RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 RTP1P59025 263 aa18.13■□□□□ 0.49
COMMD6-209ENST00000477377 GHRHRQ02643 423 aa18.13■□□□□ 0.49
COMMD6-209ENST00000477377 PWP2Q15269 919 aaKnown RBP18.13■□□□□ 0.49
COMMD6-209ENST00000477377 KCNA10Q16322 511 aa18.13■□□□□ 0.49
COMMD6-209ENST00000477377 EEPD1Q7L9B9 569 aa18.13■□□□□ 0.49
COMMD6-209ENST00000477377 SYTL5Q8TDW5 730 aaPredicted RBP18.13■□□□□ 0.49
COMMD6-209ENST00000477377 KCNB2Q92953 911 aa18.13■□□□□ 0.49
COMMD6-209ENST00000477377 LAMA3Q16787 3333 aa18.13■□□□□ 0.49
COMMD6-209ENST00000477377 A0A1W2PQ45 241 aaPredicted RBP18.12■□□□□ 0.49
COMMD6-209ENST00000477377 A0A1W2PQY0 241 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 ERICH2A1L162 156 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 ZBTB5O15062 677 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 MCM5P33992 734 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 FXR1P51114 621 aaKnown RBP eCLIP18.12■□□□□ 0.49
COMMD6-209ENST00000477377 ACLYP53396 1101 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 EXOSC10Q01780 885 aaKnown RBP18.12■□□□□ 0.49
COMMD6-209ENST00000477377 TNFAIP2Q03169 654 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 ADCK5Q3MIX3 580 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 TRIM60Q495X7 471 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 FBXO11Q86XK2 927 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 TAAR1Q96RJ0 339 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 PIGSQ96S52 555 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 MAP3K14Q99558 947 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 MYL10Q9BUA6 226 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 MAF1Q9H063 256 aa18.12■□□□□ 0.49
COMMD6-209ENST00000477377 ADD3Q9UEY8 706 aaKnown RBP18.12■□□□□ 0.49
COMMD6-209ENST00000477377 BAZ2BQ9UIF8 2168 aaKnown RBP18.11■□□□□ 0.49
COMMD6-209ENST00000477377 SZT2Q5T011 3432 aa18.11■□□□□ 0.49
COMMD6-209ENST00000477377 SLC34A2O95436 690 aa18.11■□□□□ 0.49
COMMD6-209ENST00000477377 BMP8BP34820 402 aa18.11■□□□□ 0.49
COMMD6-209ENST00000477377 LIFRP42702 1097 aa18.11■□□□□ 0.49
COMMD6-209ENST00000477377 MAGEA10P43363 369 aaPredicted RBP18.11■□□□□ 0.49
COMMD6-209ENST00000477377 SART3Q15020 963 aaKnown RBP18.11■□□□□ 0.49
COMMD6-209ENST00000477377 IQSEC1Q6DN90 963 aa18.11■□□□□ 0.49
COMMD6-209ENST00000477377 ZNF654Q8IZM8 581 aa18.11■□□□□ 0.49
COMMD6-209ENST00000477377 DNERQ8NFT8 737 aa18.11■□□□□ 0.49
COMMD6-209ENST00000477377 TMEM87BQ96K49 555 aa18.11■□□□□ 0.49
COMMD6-209ENST00000477377 AMNQ9BXJ7 453 aa18.11■□□□□ 0.49
COMMD6-209ENST00000477377 LRRC2Q9BYS8 371 aa18.11■□□□□ 0.49
COMMD6-209ENST00000477377 VTA1Q9NP79 307 aa18.11■□□□□ 0.49
COMMD6-209ENST00000477377 MOXD2PA6NHM9 499 aa18.1■□□□□ 0.49
COMMD6-209ENST00000477377 HSD17B4P51659 736 aa18.1■□□□□ 0.49
COMMD6-209ENST00000477377 CATIPQ7Z7H3 387 aa18.1■□□□□ 0.49
COMMD6-209ENST00000477377 MYH6P13533 1939 aa18.1■□□□□ 0.49
COMMD6-209ENST00000477377 DHX16O60231 1041 aaKnown RBP18.09■□□□□ 0.49
COMMD6-209ENST00000477377 DDAH1O94760 285 aa18.09■□□□□ 0.49
COMMD6-209ENST00000477377 ASGR1P07306 291 aa18.09■□□□□ 0.49
COMMD6-209ENST00000477377 C6orf222P0C671 652 aaPredicted RBP18.09■□□□□ 0.49
COMMD6-209ENST00000477377 BEX3Q00994 111 aa18.09■□□□□ 0.49
COMMD6-209ENST00000477377 SH3RF1Q7Z6J0 888 aa18.09■□□□□ 0.49
COMMD6-209ENST00000477377 NUP133Q8WUM0 1156 aa18.09■□□□□ 0.49
COMMD6-209ENST00000477377 ATP11BQ9Y2G3 1177 aa18.09■□□□□ 0.49
COMMD6-209ENST00000477377 MRPL11Q9Y3B7 192 aaKnown RBP18.09■□□□□ 0.49
COMMD6-209ENST00000477377 Q9Y3F1 56 aa18.09■□□□□ 0.49
COMMD6-209ENST00000477377 TRIOBPQ9H2D6 2365 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 TRIM43BA6NCK2 446 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 DYNC1LI2O43237 492 aaPredicted RBP18.08■□□□□ 0.48
COMMD6-209ENST00000477377 CDK7P50613 346 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 TLE2Q04725 743 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 DUSP28Q4G0W2 176 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 GNASQ5JWF2 1037 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 CASC1Q6TDU7 716 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 TLK2Q86UE8 772 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 SGMS1Q86VZ5 419 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 MCF2L2Q86YR7 1114 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 TMTC2Q8N394 836 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 SRBD1Q8N5C6 995 aaKnown RBP18.08■□□□□ 0.48
COMMD6-209ENST00000477377 TRIM43Q96BQ3 446 aaPredicted RBP18.08■□□□□ 0.48
COMMD6-209ENST00000477377 NEK1Q96PY6 1258 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 PDLIM7Q9NR12 457 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 PPP4R2Q9NY27 417 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 PCDHA1Q9Y5I3 950 aa18.08■□□□□ 0.48
COMMD6-209ENST00000477377 PNMA6FA0A0J9YX94 578 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 ARIH2O95376 493 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 PLEKHA8P1O95397 391 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 NEFLP07196 543 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 RXRAP19793 462 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 ITGB8P26012 769 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 SMARCA1P28370 1054 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 HSPA4P34932 840 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 ERICH6BQ5W0A0 696 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 ANKRD33Q7Z3H0 272 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 HOMER1Q86YM7 354 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 TCEANC2Q96MN5 208 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 SPZ1Q9BXG8 430 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 WDR11Q9BZH6 1224 aa18.07■□□□□ 0.48
COMMD6-209ENST00000477377 GRIN2DO15399 1336 aa18.06■□□□□ 0.48
COMMD6-209ENST00000477377 ELP1O95163 1332 aa18.06■□□□□ 0.48
COMMD6-209ENST00000477377 MDM2Q00987 491 aaPredicted RBP18.06■□□□□ 0.48
COMMD6-209ENST00000477377 RNF20Q5VTR2 975 aa18.06■□□□□ 0.48
COMMD6-209ENST00000477377 CCDC62Q6P9F0 684 aa18.06■□□□□ 0.48
COMMD6-209ENST00000477377 DHX32Q7L7V1 743 aaKnown RBP18.06■□□□□ 0.48
COMMD6-209ENST00000477377 RAB11FIP4Q86YS3 637 aa18.06■□□□□ 0.48
COMMD6-209ENST00000477377 CMTR1Q8N1G2 835 aaKnown RBP18.06■□□□□ 0.48
COMMD6-209ENST00000477377 PCSK9Q8NBP7 692 aaKnown RBP18.06■□□□□ 0.48
COMMD6-209ENST00000477377 COPS5Q92905 334 aa18.06■□□□□ 0.48
COMMD6-209ENST00000477377 STARD7Q9NQZ5 370 aa18.06■□□□□ 0.48
COMMD6-209ENST00000477377 BRPF3Q9ULD4 1205 aa18.06■□□□□ 0.48
COMMD6-209ENST00000477377 LTBP2Q14767 1821 aa18.06■□□□□ 0.48
COMMD6-209ENST00000477377 A0A1W2PPC1 479 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms