RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 PLXNB2O15031 1838 aa7.7□□□□□ -1.18
LINC00173-202ENST00000477702 CLSPNQ9HAW4 1339 aa7.7□□□□□ -1.18
LINC00173-202ENST00000477702 REV3LO60673 3130 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 TRIM43BA6NCK2 446 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 MAPTP10636 758 aaKnown RBP7.69□□□□□ -1.18
LINC00173-202ENST00000477702 XRCC5P13010 732 aaKnown RBP7.69□□□□□ -1.18
LINC00173-202ENST00000477702 CNGA1P29973 690 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 TFF2Q03403 129 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 TNP2Q05952 138 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 SPP2Q13103 211 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 ADGRE1Q14246 886 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 LBRQ14739 615 aaKnown RBP7.69□□□□□ -1.18
LINC00173-202ENST00000477702 CCDC57Q2TAC2 916 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 TRIM60Q495X7 471 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 GJC2Q5T442 439 aaPredicted RBP7.69□□□□□ -1.18
LINC00173-202ENST00000477702 SAMD5Q5TGI4 173 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 IER5Q5VY09 327 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 HHIPL2Q6UWX4 724 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 RGL4Q8IZJ4 473 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 GPR152Q8TDT2 470 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 TRIM43Q96BQ3 446 aaPredicted RBP7.69□□□□□ -1.18
LINC00173-202ENST00000477702 TIFAQ96CG3 184 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 MRIQ9BWK5 157 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 PUS3Q9BZE2 481 aaKnown RBP7.69□□□□□ -1.18
LINC00173-202ENST00000477702 BRD7Q9NPI1 651 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 PDLIM7Q9NR12 457 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 USP40Q9NVE5 1235 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 DAGLAQ9Y4D2 1042 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 ATRNL1Q5VV63 1379 aa7.69□□□□□ -1.18
LINC00173-202ENST00000477702 PTPRFP10586 1907 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 EFSO43281 561 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 FZD6O60353 706 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 FAM13AO94988 1023 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 ZNF853P0CG23 659 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 CD33P20138 364 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 ITGB8P26012 769 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 RGS3P49796 1198 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 MRE11P49959 708 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 KCNQ1P51787 676 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 HMGCS2P54868 508 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 GAS6Q14393 721 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 HIF1AQ16665 826 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 AKNAD1Q5T1N1 836 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 SLC39A5Q6ZMH5 540 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 SND1Q7KZF4 910 aaKnown RBP eCLIP7.68□□□□□ -1.18
LINC00173-202ENST00000477702 ZSCAN29Q8IWY8 852 aaPredicted RBP7.68□□□□□ -1.18
LINC00173-202ENST00000477702 TSPYL6Q8N831 410 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 SOCS4Q8WXH5 440 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 ZNF775Q96BV0 537 aaPredicted RBP7.68□□□□□ -1.18
LINC00173-202ENST00000477702 MYH16Q9H6N6 1097 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 TXNRD2Q9NNW7 524 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 MAST3O60307 1309 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 CHD7Q9P2D1 2997 aa7.68□□□□□ -1.18
LINC00173-202ENST00000477702 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.67□□□□□ -1.18
LINC00173-202ENST00000477702 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.67□□□□□ -1.18
LINC00173-202ENST00000477702 GRXCR1A8MXD5 290 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 DNM1LO00429 736 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 CTNND1O60716 968 aaKnown RBP7.67□□□□□ -1.18
LINC00173-202ENST00000477702 FAM157BP0CG42 384 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 RGS2P41220 211 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 TLE2Q04725 743 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 DNM1Q05193 864 aaKnown RBP7.67□□□□□ -1.18
LINC00173-202ENST00000477702 NFX1Q12986 1120 aaKnown RBP7.67□□□□□ -1.18
LINC00173-202ENST00000477702 AAMPQ13685 434 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 RNFT1Q5M7Z0 435 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 ANO1Q5XXA6 986 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 FIGNL1Q6PIW4 674 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 CCAR1Q8IX12 1150 aaKnown RBP7.67□□□□□ -1.18
LINC00173-202ENST00000477702 MICALL1Q8N3F8 863 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 GPRC5AQ8NFJ5 357 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 EDEM1Q92611 657 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 LPAR1Q92633 364 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 USP6NLQ92738 828 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 FERMT2Q96AC1 680 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 P2RX7Q99572 595 aaKnown RBP7.67□□□□□ -1.18
LINC00173-202ENST00000477702 PORCNQ9H237 461 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 C11orf16Q9NQ32 467 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 FLRT1Q9NZU1 646 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 MORF4L1Q9UBU8 362 aa7.67□□□□□ -1.18
LINC00173-202ENST00000477702 DDX20Q9UHI6 824 aaKnown RBP7.67□□□□□ -1.18
LINC00173-202ENST00000477702 DDTLA6NHG4 134 aaPredicted RBP7.66□□□□□ -1.18
LINC00173-202ENST00000477702 A6NHS1 94 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 ADCYAP1R1P41586 468 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 ARSDP51689 593 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 IRX3P78415 501 aaPredicted RBP7.66□□□□□ -1.18
LINC00173-202ENST00000477702 CTBSQ01459 385 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 PABPC4Q13310 644 aaKnown RBP eCLIP7.66□□□□□ -1.18
LINC00173-202ENST00000477702 TRIP4Q15650 581 aaPredicted RBP7.66□□□□□ -1.18
LINC00173-202ENST00000477702 CAVIN4Q5BKX8 364 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 MFSD14CQ5VZR4 134 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 CCDC129Q6ZRS4 1044 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 GPR142Q7Z601 462 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 CMTR1Q8N1G2 835 aaKnown RBP7.66□□□□□ -1.18
LINC00173-202ENST00000477702 TRPV1Q8NER1 839 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 LINS1Q8NG48 757 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 RUNDC1Q96C34 613 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 GMCL1Q96IK5 515 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 APBA2Q99767 749 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 STK31Q9BXU1 1019 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 CWC22Q9HCG8 908 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms