RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 GRIN2DO15399 1336 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 NEDD4P46934 1319 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 WDR19Q8NEZ3 1342 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 PTPDC1A2A3K4 754 aa13.36□□□□□ -0.27
HDLBP-236ENST00000477477 DUSP28Q4G0W2 176 aa13.36□□□□□ -0.27
HDLBP-236ENST00000477477 RASIP1Q5U651 963 aa13.36□□□□□ -0.27
HDLBP-236ENST00000477477 B4GALNT3Q6L9W6 998 aa13.36□□□□□ -0.27
HDLBP-236ENST00000477477 PSRC1Q6PGN9 363 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-236ENST00000477477 CHD1LQ86WJ1 897 aa13.36□□□□□ -0.27
HDLBP-236ENST00000477477 PLEKHM2Q8IWE5 1019 aa13.36□□□□□ -0.27
HDLBP-236ENST00000477477 ESR2Q92731 530 aa13.36□□□□□ -0.27
HDLBP-236ENST00000477477 SEZ6LQ9BYH1 1024 aa13.36□□□□□ -0.27
HDLBP-236ENST00000477477 LCTP09848 1927 aa13.35□□□□□ -0.27
HDLBP-236ENST00000477477 FOSL2P15408 326 aa13.35□□□□□ -0.27
HDLBP-236ENST00000477477 CALML3P27482 149 aa13.35□□□□□ -0.27
HDLBP-236ENST00000477477 CYP2C18P33260 490 aa13.35□□□□□ -0.27
HDLBP-236ENST00000477477 NT5C2P49902 561 aa13.35□□□□□ -0.27
HDLBP-236ENST00000477477 RNF207Q6ZRF8 634 aa13.35□□□□□ -0.27
HDLBP-236ENST00000477477 WDR11Q9BZH6 1224 aa13.35□□□□□ -0.27
HDLBP-236ENST00000477477 HIPK3Q9H422 1215 aa13.35□□□□□ -0.27
HDLBP-236ENST00000477477 RBM47A0AV96 593 aaKnown RBP13.34□□□□□ -0.27
HDLBP-236ENST00000477477 ZNF213O14771 459 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 B4GALT4O60513 344 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 IGHDP01880 384 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 ACRP10323 421 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 EDNRBP24530 442 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 PSMC6P62333 389 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 RPS6P62753 249 aaKnown RBP13.34□□□□□ -0.27
HDLBP-236ENST00000477477 NUCB1Q02818 461 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 GRIN2CQ14957 1233 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 GPATCH4Q5T3I0 446 aaKnown RBP13.34□□□□□ -0.27
HDLBP-236ENST00000477477 ZNF365Q70YC5 407 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 DGKHQ86XP1 1220 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 TIFAQ96CG3 184 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 ZKSCAN3Q9BRR0 538 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 COL25A1Q9BXS0 654 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-236ENST00000477477 IL23AQ9NPF7 189 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 DIAPH3Q9NSV4 1193 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 UMODL1Q5DID0 1318 aa13.34□□□□□ -0.27
HDLBP-236ENST00000477477 GOLGA8HP0CJ92 632 aa13.33□□□□□ -0.28
HDLBP-236ENST00000477477 CWC27Q6UX04 472 aaKnown RBP13.33□□□□□ -0.28
HDLBP-236ENST00000477477 IQCA1Q86XH1 822 aa13.33□□□□□ -0.28
HDLBP-236ENST00000477477 DNERQ8NFT8 737 aa13.33□□□□□ -0.28
HDLBP-236ENST00000477477 HERVK_113Q902F9 699 aa13.33□□□□□ -0.28
HDLBP-236ENST00000477477 NOC4LQ9BVI4 516 aaKnown RBP13.33□□□□□ -0.28
HDLBP-236ENST00000477477 PBX4Q9BYU1 374 aa13.33□□□□□ -0.28
HDLBP-236ENST00000477477 TRPV6Q9H1D0 765 aa13.33□□□□□ -0.28
HDLBP-236ENST00000477477 ZNF576Q9H609 170 aa13.33□□□□□ -0.28
HDLBP-236ENST00000477477 POLR3EQ9NVU0 708 aa13.33□□□□□ -0.28
HDLBP-236ENST00000477477 PRUNE2Q8WUY3 3088 aa13.33□□□□□ -0.28
HDLBP-236ENST00000477477 GRXCR1A8MXD5 290 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 HIP1O00291 1037 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 KDM4AO75164 1064 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 PBX2P40425 430 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 CPT1AP50416 773 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 CCL23P55773 120 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 PURAQ00577 322 aaKnown RBP13.32□□□□□ -0.28
HDLBP-236ENST00000477477 PDE4DQ08499 809 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 USH1GQ495M9 461 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 CCDC178Q5BJE1 867 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 PNMA1Q8ND90 353 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 OR6J1Q8NGC5 347 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 YTHDC1Q96MU7 727 aaKnown RBP13.32□□□□□ -0.28
HDLBP-236ENST00000477477 MPHOSPH6Q99547 160 aaKnown RBP13.32□□□□□ -0.28
HDLBP-236ENST00000477477 DSCC1Q9BVC3 393 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 UBA5Q9GZZ9 404 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 WNT8AQ9H1J5 351 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 ALDH8A1Q9H2A2 487 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-236ENST00000477477 MTIF3Q9H2K0 278 aaKnown RBP13.32□□□□□ -0.28
HDLBP-236ENST00000477477 CPVLQ9H3G5 476 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 KAT14Q9H8E8 782 aa13.32□□□□□ -0.28
HDLBP-236ENST00000477477 B4E1Z4 1266 aa13.31□□□□□ -0.28
HDLBP-236ENST00000477477 NKRFO15226 690 aaKnown RBP eCLIP13.31□□□□□ -0.28
HDLBP-236ENST00000477477 FGBP02675 491 aa13.31□□□□□ -0.28
HDLBP-236ENST00000477477 CDC37Q16543 378 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-236ENST00000477477 RGS22Q8NE09 1264 aa13.31□□□□□ -0.28
HDLBP-236ENST00000477477 EXOC6Q8TAG9 804 aa13.31□□□□□ -0.28
HDLBP-236ENST00000477477 SCFD2Q8WU76 684 aa13.31□□□□□ -0.28
HDLBP-236ENST00000477477 ANKS1AQ92625 1134 aa13.31□□□□□ -0.28
HDLBP-236ENST00000477477 CXXC1Q9P0U4 656 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-236ENST00000477477 RAD50Q92878 1312 aa13.31□□□□□ -0.28
HDLBP-236ENST00000477477 VCANP13611 3396 aa13.31□□□□□ -0.28
HDLBP-236ENST00000477477 LAMA4Q16363 1823 aa13.3□□□□□ -0.28
HDLBP-236ENST00000477477 B4DLN1 442 aa13.3□□□□□ -0.28
HDLBP-236ENST00000477477 MYL3P08590 195 aa13.3□□□□□ -0.28
HDLBP-236ENST00000477477 MRPL12P52815 198 aaKnown RBP13.3□□□□□ -0.28
HDLBP-236ENST00000477477 RAB30Q15771 203 aa13.3□□□□□ -0.28
HDLBP-236ENST00000477477 IMMTQ16891 758 aaKnown RBP13.3□□□□□ -0.28
HDLBP-236ENST00000477477 ASPRV1Q53RT3 343 aa13.3□□□□□ -0.28
HDLBP-236ENST00000477477 BRDTQ58F21 947 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-236ENST00000477477 OTOP2Q7RTS6 562 aa13.3□□□□□ -0.28
HDLBP-236ENST00000477477 ENAHQ8N8S7 591 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-236ENST00000477477 ZSCAN10Q96SZ4 725 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-236ENST00000477477 MTG1Q9BT17 334 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-236ENST00000477477 MAF1Q9H063 256 aa13.3□□□□□ -0.28
HDLBP-236ENST00000477477 GPHNQ9NQX3 736 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-236ENST00000477477 TRMT13Q9NUP7 481 aaKnown RBP13.3□□□□□ -0.28
HDLBP-236ENST00000477477 TNKSO95271 1327 aa13.3□□□□□ -0.28
HDLBP-236ENST00000477477 ABCB11O95342 1321 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 201.8 ms