RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 PRPF3O43395 683 aaKnown RBP16.63■□□□□ 0.25
CCNL1-217ENST00000476367 SLC30A10Q6XR72 485 aa16.63■□□□□ 0.25
CCNL1-217ENST00000476367 ARMC5Q96C12 935 aa16.63■□□□□ 0.25
CCNL1-217ENST00000476367 MAML3Q96JK9 1138 aa16.63■□□□□ 0.25
CCNL1-217ENST00000476367 ZNF333Q96JL9 665 aa16.63■□□□□ 0.25
CCNL1-217ENST00000476367 RNF26Q9BY78 433 aaPredicted RBP16.63■□□□□ 0.25
CCNL1-217ENST00000476367 PCDHA1Q9Y5I3 950 aa16.63■□□□□ 0.25
CCNL1-217ENST00000476367 DNAJC25-GNG10A0A024R161 153 aa16.62■□□□□ 0.25
CCNL1-217ENST00000476367 POTEB2H3BUK9 544 aa16.62■□□□□ 0.25
CCNL1-217ENST00000476367 K7ELQ4 463 aaPredicted RBP16.62■□□□□ 0.25
CCNL1-217ENST00000476367 CNTN2Q02246 1040 aa16.62■□□□□ 0.25
CCNL1-217ENST00000476367 ZNF792Q3KQV3 632 aa16.62■□□□□ 0.25
CCNL1-217ENST00000476367 SLC26A6Q9BXS9 759 aa16.62■□□□□ 0.25
CCNL1-217ENST00000476367 CYP39A1Q9NYL5 469 aa16.62■□□□□ 0.25
CCNL1-217ENST00000476367 MRPL11Q9Y3B7 192 aaKnown RBP16.62■□□□□ 0.25
CCNL1-217ENST00000476367 LRRC37A2A6NM11 1700 aa16.62■□□□□ 0.25
CCNL1-217ENST00000476367 CCDC85CA6NKD9 419 aa16.61■□□□□ 0.25
CCNL1-217ENST00000476367 CALML3P27482 149 aa16.61■□□□□ 0.25
CCNL1-217ENST00000476367 CYP2C19P33261 490 aa16.61■□□□□ 0.25
CCNL1-217ENST00000476367 UBXN2AP68543 259 aa16.61■□□□□ 0.25
CCNL1-217ENST00000476367 BAATQ14032 418 aaPredicted RBP16.61■□□□□ 0.25
CCNL1-217ENST00000476367 MTFR1Q15390 333 aa16.61■□□□□ 0.25
CCNL1-217ENST00000476367 PFKFB3Q16875 520 aaPredicted RBP16.61■□□□□ 0.25
CCNL1-217ENST00000476367 WWC2Q6AWC2 1192 aa16.61■□□□□ 0.25
CCNL1-217ENST00000476367 RNF207Q6ZRF8 634 aa16.61■□□□□ 0.25
CCNL1-217ENST00000476367 TRMT44Q8IYL2 757 aaKnown RBP16.61■□□□□ 0.25
CCNL1-217ENST00000476367 GPKOWQ92917 476 aaPredicted RBP eCLIP16.61■□□□□ 0.258e-7■■□□□ 12.6
CCNL1-217ENST00000476367 PURBQ96QR8 312 aaKnown RBP16.61■□□□□ 0.25
CCNL1-217ENST00000476367 GJB4Q9NTQ9 266 aa16.61■□□□□ 0.25
CCNL1-217ENST00000476367 FRMPD3Q5JV73 1810 aa16.6■□□□□ 0.25
CCNL1-217ENST00000476367 PRKAR2AP13861 404 aaKnown RBP16.6■□□□□ 0.25
CCNL1-217ENST00000476367 RPS6P62753 249 aaKnown RBP16.6■□□□□ 0.25
CCNL1-217ENST00000476367 MFSD14CQ5VZR4 134 aa16.6■□□□□ 0.25
CCNL1-217ENST00000476367 HEATR3Q7Z4Q2 680 aa16.6■□□□□ 0.25
CCNL1-217ENST00000476367 TBC1D5Q92609 795 aa16.6■□□□□ 0.25
CCNL1-217ENST00000476367 KIAA0100Q14667 2235 aaKnown RBP16.6■□□□□ 0.25
CCNL1-217ENST00000476367 STK36Q9NRP7 1315 aa16.6■□□□□ 0.25
CCNL1-217ENST00000476367 STXBP3O00186 592 aa16.59■□□□□ 0.25
CCNL1-217ENST00000476367 CPLX1O14810 134 aa16.59■□□□□ 0.25
CCNL1-217ENST00000476367 CFBP00751 764 aa16.59■□□□□ 0.25
CCNL1-217ENST00000476367 TRAF1Q13077 416 aa16.59■□□□□ 0.25
CCNL1-217ENST00000476367 NPY5RQ15761 445 aa16.59■□□□□ 0.25
CCNL1-217ENST00000476367 OLFML2BQ68BL8 750 aa16.59■□□□□ 0.25
CCNL1-217ENST00000476367 FAM133AQ8N9E0 248 aa16.59■□□□□ 0.25
CCNL1-217ENST00000476367 FGD4Q96M96 766 aa16.59■□□□□ 0.25
CCNL1-217ENST00000476367 LLPHQ9BRT6 129 aaKnown RBP16.59■□□□□ 0.25
CCNL1-217ENST00000476367 SCG2P13521 617 aa16.59■□□□□ 0.25
CCNL1-217ENST00000476367 CACNB2Q08289 660 aaPredicted RBP16.59■□□□□ 0.25
CCNL1-217ENST00000476367 UNC93B1Q9H1C4 597 aa16.59■□□□□ 0.25
CCNL1-217ENST00000476367 BARHL2Q9NY43 387 aa16.59■□□□□ 0.25
CCNL1-217ENST00000476367 DIS3Q9Y2L1 958 aaKnown RBP16.59■□□□□ 0.25
CCNL1-217ENST00000476367 DDX49Q9Y6V7 483 aaKnown RBP16.59■□□□□ 0.25
CCNL1-217ENST00000476367 ASTN1O14525 1302 aa16.58■□□□□ 0.24
CCNL1-217ENST00000476367 SOWAHBA6NEL2 793 aa16.58■□□□□ 0.24
CCNL1-217ENST00000476367 CAPN15O75808 1086 aa16.58■□□□□ 0.24
CCNL1-217ENST00000476367 CCL5P13501 91 aa16.58■□□□□ 0.24
CCNL1-217ENST00000476367 SSRP1Q08945 709 aaKnown RBP16.58■□□□□ 0.24
CCNL1-217ENST00000476367 MCF2L2Q86YR7 1114 aa16.58■□□□□ 0.24
CCNL1-217ENST00000476367 TINF2Q9BSI4 451 aa16.58■□□□□ 0.24
CCNL1-217ENST00000476367 ORC3Q9UBD5 711 aaPredicted RBP16.58■□□□□ 0.24
CCNL1-217ENST00000476367 HOXA13P31271 388 aaPredicted RBP16.57■□□□□ 0.24
CCNL1-217ENST00000476367 SOX10P56693 466 aa16.57■□□□□ 0.24
CCNL1-217ENST00000476367 MAP3K21Q5TCX8 1036 aa16.57■□□□□ 0.24
CCNL1-217ENST00000476367 RNF208Q9H0X6 261 aa16.57■□□□□ 0.24
CCNL1-217ENST00000476367 COL20A1Q9P218 1284 aa16.57■□□□□ 0.24
CCNL1-217ENST00000476367 DEXIO95424 95 aa16.56■□□□□ 0.24
CCNL1-217ENST00000476367 CCND3P30281 292 aaPredicted RBP16.56■□□□□ 0.24
CCNL1-217ENST00000476367 AKAP17AQ02040 695 aaKnown RBP16.56■□□□□ 0.24
CCNL1-217ENST00000476367 GHRHRQ02643 423 aa16.56■□□□□ 0.24
CCNL1-217ENST00000476367 PRAMEF19Q5SWL8 479 aa16.56■□□□□ 0.24
CCNL1-217ENST00000476367 ARMCX2Q7L311 632 aa16.56■□□□□ 0.24
CCNL1-217ENST00000476367 ZNF467Q7Z7K2 595 aaPredicted RBP16.56■□□□□ 0.24
CCNL1-217ENST00000476367 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.56■□□□□ 0.248e-7■■■□□ 19.1
CCNL1-217ENST00000476367 HMX1Q9NP08 348 aaPredicted RBP16.56■□□□□ 0.24
CCNL1-217ENST00000476367 VPS54Q9P1Q0 977 aa16.56■□□□□ 0.24
CCNL1-217ENST00000476367 RBM19Q9Y4C8 960 aaKnown RBP16.56■□□□□ 0.24
CCNL1-217ENST00000476367 RPTORQ8N122 1335 aa16.56■□□□□ 0.24
CCNL1-217ENST00000476367 MEIS2O14770 477 aa16.56■□□□□ 0.24
CCNL1-217ENST00000476367 CDKL5O76039 1030 aa16.56■□□□□ 0.24
CCNL1-217ENST00000476367 CYBAP13498 195 aa16.56■□□□□ 0.24
CCNL1-217ENST00000476367 CNGA1P29973 690 aa16.56■□□□□ 0.24
CCNL1-217ENST00000476367 ALDH5A1P51649 535 aaPredicted RBP16.56■□□□□ 0.24
CCNL1-217ENST00000476367 NAPAP54920 295 aa16.56■□□□□ 0.24
CCNL1-217ENST00000476367 CPLX2Q6PUV4 134 aaKnown RBP16.56■□□□□ 0.24
CCNL1-217ENST00000476367 RGS22Q8NE09 1264 aa16.56■□□□□ 0.24
CCNL1-217ENST00000476367 SYTL5Q8TDW5 730 aaPredicted RBP16.56■□□□□ 0.24
CCNL1-217ENST00000476367 TMEM106CQ9BVX2 250 aa16.56■□□□□ 0.24
CCNL1-217ENST00000476367 ADD3Q9UEY8 706 aaKnown RBP16.56■□□□□ 0.24
CCNL1-217ENST00000476367 SYNGAP1Q96PV0 1343 aa16.55■□□□□ 0.24
CCNL1-217ENST00000476367 IGHA2P01877 340 aa16.55■□□□□ 0.24
CCNL1-217ENST00000476367 HSD17B4P51659 736 aa16.55■□□□□ 0.24
CCNL1-217ENST00000476367 MAMDC4Q6UXC1 1216 aa16.55■□□□□ 0.24
CCNL1-217ENST00000476367 HSCBQ8IWL3 235 aa16.55■□□□□ 0.24
CCNL1-217ENST00000476367 TRIM22Q8IYM9 498 aa16.55■□□□□ 0.24
CCNL1-217ENST00000476367 TRPV1Q8NER1 839 aa16.55■□□□□ 0.24
CCNL1-217ENST00000476367 INTS4Q96HW7 963 aaKnown RBP16.55■□□□□ 0.24
CCNL1-217ENST00000476367 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.55■□□□□ 0.24
CCNL1-217ENST00000476367 RBM27Q9P2N5 1060 aaKnown RBP16.55■□□□□ 0.24
CCNL1-217ENST00000476367 ZHX1Q9UKY1 873 aaPredicted RBP16.55■□□□□ 0.24
CCNL1-217ENST00000476367 CNPY2Q9Y2B0 182 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms