RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 FBXO22Q8NEZ5 403 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 ATOH1Q92858 354 aaPredicted RBP8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 CTAGE1Q96RT6 745 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 POP1Q99575 1024 aaKnown RBP8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 API5Q9BZZ5 524 aaKnown RBP8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 IRF2BPLQ9H1B7 796 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 SMC4Q9NTJ3 1288 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 POLR3EQ9NVU0 708 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 TLR7Q9NYK1 1049 aaKnown RBP8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 CDK5RAP2Q96SN8 1893 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 F5H6K3 240 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 H3BNC9 293 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 MBTPS2O43462 519 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 NBNO60934 754 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 NDUFB10O96000 172 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 CXCL10P02778 98 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 AVPR2P30518 371 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 VCPP55072 806 aaKnown RBP8.83□□□□□ -1
SPTLC1-205ENST00000477888 ZXDAP98168 799 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 PTPN11Q06124 597 aaPredicted RBP8.83□□□□□ -1
SPTLC1-205ENST00000477888 KLRC3Q07444 240 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 DLX2Q07687 328 aaPredicted RBP8.83□□□□□ -1
SPTLC1-205ENST00000477888 FAM47CQ5HY64 1035 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 C12orf60Q5U649 245 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 CNKSR3Q6P9H4 555 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 EP400NLQ6ZTU2 488 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 KIAA1211Q6ZU35 1233 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 EEPD1Q7L9B9 569 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 FBXO16Q8IX29 292 aaPredicted RBP8.83□□□□□ -1
SPTLC1-205ENST00000477888 MORC4Q8TE76 937 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 PPP1R13LQ8WUF5 828 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 MTG1Q9BT17 334 aaPredicted RBP8.83□□□□□ -1
SPTLC1-205ENST00000477888 A1CFQ9NQ94 594 aaKnown RBP8.83□□□□□ -1
SPTLC1-205ENST00000477888 CLDND1Q9NY35 253 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 INSL6Q9Y581 213 aa8.83□□□□□ -1
SPTLC1-205ENST00000477888 H0Y858 1186 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 RBAK-RBAKDNI3L0D1 243 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 NCK2O43639 380 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 KRT37O76014 449 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 MYL3P08590 195 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 ID4P47928 161 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 CPT1AP50416 773 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 HTRA4P83105 476 aaPredicted RBP8.82□□□□□ -1
SPTLC1-205ENST00000477888 EPC2Q52LR7 807 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 SLC9C2Q5TAH2 1124 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 C16orf86Q6ZW13 317 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 LCORLQ8N3X6 602 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 CAGE1Q8TC20 777 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 SP7Q8TDD2 431 aaPredicted RBP8.82□□□□□ -1
SPTLC1-205ENST00000477888 AFAP1L1Q8TED9 768 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 KIFC2Q96AC6 838 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 EAF2Q96CJ1 260 aaPredicted RBP8.82□□□□□ -1
SPTLC1-205ENST00000477888 FSD1Q9BTV5 496 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 CCDC8Q9H0W5 538 aaPredicted RBP8.82□□□□□ -1
SPTLC1-205ENST00000477888 NSUN3Q9H649 340 aaKnown RBP8.82□□□□□ -1
SPTLC1-205ENST00000477888 ACAD9Q9H845 621 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 MRS2Q9HD23 443 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 VTA1Q9NP79 307 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 TLR9Q9NR96 1032 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 HOMER2Q9NSB8 354 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 TRPC6Q9Y210 931 aa8.82□□□□□ -1
SPTLC1-205ENST00000477888 RIF1Q5UIP0 2472 aaKnown RBP8.82□□□□□ -1
SPTLC1-205ENST00000477888 ZFHX4Q86UP3 3567 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 DMDP11532 3685 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 CYP2D7A0A087X1C5 515 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 TCRBV5S4A2TA0A5A2 114 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 PRR23AA6NEV1 266 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 STXBP3O00186 592 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 PRKAB2O43741 272 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 EFCAB14O75071 495 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 PARNO95453 639 aaKnown RBP8.81□□□□□ -1
SPTLC1-205ENST00000477888 GNAI2P04899 355 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 SELPP16109 830 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 PDE6AP16499 860 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 FAM117BQ6P1L5 589 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 ASIC4Q96FT7 647 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 WDR11Q9BZH6 1224 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 GPHNQ9NQX3 736 aaPredicted RBP8.81□□□□□ -1
SPTLC1-205ENST00000477888 ATP8A2Q9NTI2 1148 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 NYAP2Q9P242 653 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 DAXXQ9UER7 740 aaPredicted RBP8.81□□□□□ -1
SPTLC1-205ENST00000477888 COG6Q9Y2V7 657 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 CTDP1Q9Y5B0 961 aaPredicted RBP8.81□□□□□ -1
SPTLC1-205ENST00000477888 MYH1P12882 1939 aa8.81□□□□□ -1
SPTLC1-205ENST00000477888 ZNF532Q9HCE3 1301 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 RBM47A0AV96 593 aaKnown RBP8.8□□□□□ -1
SPTLC1-205ENST00000477888 A6NJR5 290 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 LOC730098B7Z3J9 87 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 E9PSI1 815 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 KPNA6O60684 536 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 NBL1P41271 181 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 NUBP1P53384 320 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 RBL2Q08999 1139 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 SIGLEC14Q08ET2 396 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 SMAD4Q13485 552 aaKnown RBP8.8□□□□□ -1
SPTLC1-205ENST00000477888 GPM6BQ13491 265 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 IKBKEQ14164 716 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 CBX2Q14781 532 aaPredicted RBP8.8□□□□□ -1
SPTLC1-205ENST00000477888 CLUL1Q15846 466 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 PTGISQ16647 500 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms