RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 FDPSP14324 419 aaKnown RBP17.64■□□□□ 0.41
SEC13-215ENST00000477547 CTGFP29279 349 aa17.64■□□□□ 0.41
SEC13-215ENST00000477547 PSMC4P43686 418 aa17.64■□□□□ 0.41
SEC13-215ENST00000477547 FOSBP53539 338 aa17.64■□□□□ 0.41
SEC13-215ENST00000477547 KCTD2Q14681 263 aa17.64■□□□□ 0.41
SEC13-215ENST00000477547 TYW1BQ6NUM6 668 aa17.64■□□□□ 0.41
SEC13-215ENST00000477547 NSMFQ6X4W1 530 aa17.64■□□□□ 0.41
SEC13-215ENST00000477547 PLEKHH3Q7Z736 793 aa17.64■□□□□ 0.41
SEC13-215ENST00000477547 FAM184AQ8NB25 1140 aa17.64■□□□□ 0.41
SEC13-215ENST00000477547 CCDC12Q8WUD4 166 aaPredicted RBP17.64■□□□□ 0.41
SEC13-215ENST00000477547 TRIM47Q96LD4 638 aa17.64■□□□□ 0.41
SEC13-215ENST00000477547 ALG1Q9BT22 464 aa17.64■□□□□ 0.41
SEC13-215ENST00000477547 SMC3Q9UQE7 1217 aa17.64■□□□□ 0.41
SEC13-215ENST00000477547 PTCH2Q9Y6C5 1203 aa17.64■□□□□ 0.41
SEC13-215ENST00000477547 PFASO15067 1338 aa17.63■□□□□ 0.41
SEC13-215ENST00000477547 MYH15Q9Y2K3 1946 aa17.63■□□□□ 0.41
SEC13-215ENST00000477547 OPLAHO14841 1288 aa17.63■□□□□ 0.41
SEC13-215ENST00000477547 FCER1AP12319 257 aa17.63■□□□□ 0.41
SEC13-215ENST00000477547 SLC30A10Q6XR72 485 aa17.63■□□□□ 0.41
SEC13-215ENST00000477547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.63■□□□□ 0.41
SEC13-215ENST00000477547 A1CFQ9NQ94 594 aaKnown RBP17.63■□□□□ 0.41
SEC13-215ENST00000477547 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
SEC13-215ENST00000477547 KIF3AQ9Y496 699 aa17.63■□□□□ 0.41
SEC13-215ENST00000477547 XBP1P17861 261 aa17.62■□□□□ 0.41
SEC13-215ENST00000477547 GJB2P29033 226 aa17.62■□□□□ 0.41
SEC13-215ENST00000477547 ADCY7P51828 1080 aa17.62■□□□□ 0.41
SEC13-215ENST00000477547 GRB14Q14449 540 aa17.62■□□□□ 0.41
SEC13-215ENST00000477547 SLC9C1Q4G0N8 1177 aa17.62■□□□□ 0.41
SEC13-215ENST00000477547 CHRDL2Q6WN34 429 aa17.62■□□□□ 0.41
SEC13-215ENST00000477547 MCF2L2Q86YR7 1114 aa17.62■□□□□ 0.41
SEC13-215ENST00000477547 ANKRD35Q8N283 1001 aa17.62■□□□□ 0.41
SEC13-215ENST00000477547 SOCS4Q8WXH5 440 aa17.62■□□□□ 0.41
SEC13-215ENST00000477547 INTS4Q96HW7 963 aaKnown RBP17.62■□□□□ 0.41
SEC13-215ENST00000477547 ESYT2A0FGR8 921 aa17.61■□□□□ 0.41
SEC13-215ENST00000477547 DLL1O00548 723 aa17.61■□□□□ 0.41
SEC13-215ENST00000477547 CFBP00751 764 aa17.61■□□□□ 0.41
SEC13-215ENST00000477547 PTPREP23469 700 aa17.61■□□□□ 0.41
SEC13-215ENST00000477547 ADORA2AP29274 412 aa17.61■□□□□ 0.41
SEC13-215ENST00000477547 RNF207Q6ZRF8 634 aa17.61■□□□□ 0.41
SEC13-215ENST00000477547 ABRAQ8N0Z2 381 aa17.61■□□□□ 0.41
SEC13-215ENST00000477547 CUL5Q93034 780 aa17.61■□□□□ 0.41
SEC13-215ENST00000477547 SHISA4Q96DD7 197 aa17.61■□□□□ 0.41
SEC13-215ENST00000477547 SH3GLB2Q9NR46 395 aa17.61■□□□□ 0.41
SEC13-215ENST00000477547 KIAA1217Q5T5P2 1943 aa17.6■□□□□ 0.41
SEC13-215ENST00000477547 SLC15A5A6NIM6 579 aa17.6■□□□□ 0.41
SEC13-215ENST00000477547 TRIM29Q14134 588 aa17.6■□□□□ 0.41
SEC13-215ENST00000477547 C8orf76Q96K31 380 aa17.6■□□□□ 0.41
SEC13-215ENST00000477547 GJB4Q9NTQ9 266 aa17.6■□□□□ 0.41
SEC13-215ENST00000477547 CYP39A1Q9NYL5 469 aa17.6■□□□□ 0.41
SEC13-215ENST00000477547 SMCO2A6NFE2 343 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 GCOM1H8Y6P7 765 aaPredicted RBP17.59■□□□□ 0.41
SEC13-215ENST00000477547 STRNO43815 780 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 PGK2P07205 417 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 POLR2MP0CAP2 368 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 CALML3P27482 149 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 HOXA13P31271 388 aaPredicted RBP17.59■□□□□ 0.41
SEC13-215ENST00000477547 HSD17B4P51659 736 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 NLRP5P59047 1200 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 RPS6P62753 249 aaKnown RBP17.59■□□□□ 0.41
SEC13-215ENST00000477547 GHRHRQ02643 423 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 BAATQ14032 418 aaPredicted RBP17.59■□□□□ 0.41
SEC13-215ENST00000477547 ARHGEF6Q15052 776 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 UBE2SQ16763 222 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 FAM177A1Q8N128 213 aaPredicted RBP17.59■□□□□ 0.41
SEC13-215ENST00000477547 SH3TC2Q8TF17 1288 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 NUDT12Q9BQG2 462 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 ZMYND12Q9H0C1 365 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 PSTPIP2Q9H939 334 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 C6orf50Q9HD87 102 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 RIC8AQ9NPQ8 531 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 KCNJ14Q9UNX9 436 aa17.59■□□□□ 0.41
SEC13-215ENST00000477547 POTEB2H3BUK9 544 aa17.58■□□□□ 0.4
SEC13-215ENST00000477547 GNRH1P01148 92 aa17.58■□□□□ 0.4
SEC13-215ENST00000477547 PRKCZQ05513 592 aa17.58■□□□□ 0.4
SEC13-215ENST00000477547 MAP2K5Q13163 448 aa17.58■□□□□ 0.4
SEC13-215ENST00000477547 MORN1Q5T089 497 aa17.58■□□□□ 0.4
SEC13-215ENST00000477547 RGS22Q8NE09 1264 aa17.58■□□□□ 0.4
SEC13-215ENST00000477547 TBC1D5Q92609 795 aa17.58■□□□□ 0.4
SEC13-215ENST00000477547 APBA2Q99767 749 aa17.58■□□□□ 0.4
SEC13-215ENST00000477547 PHF20Q9BVI0 1012 aa17.58■□□□□ 0.4
SEC13-215ENST00000477547 MAF1Q9H063 256 aa17.58■□□□□ 0.4
SEC13-215ENST00000477547 GLT8D2Q9H1C3 349 aa17.58■□□□□ 0.4
SEC13-215ENST00000477547 DNAJC25-GNG10A0A024R161 153 aa17.57■□□□□ 0.4
SEC13-215ENST00000477547 PIK3CDO00329 1044 aa17.57■□□□□ 0.4
SEC13-215ENST00000477547 GNA11P29992 359 aa17.57■□□□□ 0.4
SEC13-215ENST00000477547 RGS2P41220 211 aa17.57■□□□□ 0.4
SEC13-215ENST00000477547 MRPL12P52815 198 aaKnown RBP17.57■□□□□ 0.4
SEC13-215ENST00000477547 GUCY1B3Q02153 619 aa17.57■□□□□ 0.4
SEC13-215ENST00000477547 KRT40Q6A162 431 aa17.57■□□□□ 0.4
SEC13-215ENST00000477547 USP17L6PQ6QN14 398 aa17.57■□□□□ 0.4
SEC13-215ENST00000477547 DPP9Q86TI2 863 aa17.57■□□□□ 0.4
SEC13-215ENST00000477547 REXO1Q8N1G1 1221 aaKnown RBP17.57■□□□□ 0.4
SEC13-215ENST00000477547 SAMD3Q8N6K7 520 aa17.57■□□□□ 0.4
SEC13-215ENST00000477547 SPRYD3Q8NCJ5 442 aa17.57■□□□□ 0.4
SEC13-215ENST00000477547 SYTL5Q8TDW5 730 aaPredicted RBP17.57■□□□□ 0.4
SEC13-215ENST00000477547 SRRDQ9UH36 339 aa17.57■□□□□ 0.4
SEC13-215ENST00000477547 GABRQQ9UN88 632 aa17.57■□□□□ 0.4
SEC13-215ENST00000477547 RBM19Q9Y4C8 960 aaKnown RBP17.57■□□□□ 0.4
SEC13-215ENST00000477547 MEIS2O14770 477 aa17.56■□□□□ 0.4
SEC13-215ENST00000477547 HOXD10P28358 340 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms