RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 FAM160B2Q86V87 743 aa14.21□□□□□ -0.13
HDAC6-219ENST00000476625 GMCL1Q96IK5 515 aa14.21□□□□□ -0.13
HDAC6-219ENST00000476625 NAPBQ9H115 298 aa14.21□□□□□ -0.13
HDAC6-219ENST00000476625 RCAN3Q9UKA8 241 aa14.21□□□□□ -0.13
HDAC6-219ENST00000476625 SLC4A7Q9Y6M7 1214 aa14.21□□□□□ -0.13
HDAC6-219ENST00000476625 SCN10AQ9Y5Y9 1956 aa14.21□□□□□ -0.13
HDAC6-219ENST00000476625 TNKSO95271 1327 aa14.2□□□□□ -0.14
HDAC6-219ENST00000476625 XIRP2A4UGR9 3374 aa14.2□□□□□ -0.14
HDAC6-219ENST00000476625 BMP1P13497 986 aa14.2□□□□□ -0.14
HDAC6-219ENST00000476625 ATP2A2P16615 1042 aaKnown RBP14.2□□□□□ -0.14
HDAC6-219ENST00000476625 GNAT2P19087 354 aa14.2□□□□□ -0.14
HDAC6-219ENST00000476625 ALDH5A1P51649 535 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-219ENST00000476625 CHMP4BP1P59074 171 aa14.2□□□□□ -0.14
HDAC6-219ENST00000476625 PDE4BQ07343 736 aa14.2□□□□□ -0.14
HDAC6-219ENST00000476625 SKIV2LQ15477 1246 aaKnown RBP14.2□□□□□ -0.14
HDAC6-219ENST00000476625 ZMYM1Q5SVZ6 1142 aa14.2□□□□□ -0.14
HDAC6-219ENST00000476625 RCSD1Q6JBY9 416 aa14.2□□□□□ -0.14
HDAC6-219ENST00000476625 CHURC1Q8WUH1 139 aa14.2□□□□□ -0.14
HDAC6-219ENST00000476625 FSD1Q9BTV5 496 aa14.2□□□□□ -0.14
HDAC6-219ENST00000476625 GPCPD1Q9NPB8 672 aa14.2□□□□□ -0.14
HDAC6-219ENST00000476625 TSPY2A6NKD2 308 aa14.19□□□□□ -0.14
HDAC6-219ENST00000476625 ZFYP08048 801 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-219ENST00000476625 PURAQ00577 322 aaKnown RBP14.19□□□□□ -0.14
HDAC6-219ENST00000476625 TCTN1Q2MV58 587 aa14.19□□□□□ -0.14
HDAC6-219ENST00000476625 FAM47CQ5HY64 1035 aa14.19□□□□□ -0.14
HDAC6-219ENST00000476625 IQSEC1Q6DN90 963 aa14.19□□□□□ -0.14
HDAC6-219ENST00000476625 OR6J1Q8NGC5 347 aa14.19□□□□□ -0.14
HDAC6-219ENST00000476625 KHSRPQ92945 711 aaKnown RBP eCLIP14.19□□□□□ -0.14
HDAC6-219ENST00000476625 DCTPP1Q9H773 170 aa14.19□□□□□ -0.14
HDAC6-219ENST00000476625 PCDHA11Q9Y5I1 949 aa14.19□□□□□ -0.14
HDAC6-219ENST00000476625 MTCH2Q9Y6C9 303 aa14.19□□□□□ -0.14
HDAC6-219ENST00000476625 TTC28Q96AY4 2481 aa14.19□□□□□ -0.14
HDAC6-219ENST00000476625 PTPDC1A2A3K4 754 aa14.18□□□□□ -0.14
HDAC6-219ENST00000476625 RANBP6O60518 1105 aaKnown RBP14.18□□□□□ -0.14
HDAC6-219ENST00000476625 CABYRO75952 493 aa14.18□□□□□ -0.14
HDAC6-219ENST00000476625 CALML3P27482 149 aa14.18□□□□□ -0.14
HDAC6-219ENST00000476625 NBPF20Q3BBV1 942 aa14.18□□□□□ -0.14
HDAC6-219ENST00000476625 TKFCQ3LXA3 575 aa14.18□□□□□ -0.14
HDAC6-219ENST00000476625 MORC4Q8TE76 937 aa14.18□□□□□ -0.14
HDAC6-219ENST00000476625 WDR11Q9BZH6 1224 aa14.18□□□□□ -0.14
HDAC6-219ENST00000476625 MTIF3Q9H2K0 278 aaKnown RBP14.18□□□□□ -0.14
HDAC6-219ENST00000476625 RANBP17Q9H2T7 1088 aaKnown RBP14.18□□□□□ -0.14
HDAC6-219ENST00000476625 CPVLQ9H3G5 476 aa14.18□□□□□ -0.14
HDAC6-219ENST00000476625 VTA1Q9NP79 307 aa14.18□□□□□ -0.14
HDAC6-219ENST00000476625 SYNPO2Q9UMS6 1093 aa14.18□□□□□ -0.14
HDAC6-219ENST00000476625 KIAA1217Q5T5P2 1943 aa14.17□□□□□ -0.14
HDAC6-219ENST00000476625 LCHNA4D1U4 455 aa14.17□□□□□ -0.14
HDAC6-219ENST00000476625 ARIH2O95376 493 aa14.17□□□□□ -0.14
HDAC6-219ENST00000476625 ICAM1P05362 532 aa14.17□□□□□ -0.14
HDAC6-219ENST00000476625 DUSP28Q4G0W2 176 aa14.17□□□□□ -0.14
HDAC6-219ENST00000476625 RRP12Q5JTH9 1297 aaKnown RBP14.17□□□□□ -0.14
HDAC6-219ENST00000476625 IL27Q8NEV9 243 aa14.17□□□□□ -0.14
HDAC6-219ENST00000476625 CLEC4DQ8WXI8 215 aa14.17□□□□□ -0.14
HDAC6-219ENST00000476625 ARNTL2Q8WYA1 636 aa14.17□□□□□ -0.14
HDAC6-219ENST00000476625 GPATCH3Q96I76 525 aa14.17□□□□□ -0.14
HDAC6-219ENST00000476625 NACAP1Q9BZK3 213 aa14.17□□□□□ -0.14
HDAC6-219ENST00000476625 EPHX3Q9H6B9 360 aa14.17□□□□□ -0.14
HDAC6-219ENST00000476625 ZNF287Q9HBT7 754 aa14.17□□□□□ -0.14
HDAC6-219ENST00000476625 PCDHB15Q9Y5E8 787 aa14.17□□□□□ -0.14
HDAC6-219ENST00000476625 PRRC2BQ5JSZ5 2229 aaKnown RBP14.17□□□□□ -0.14
HDAC6-219ENST00000476625 MYH6P13533 1939 aa14.16□□□□□ -0.14
HDAC6-219ENST00000476625 ZEB2O60315 1214 aa14.16□□□□□ -0.14
HDAC6-219ENST00000476625 FDX1P10109 184 aa14.16□□□□□ -0.14
HDAC6-219ENST00000476625 TAP1Q03518 808 aa14.16□□□□□ -0.14
HDAC6-219ENST00000476625 SYDE2Q5VT97 1194 aa14.16□□□□□ -0.14
HDAC6-219ENST00000476625 TMEM47Q9BQJ4 181 aa14.16□□□□□ -0.14
HDAC6-219ENST00000476625 Q9Y3F1 56 aa14.16□□□□□ -0.14
HDAC6-219ENST00000476625 SIP14410 1827 aa14.15□□□□□ -0.14
HDAC6-219ENST00000476625 MYH7BA7E2Y1 1941 aa14.15□□□□□ -0.14
HDAC6-219ENST00000476625 PLA2G6O60733 806 aa14.15□□□□□ -0.14
HDAC6-219ENST00000476625 SLC3A2P08195 630 aaKnown RBP14.15□□□□□ -0.14
HDAC6-219ENST00000476625 IQCF3P0C7M6 154 aa14.15□□□□□ -0.14
HDAC6-219ENST00000476625 HAND2P61296 217 aa14.15□□□□□ -0.14
HDAC6-219ENST00000476625 GPNMBQ14956 572 aa14.15□□□□□ -0.14
HDAC6-219ENST00000476625 TMEM67Q5HYA8 995 aa14.15□□□□□ -0.14
HDAC6-219ENST00000476625 DIEXFQ68CQ4 756 aaKnown RBP14.15□□□□□ -0.14
HDAC6-219ENST00000476625 RPUSD2Q8IZ73 545 aaKnown RBP14.15□□□□□ -0.14
HDAC6-219ENST00000476625 TBC1D5Q92609 795 aa14.15□□□□□ -0.14
HDAC6-219ENST00000476625 CTAGE1Q96RT6 745 aa14.15□□□□□ -0.14
HDAC6-219ENST00000476625 MTG1Q9BT17 334 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-219ENST00000476625 TOMM22Q9NS69 142 aa14.15□□□□□ -0.14
HDAC6-219ENST00000476625 LAMA4Q16363 1823 aa14.15□□□□□ -0.14
HDAC6-219ENST00000476625 SALL3Q9BXA9 1300 aa14.15□□□□□ -0.15
HDAC6-219ENST00000476625 ATG2AQ2TAZ0 1938 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 RBM47A0AV96 593 aaKnown RBP14.14□□□□□ -0.15
HDAC6-219ENST00000476625 FAM86C2PA6NEL3 165 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 LPXNO60711 386 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 GOLGA8HP0CJ92 632 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 PLA2G5P39877 138 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 NOVP48745 357 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 DEFB103AP81534 67 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 GRB10Q13322 594 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 GDPD5Q8WTR4 605 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 DCAF4Q8WV16 495 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 FAM227BQ96M60 508 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 FTOQ9C0B1 505 aaKnown RBP eCLIP14.14□□□□□ -0.15
HDAC6-219ENST00000476625 POLR3EQ9NVU0 708 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 TRANK1O15050 2925 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 TTC41PQ6P2S7 1318 aa14.14□□□□□ -0.15
HDAC6-219ENST00000476625 A0A0D9SFI3 127 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms