RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 RELL1Q8IUW5 271 aa5.13□□□□□ -1.59
XRN1-211ENST00000477237 TXNDC5Q8NBS9 432 aaKnown RBP5.13□□□□□ -1.59
XRN1-211ENST00000477237 DNERQ8NFT8 737 aa5.13□□□□□ -1.59
XRN1-211ENST00000477237 C11orf84Q9BUA3 381 aaPredicted RBP5.13□□□□□ -1.59
XRN1-211ENST00000477237 RSRP1Q9BUV0 290 aa5.13□□□□□ -1.59
XRN1-211ENST00000477237 MINDY4BA8MYZ0 360 aa5.12□□□□□ -1.59
XRN1-211ENST00000477237 B4GALT3O60512 393 aa5.12□□□□□ -1.59
XRN1-211ENST00000477237 CYP2C8P10632 490 aa5.12□□□□□ -1.59
XRN1-211ENST00000477237 L1CAMP32004 1257 aa5.12□□□□□ -1.59
XRN1-211ENST00000477237 TGFB2P61812 414 aa5.12□□□□□ -1.59
XRN1-211ENST00000477237 TRIM26Q12899 539 aaPredicted RBP5.12□□□□□ -1.59
XRN1-211ENST00000477237 FHL2Q14192 279 aa5.12□□□□□ -1.59
XRN1-211ENST00000477237 SMN1Q16637 294 aaKnown RBP5.12□□□□□ -1.59
XRN1-211ENST00000477237 SPDYAQ5MJ70 313 aa5.12□□□□□ -1.59
XRN1-211ENST00000477237 PTCHD1Q96NR3 888 aa5.12□□□□□ -1.59
XRN1-211ENST00000477237 PDE4CQ08493 712 aa5.11□□□□□ -1.59
XRN1-211ENST00000477237 SLC9A5Q14940 896 aa5.11□□□□□ -1.59
XRN1-211ENST00000477237 CWF19L2Q2TBE0 894 aaKnown RBP5.11□□□□□ -1.59
XRN1-211ENST00000477237 C14orf37Q86TY3 774 aa5.11□□□□□ -1.59
XRN1-211ENST00000477237 C7orf61Q8IZ16 206 aa5.11□□□□□ -1.59
XRN1-211ENST00000477237 PEX11GQ96HA9 241 aa5.11□□□□□ -1.59
XRN1-211ENST00000477237 WWC2-AS2Q96NR7 200 aa5.11□□□□□ -1.59
XRN1-211ENST00000477237 FCRL3Q96P31 734 aaPredicted RBP5.11□□□□□ -1.59
XRN1-211ENST00000477237 DEF6Q9H4E7 631 aa5.11□□□□□ -1.59
XRN1-211ENST00000477237 NPEPPSL1A6NEC2 478 aa5.1□□□□□ -1.59
XRN1-211ENST00000477237 TBC1D8O95759 1140 aa5.1□□□□□ -1.59
XRN1-211ENST00000477237 NME1P15531 152 aaKnown RBP5.1□□□□□ -1.59
XRN1-211ENST00000477237 LRRC3Q9BY71 257 aa5.1□□□□□ -1.59
XRN1-211ENST00000477237 EHMT1Q9H9B1 1298 aa5.1□□□□□ -1.59
XRN1-211ENST00000477237 C9IYK1 514 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 DDX3XO00571 662 aaKnown RBP eCLIP5.09□□□□□ -1.59
XRN1-211ENST00000477237 PPP1R11O60927 126 aaPredicted RBP5.09□□□□□ -1.59
XRN1-211ENST00000477237 IFNGR1P15260 489 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 HNRNPA0Q13151 305 aaKnown RBP5.09□□□□□ -1.59
XRN1-211ENST00000477237 SURF1Q15526 300 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 PRR31Q5SQ13 230 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 FBXL19Q6PCT2 694 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 STK32CQ86UX6 486 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 CABP7Q86V35 215 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 CIR1Q86X95 450 aaPredicted RBP5.09□□□□□ -1.59
XRN1-211ENST00000477237 KYQ8NBH2 561 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 NETO2Q8NC67 525 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 IGDCC4Q8TDY8 1250 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 LCORQ96JN0 433 aaPredicted RBP5.09□□□□□ -1.59
XRN1-211ENST00000477237 ZNF341Q9BYN7 854 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 PARP2Q9UGN5 583 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 NUDT5Q9UKK9 219 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 RWDD3Q9Y3V2 267 aa5.09□□□□□ -1.59
XRN1-211ENST00000477237 NPIPB8E9PQR5 432 aa5.08□□□□□ -1.6
XRN1-211ENST00000477237 TNFRSF10CO14798 259 aa5.08□□□□□ -1.6
XRN1-211ENST00000477237 ZBTB7AO95365 584 aa5.08□□□□□ -1.6
XRN1-211ENST00000477237 NOP2P46087 812 aaKnown RBP5.08□□□□□ -1.6
XRN1-211ENST00000477237 SELENOPP49908 381 aa5.08□□□□□ -1.6
XRN1-211ENST00000477237 INHBEP58166 350 aa5.08□□□□□ -1.6
XRN1-211ENST00000477237 ZNF445P59923 1031 aa5.08□□□□□ -1.6
XRN1-211ENST00000477237 DAB2P98082 770 aa5.08□□□□□ -1.6
XRN1-211ENST00000477237 LZTR1Q8N653 840 aa5.08□□□□□ -1.6
XRN1-211ENST00000477237 BRF1Q92994 677 aa5.08□□□□□ -1.6
XRN1-211ENST00000477237 CHFRQ96EP1 664 aa5.08□□□□□ -1.6
XRN1-211ENST00000477237 SLC9A7Q96T83 725 aa5.08□□□□□ -1.6
XRN1-211ENST00000477237 ROBO2Q9HCK4 1378 aa5.07□□□□□ -1.6
XRN1-211ENST00000477237 MUSKO15146 869 aa5.07□□□□□ -1.6
XRN1-211ENST00000477237 BRD1O95696 1058 aa5.07□□□□□ -1.6
XRN1-211ENST00000477237 CRKP46108 304 aa5.07□□□□□ -1.6
XRN1-211ENST00000477237 CLCQ05315 142 aa5.07□□□□□ -1.6
XRN1-211ENST00000477237 PSMD2Q13200 908 aa5.07□□□□□ -1.6
XRN1-211ENST00000477237 PWP1Q13610 501 aa5.07□□□□□ -1.6
XRN1-211ENST00000477237 CCDC144CPQ8IYA2 1237 aa5.07□□□□□ -1.6
XRN1-211ENST00000477237 FAM26EQ8N5C1 309 aa5.07□□□□□ -1.6
XRN1-211ENST00000477237 SUCOQ9UBS9 1254 aaKnown RBP5.07□□□□□ -1.6
XRN1-211ENST00000477237 SIT1Q9Y3P8 196 aa5.07□□□□□ -1.6
XRN1-211ENST00000477237 TNFRSF18Q9Y5U5 241 aa5.07□□□□□ -1.6
XRN1-211ENST00000477237 PATE3B3GLJ2 98 aa5.06□□□□□ -1.6
XRN1-211ENST00000477237 IGFL4Q6B9Z1 124 aa5.06□□□□□ -1.6
XRN1-211ENST00000477237 PLEKHH3Q7Z736 793 aa5.06□□□□□ -1.6
XRN1-211ENST00000477237 TTLL6Q8N841 843 aa5.06□□□□□ -1.6
XRN1-211ENST00000477237 RGS22Q8NE09 1264 aa5.06□□□□□ -1.6
XRN1-211ENST00000477237 PTPN18Q99952 460 aa5.06□□□□□ -1.6
XRN1-211ENST00000477237 MTA3Q9BTC8 594 aa5.06□□□□□ -1.6
XRN1-211ENST00000477237 KCNQ5Q9NR82 932 aa5.06□□□□□ -1.6
XRN1-211ENST00000477237 TCAF1Q9Y4C2 921 aa5.06□□□□□ -1.6
XRN1-211ENST00000477237 TESMINQ9Y4I5 508 aa5.06□□□□□ -1.6
XRN1-211ENST00000477237 FAM86C2PA6NEL3 165 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 C9orf118A6NHY6 69 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 GREM1O60565 184 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 CD3EP07766 207 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 ITGA1P56199 1179 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 NOL9Q5SY16 702 aaKnown RBP5.05□□□□□ -1.6
XRN1-211ENST00000477237 TDRD10Q5VZ19 366 aaKnown RBP5.05□□□□□ -1.6
XRN1-211ENST00000477237 DCAF15Q66K64 600 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 WWC2Q6AWC2 1192 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 GK5Q6ZS86 529 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 FIBCD1Q8N539 461 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 MBD6Q96DN6 1003 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 FAM161BQ96MY7 647 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 PCDH18Q9HCL0 1135 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 GP6Q9HCN6 339 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 KBTBD4Q9NVX7 518 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 PCSK5Q92824 1860 aa5.05□□□□□ -1.6
XRN1-211ENST00000477237 WDR33Q9C0J8 1336 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms