890 RBM47A0AV96 593 aaKnown RBP13.8□□□□□ -0.2
CPSF7-211ENST00000477890 ZBBXA8MT70 800 aa13.8□□□□□ -0.2
CPSF7-211ENST00000477890 SNHG28P0DPA3 235 aa13.8□□□□□ -0.2
CPSF7-211ENST00000477890 PCP11498 1178 aaKnown RBP13.8□□□□□ -0.2
CPSF7-211ENST00000477890 CYP2C9P11712 490 aa13.8□□□□□ -0.2
CPSF7-211ENST00000477890 PURAQ00577 322 aaKnown RBP13.8□□□□□ -0.2
CPSF7-211ENST00000477890 BRDTQ58F21 947 aaPredicted RBP13.8□□□□□ -0.2
CPSF7-211ENST00000477890 TBC1D10CQ8IV04 446 aa13.8□□□□□ -0.2
CPSF7-211ENST00000477890 ZKSCAN3Q9BRR0 538 aa13.8□□□□□ -0.2
CPSF7-211ENST00000477890 MTG1Q9BT17 334 aaPredicted RBP13.8□□□□□ -0.2
CPSF7-211ENST00000477890 SLC28A3Q9HAS3 691 aa13.8□□□□□ -0.2
CPSF7-211ENST00000477890 GPHNQ9NQX3 736 aaPredicted RBP13.8□□□□□ -0.2
CPSF7-211ENST00000477890 YBX2Q9Y2T7 364 aaKnown RBP13.8□□□□□ -0.2
CPSF7-211ENST00000477890 SLC4A7Q9Y6M7 1214 aa13.8□□□□□ -0.2
CPSF7-211ENST00000477890 TNKSO95271 1327 aa13.8□□□□□ -0.2
CPSF7-211ENST00000477890 WDR19Q8NEZ3 1342 aa13.8□□□□□ -0.2
CPSF7-211ENST00000477890 VCANP13611 3396 aa13.8□□□□□ -0.2
CPSF7-211ENST00000477890 SCN5AQ14524 2016 aa13.8□□□□□ -0.2
CPSF7-211ENST00000477890 SUPT20HL2P0C7V6 817 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 GOLGA8HP0CJ92 632 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 IGFBP4P22692 258 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 RABGGTBP53611 331 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 MFAP1P55081 439 aaKnown RBP13.79□□□□□ -0.2
CPSF7-211ENST00000477890 PPP2R5BQ15173 497 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 USH1GQ495M9 461 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 FAM47CQ5HY64 1035 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 TJAP1Q5JTD0 557 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 DNERQ8NFT8 737 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 SCFD2Q8WU76 684 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 ESR2Q92731 530 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 RNF41Q9H4P4 317 aaPredicted RBP13.79□□□□□ -0.2
CPSF7-211ENST00000477890 SCN10AQ9Y5Y9 1956 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 NEDD4P46934 1319 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 RAD50Q92878 1312 aa13.79□□□□□ -0.2
CPSF7-211ENST00000477890 ZNF213O14771 459 aa13.78□□□□□ -0.2
CPSF7-211ENST00000477890 NKRFO15226 690 aaKnown RBP eCLIP13.78□□□□□ -0.2
CPSF7-211ENST00000477890 SDSP20132 328 aa13.78□□□□□ -0.2
CPSF7-211ENST00000477890 EDNRBP24530 442 aa13.78□□□□□ -0.2
CPSF7-211ENST00000477890 ADGRE1Q14246 886 aa13.78□□□□□ -0.2
CPSF7-211ENST00000477890 CCDC85BQ15834 202 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-211ENST00000477890 NBPF20Q3BBV1 942 aa13.78□□□□□ -0.2
CPSF7-211ENST00000477890 GPATCH4Q5T3I0 446 aaKnown RBP13.78□□□□□ -0.2
CPSF7-211ENST00000477890 B4GALNT3Q6L9W6 998 aa13.78□□□□□ -0.2
CPSF7-211ENST00000477890 DEFB128Q7Z7B8 93 aa13.78□□□□□ -0.2
CPSF7-211ENST00000477890 PPP1R13LQ8WUF5 828 aa13.78□□□□□ -0.2
CPSF7-211ENST00000477890 COPS5Q92905 334 aa13.78□□□□□ -0.2
CPSF7-211ENST00000477890 VWCEQ96DN2 955 aa13.78□□□□□ -0.2
CPSF7-211ENST00000477890 UBA5Q9GZZ9 404 aa13.78□□□□□ -0.2
CPSF7-211ENST00000477890 CPVLQ9H3G5 476 aa13.78□□□□□ -0.2
CPSF7-211ENST00000477890 LAMA4Q16363 1823 aa13.78□□□□□ -0.2
CPSF7-211ENST00000477890 B4DLN1 442 aa13.77□□□□□ -0.21
CPSF7-211ENST00000477890 PFKMP08237 780 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms