RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 TESK1Q15569 626 aa6.84□□□□□ -1.31
SMNDC1-205ENST00000477763 E4F1Q66K89 784 aaPredicted RBP6.84□□□□□ -1.31
SMNDC1-205ENST00000477763 IQCEQ6IPM2 695 aa6.84□□□□□ -1.31
SMNDC1-205ENST00000477763 GIMAP6Q6P9H5 292 aa6.84□□□□□ -1.31
SMNDC1-205ENST00000477763 NUP43Q8NFH3 380 aa6.84□□□□□ -1.31
SMNDC1-205ENST00000477763 DNAJC7Q99615 494 aa6.84□□□□□ -1.31
SMNDC1-205ENST00000477763 A0A1W2PQ27 194 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 A0A1W2PQ64 194 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 A0A1W2PQC6 194 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 A0A1W2PQD8 194 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 HRKO00198 91 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 SNRPB2P08579 225 aaKnown RBP6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 PLS3P13797 630 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 CYP4F8P98187 520 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 MVKQ03426 396 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 MLANAQ16655 118 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 ACBD5Q5T8D3 534 aaPredicted RBP6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 PRR23BQ6ZRT6 265 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 FRS2Q8WU20 508 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 AARSD1Q9BTE6 412 aaKnown RBP6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 GPRC5CQ9NQ84 441 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 PDLIM7Q9NR12 457 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 CLEC1BQ9P126 229 aa6.83□□□□□ -1.32
SMNDC1-205ENST00000477763 OR14I1A6ND48 311 aa6.82□□□□□ -1.32
SMNDC1-205ENST00000477763 SMARCA5O60264 1052 aaPredicted RBP6.82□□□□□ -1.32
SMNDC1-205ENST00000477763 FARP2O94887 1054 aaPredicted RBP6.82□□□□□ -1.32
SMNDC1-205ENST00000477763 FGFR1P11362 822 aa6.82□□□□□ -1.32
SMNDC1-205ENST00000477763 MAP4K2Q12851 820 aa6.82□□□□□ -1.32
SMNDC1-205ENST00000477763 KREMEN2Q8NCW0 462 aa6.82□□□□□ -1.32
SMNDC1-205ENST00000477763 KCTD13Q8WZ19 329 aa6.82□□□□□ -1.32
SMNDC1-205ENST00000477763 SPATA9Q9BWV2 254 aa6.82□□□□□ -1.32
SMNDC1-205ENST00000477763 EPB41L4BQ9H329 900 aa6.82□□□□□ -1.32
SMNDC1-205ENST00000477763 NSUN3Q9H649 340 aaKnown RBP6.82□□□□□ -1.32
SMNDC1-205ENST00000477763 ZNF552Q9H707 407 aaPredicted RBP6.82□□□□□ -1.32
SMNDC1-205ENST00000477763 TNFRSF12AQ9NP84 129 aa6.82□□□□□ -1.32
SMNDC1-205ENST00000477763 ARHGEF4Q9NR80 690 aa6.82□□□□□ -1.32
SMNDC1-205ENST00000477763 NPHS1O60500 1241 aa6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 PDE6BP35913 854 aa6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 GRIA2P42262 883 aa6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 GALK1P51570 392 aa6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 SSRP1Q08945 709 aaKnown RBP6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 MESP2Q0VG99 397 aa6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 KCNAB2Q13303 367 aa6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 KIR3DS1Q14943 382 aa6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 SLC35F1Q5T1Q4 408 aa6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 ADGRF1Q5T601 910 aa6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 CPNE8Q86YQ8 564 aa6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 SIRT2Q8IXJ6 389 aa6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 FBXO15Q8NCQ5 510 aaPredicted RBP6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 C1orf159Q96HA4 380 aa6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 DCP1AQ9NPI6 582 aaPredicted RBP6.81□□□□□ -1.32
SMNDC1-205ENST00000477763 TRAV20A0A0B4J274 112 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 C7orf72A4D263 438 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 ABLIM1O14639 778 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 MEFVO15553 781 aaPredicted RBP6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 SRGAP3O43295 1099 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 PEX10O60683 326 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 MPOP05164 745 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 MSL3P1P0C860 447 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 ECI1P42126 302 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 KCNJ6P48051 423 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 YBX1P67809 324 aaKnown RBP6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 TMEM62Q0P6H9 643 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 SF1Q15637 639 aaKnown RBP6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 LONRF2Q1L5Z9 754 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 SPATC1Q76KD6 591 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 TMEM145Q8NBT3 493 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 BHLHE22Q8NFJ8 381 aaPredicted RBP6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 FAM84AQ96KN4 292 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 SLC26A8Q96RN1 970 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 DIRC2Q96SL1 478 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 IER2Q9BTL4 223 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 PFDN2Q9UHV9 154 aa6.8□□□□□ -1.32
SMNDC1-205ENST00000477763 KDM2BQ8NHM5 1336 aa6.79□□□□□ -1.32
SMNDC1-205ENST00000477763 ADCY3O60266 1144 aa6.79□□□□□ -1.32
SMNDC1-205ENST00000477763 DLX3O60479 287 aa6.79□□□□□ -1.32
SMNDC1-205ENST00000477763 CANXP27824 592 aaKnown RBP6.79□□□□□ -1.32
SMNDC1-205ENST00000477763 CBX2Q14781 532 aaPredicted RBP6.79□□□□□ -1.32
SMNDC1-205ENST00000477763 NR1I3Q14994 352 aa6.79□□□□□ -1.32
SMNDC1-205ENST00000477763 OLFML2BQ68BL8 750 aa6.79□□□□□ -1.32
SMNDC1-205ENST00000477763 MBLAC2Q68D91 279 aa6.79□□□□□ -1.32
SMNDC1-205ENST00000477763 LILRB2Q8N423 598 aa6.79□□□□□ -1.32
SMNDC1-205ENST00000477763 DIO2Q92813 273 aa6.79□□□□□ -1.32
SMNDC1-205ENST00000477763 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMNDC1-205ENST00000477763 TBX22Q9Y458 520 aa6.79□□□□□ -1.32
SMNDC1-205ENST00000477763 NPFFR2Q9Y5X5 522 aa6.79□□□□□ -1.32
SMNDC1-205ENST00000477763 A0A1W2PQJ5 194 aa6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 CYBBP04839 570 aa6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 PABPC1P11940 636 aaKnown RBP6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 LTBRP36941 435 aa6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 PRSS53Q2L4Q9 553 aa6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 ZC3H12BQ5HYM0 836 aaKnown RBP6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 DENND5AQ6IQ26 1287 aa6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 CCDC103Q8IW40 242 aa6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 PPIL6Q8IXY8 311 aa6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 LZTR1Q8N653 840 aa6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 ZBTB38Q8NAP3 1195 aaPredicted RBP6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 THAP3Q8WTV1 239 aaPredicted RBP6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 OSBP2Q969R2 916 aa6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 MTA3Q9BTC8 594 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms