RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SASH3O75995 380 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 PRCPP42785 496 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 COPB1P53618 953 aaKnown RBP5.55□□□□□ -1.52
CCDC39-204ENST00000476379 DGKZQ13574 1117 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 SMAD1Q15797 465 aaKnown RBP5.55□□□□□ -1.52
CCDC39-204ENST00000476379 HERC4Q5GLZ8 1057 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-204ENST00000476379 DYDC1Q8WWB3 177 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 PNKPQ96T60 521 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 SYT17Q9BSW7 474 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 AP1M1Q9BXS5 423 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 LCMT1Q9UIC8 334 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 EPN1Q9Y6I3 576 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-204ENST00000476379 A0A087X0B3 334 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 GOLGA6CA6NDK9 693 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 NDUFAB1O14561 156 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 KRT86O43790 486 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 PEX10O60683 326 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 ATP1A1P05023 1023 aaKnown RBP5.55□□□□□ -1.52
CCDC39-204ENST00000476379 GOLGA6DP0CG33 693 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 NEFHP12036 1026 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 SLCO1A2P46721 670 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 POLR2FP61218 127 aaKnown RBP5.55□□□□□ -1.52
CCDC39-204ENST00000476379 NFRKBQ6P4R8 1299 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 CNGA4Q8IV77 575 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 MLKLQ8NB16 471 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 IFIH1Q9BYX4 1025 aaKnown RBP5.55□□□□□ -1.52
CCDC39-204ENST00000476379 GOLGA6AQ9NYA3 693 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 MYO6Q9UM54 1294 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 CTDP1Q9Y5B0 961 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-204ENST00000476379 ZNF804BA4D1E1 1349 aa5.55□□□□□ -1.52
CCDC39-204ENST00000476379 DOT1LQ8TEK3 1739 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 TTC26A0AVF1 554 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 KLRF2D3W0D1 207 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 RPN1P04843 607 aaKnown RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 SLFN14P0C7P3 912 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 BMP6P22004 513 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 KIF5BP33176 963 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 MAGEA1P43355 309 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 IFNAR2P48551 515 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 GTF2A1P52655 376 aaPredicted RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 CC2D1AQ6P1N0 951 aaPredicted RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 HDXQ7Z353 690 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 CABP7Q86V35 215 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 CPXCR1Q8N123 301 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 PIGSQ96S52 555 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 RASSF4Q9H2L5 321 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 GGA1Q9UJY5 639 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 EYSQ5T1H1 3165 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 PLSCR1O15162 318 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 RNF40O75150 1001 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 LRRN2O75325 713 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 PARP1P09874 1014 aaKnown RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 COPB2P35606 906 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 PLA2G4AP47712 749 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 SETQ01105 290 aaPredicted RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 GUCY2DQ02846 1103 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 PDCLQ13371 301 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 TMEM132AQ24JP5 1023 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 SLC27A3Q5K4L6 730 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 FAM182AQ5T1J6 154 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 MOB2Q70IA6 237 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 BCAS4Q8TDM0 211 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 ANKRD7Q92527 254 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 TACO1Q9BSH4 297 aaKnown RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 TDRD3Q9H7E2 651 aaKnown RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 TTF2Q9UNY4 1162 aaKnown RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 SAR1BQ9Y6B6 198 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 NPHP3-ACAD11A0A0J9YXS1 232 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 GSTTP1A0A1W2PQM5 241 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 ZSCAN5CA6NGD5 496 aaPredicted RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 H3BQF6 201 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 ADAMTS3O15072 1205 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 SRGNP10124 158 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 YBX3P16989 372 aaKnown RBP eCLIP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 PLCG1P19174 1290 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 CYLC1P35663 651 aaPredicted RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 TOB1P50616 345 aaPredicted RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 PLCD1P51178 756 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 GNGT1P63211 74 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 PABPC4Q13310 644 aaKnown RBP eCLIP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 TTLL12Q14166 644 aaPredicted RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 WDR78Q5VTH9 848 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 C8orf74Q6P047 294 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 SYCP3Q8IZU3 236 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 TTLL6Q8N841 843 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 CEP112Q8N8E3 955 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 TC2NQ8N9U0 490 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 CNOT6LQ96LI5 555 aaKnown RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 TUBGCP2Q9BSJ2 902 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 GOLGA6L7A0A1B0GV03 622 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 GOLGA6BA6NDN3 693 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 GDF11O95390 407 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 SCG2P13521 617 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 HOXA13P31271 388 aaPredicted RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 RDXP35241 583 aaKnown RBP5.54□□□□□ -1.52
CCDC39-204ENST00000476379 MECOMQ03112 1051 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 CASP8Q14790 479 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 NCAPHQ15003 741 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 CYP26C1Q6V0L0 522 aa5.54□□□□□ -1.52
CCDC39-204ENST00000476379 TXLNBQ8N3L3 684 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms