RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ARHGEF10LQ9HCE6 1279 aa12.22□□□□□ -0.45
COL27A1-204ENST00000477421 RWDD2AQ9UIY3 292 aa12.22□□□□□ -0.45
COL27A1-204ENST00000477421 TUBE1Q9UJT0 475 aa12.22□□□□□ -0.45
COL27A1-204ENST00000477421 ARHGEF35A5YM69 484 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 BACH1O14867 736 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 CEP104O60308 925 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 EXOC3O60645 756 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 TDP2O95551 362 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 FCER1AP12319 257 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 GYS2P54840 703 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 RASSF7Q02833 373 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 EVX2Q03828 476 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 SF3A3Q12874 501 aaKnown RBP eCLIP12.21□□□□□ -0.454e-12■□□□□ 9.3
COL27A1-204ENST00000477421 KIAA0753Q2KHM9 967 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 ABCB5Q2M3G0 1257 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 EARS2Q5JPH6 523 aaKnown RBP12.21□□□□□ -0.45
COL27A1-204ENST00000477421 MIGA2Q7L4E1 593 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 PTF1AQ7RTS3 328 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 POTEDQ86YR6 584 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 NLGN1Q8N2Q7 840 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 FAM212AQ96EL1 285 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 NOX5Q96PH1 765 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 C3P01024 1663 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 SFI1A8K8P3 1242 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 SRGAP2O75044 1071 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 ASIC2Q16515 512 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 SFMBT2Q5VUG0 894 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 RASGRP2Q7LDG7 609 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 NBPF11Q86T75 865 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 TMEM60Q9H2L4 133 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 HAUS4Q9H6D7 363 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 ANKRD26Q9UPS8 1709 aa12.21□□□□□ -0.45
COL27A1-204ENST00000477421 TCRBV5S4A2TA0A5A2 114 aa12.21□□□□□ -0.46
COL27A1-204ENST00000477421 ATP2C1P98194 919 aaPredicted RBP12.21□□□□□ -0.46
COL27A1-204ENST00000477421 TTBK2Q6IQ55 1244 aa12.21□□□□□ -0.46
COL27A1-204ENST00000477421 SCLT1Q96NL6 688 aa12.21□□□□□ -0.46
COL27A1-204ENST00000477421 BPIFA3Q9BQP9 254 aa12.21□□□□□ -0.46
COL27A1-204ENST00000477421 NT5C3AQ9H0P0 336 aa12.21□□□□□ -0.46
COL27A1-204ENST00000477421 FAM217BQ9NTX9 383 aaPredicted RBP12.21□□□□□ -0.46
COL27A1-204ENST00000477421 USP17L10C9JJH3 530 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 CLIC2O15247 247 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 GAS7O60861 476 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 NDUFA10O95299 355 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 AKR1B1P15121 316 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 ARL6IP4Q66PJ3 421 aaKnown RBP12.2□□□□□ -0.46
COL27A1-204ENST00000477421 ADAT2Q7Z6V5 191 aaKnown RBP12.2□□□□□ -0.46
COL27A1-204ENST00000477421 RIOK1Q9BRS2 568 aaKnown RBP12.2□□□□□ -0.46
COL27A1-204ENST00000477421 ZCCHC17Q9NP64 241 aaKnown RBP12.2□□□□□ -0.46
COL27A1-204ENST00000477421 ARMCX3Q9UH62 379 aaPredicted RBP12.2□□□□□ -0.46
COL27A1-204ENST00000477421 TRPC5Q9UL62 973 aaPredicted RBP12.2□□□□□ -0.46
COL27A1-204ENST00000477421 FRMD4BQ9Y2L6 1034 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 TTC26A0AVF1 554 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 CCNE1P24864 410 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 PDE6BP35913 854 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 LLGL1Q15334 1064 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 RBM43Q6ZSC3 357 aaKnown RBP12.2□□□□□ -0.46
COL27A1-204ENST00000477421 SRGAP1Q7Z6B7 1085 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 DYDC1Q8WWB3 177 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 ATRIPQ8WXE1 791 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 VEGFAP15692 232 aaPredicted RBP12.2□□□□□ -0.46
COL27A1-204ENST00000477421 FXR1P51114 621 aaKnown RBP eCLIP12.2□□□□□ -0.46
COL27A1-204ENST00000477421 IFI16Q16666 785 aaKnown RBP12.2□□□□□ -0.46
COL27A1-204ENST00000477421 ASPRV1Q53RT3 343 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 FBXO33Q7Z6M2 555 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 SELENOOQ9BVL4 669 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 TDRD3Q9H7E2 651 aaKnown RBP12.2□□□□□ -0.46
COL27A1-204ENST00000477421 PDE11AQ9HCR9 933 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 ORC4O43929 436 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 HMGB2P26583 209 aaKnown RBP12.2□□□□□ -0.46
COL27A1-204ENST00000477421 CHP1Q99653 195 aa12.2□□□□□ -0.46
COL27A1-204ENST00000477421 XRCC5P13010 732 aaKnown RBP12.19□□□□□ -0.46
COL27A1-204ENST00000477421 ALAS1P13196 640 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 NR2F2P24468 414 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 EEF1GP26641 437 aaKnown RBP12.19□□□□□ -0.46
COL27A1-204ENST00000477421 HPDP32754 393 aaPredicted RBP12.19□□□□□ -0.46
COL27A1-204ENST00000477421 TRAF1Q13077 416 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 GPATCH4Q5T3I0 446 aaKnown RBP12.19□□□□□ -0.46
COL27A1-204ENST00000477421 PRR5LQ6MZQ0 368 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 VGLL2Q8N8G2 317 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 MAP3K14Q99558 947 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 BARHL2Q9NY43 387 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 SEPT2Q15019 361 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 LONRF2Q1L5Z9 754 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 CCDC25Q86WR0 208 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 DDX12PQ92771 950 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 DHTKD1Q96HY7 919 aaPredicted RBP12.19□□□□□ -0.46
COL27A1-204ENST00000477421 AMNQ9BXJ7 453 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 TSGA10Q9BZW7 698 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 ST7Q9NRC1 585 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 PHLPP2Q6ZVD8 1323 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 FER1L4A9Z1Z3 1794 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 COL5A2P05997 1499 aaPredicted RBP12.19□□□□□ -0.46
COL27A1-204ENST00000477421 ACTN4O43707 911 aaKnown RBP12.19□□□□□ -0.46
COL27A1-204ENST00000477421 GUCY2FP51841 1108 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 EHHADHQ08426 723 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 CFAP58Q5T655 872 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 MB21D1Q8N884 522 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 AK8Q96MA6 479 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms