RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 CCDC84Q86UT8 332 aaPredicted RBP6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 LRRTM3Q86VH5 581 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 IFNL2Q8IZJ0 200 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 RUFY1Q96T51 708 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 TRIM8Q9BZR9 551 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 B3GNT4Q9C0J1 378 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 CSRNP2Q9H175 543 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 MRPL46Q9H2W6 279 aaKnown RBP6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 RGL1Q9NZL6 768 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 CTNNA3Q9UI47 895 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 CCPG1Q9ULG6 757 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 EDARQ9UNE0 448 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 GNAT3A8MTJ3 354 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 EIF3CLB5ME19 914 aaKnown RBP6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 LDHBP07195 334 aaKnown RBP6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 FUT4P22083 530 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 ALAS2P22557 587 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 C21orf58P58505 322 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 EXOSC10Q01780 885 aaKnown RBP6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 PFKPQ01813 784 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 FAPQ12884 760 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 TNIP1Q15025 636 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 TKFCQ3LXA3 575 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 PLEKHG4Q58EX7 1191 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 TRIM68Q6AZZ1 485 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 THOC7Q6I9Y2 204 aaKnown RBP6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 MICALCLQ6ZW33 695 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 PPP1R9BQ96SB3 815 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 TBCBQ99426 244 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 EIF3CQ99613 913 aaKnown RBP6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 ALG13Q9NP73 1137 aaKnown RBP6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 CFDP1Q9UEE9 299 aaPredicted RBP6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 TTLL3Q9Y4R7 772 aa6.66□□□□□ -1.34
SPTLC3-205ENST00000476791 TEX28O15482 410 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 ACSL4O60488 711 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 CES1P23141 567 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 HAAOP46952 286 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 SMCPP49901 116 aaPredicted RBP6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 PDE6CP51160 858 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 LIMK1P53667 647 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 NNTQ13423 1086 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 SMC1AQ14683 1233 aaKnown RBP6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 TMEM259Q4ZIN3 620 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 RAB11FIP4Q86YS3 637 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 PPM1NQ8N819 430 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 MIPOL1Q8TD10 442 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 COG8Q96MW5 612 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 FERD3LQ96RJ6 166 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 UTP14AQ9BVJ6 771 aaKnown RBP6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 OSBPL3Q9H4L5 887 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 CCSER2Q9H7U1 834 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 PNMA8BQ9ULN7 279 aaPredicted RBP6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 CARD8Q9Y2G2 431 aa6.65□□□□□ -1.34
SPTLC3-205ENST00000476791 LAMC3Q9Y6N6 1575 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 NDUFAB1O14561 156 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 KRT13P13646 458 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 CAP2P40123 477 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 SLC12A2P55011 1212 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 TUBA1BP68363 451 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 MOGSQ13724 837 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 SEMA3AQ14563 771 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 SYCP1Q15431 976 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 CAVIN4Q5BKX8 364 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 TUBA1AQ71U36 451 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 EEPD1Q7L9B9 569 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 CTCFLQ8NI51 663 aaPredicted RBP6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 FATE1Q969F0 183 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 CFAP36Q96G28 342 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 NAF1Q96HR8 494 aaKnown RBP6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 GMCL1Q96IK5 515 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 NAP1L3Q99457 506 aaPredicted RBP6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 CLSTN2Q9H4D0 955 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 KCNQ5Q9NR82 932 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 HOMER3Q9NSC5 361 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 CCDC39Q9UFE4 941 aa6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 HOOK1Q9UJC3 728 aaKnown RBP6.65□□□□□ -1.35
SPTLC3-205ENST00000476791 CEP104O60308 925 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 NEMFO60524 1076 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 DNAJB1P25685 340 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 ANXA13P27216 316 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 ATP5DP30049 168 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 KRT20P35900 424 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 TMF1P82094 1093 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 AKAP17AQ02040 695 aaKnown RBP6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 NEK5Q6P3R8 708 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 ARHGAP22Q7Z5H3 698 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 SYTL1Q8IYJ3 562 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 CCDC116Q8IYX3 515 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 SPATA5Q8NB90 893 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 PPP1R14CQ8TAE6 165 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 EXOC6Q8TAG9 804 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 TCF12Q99081 682 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 FOXP3Q9BZS1 431 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 BLOC1S4Q9NUP1 217 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 TACC3Q9Y6A5 838 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 TRAV6A0A075B6T7 132 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 H0YC42 278 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 GUCA1CO95843 209 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms