RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 FRMPD2Q68DX3 1309 aaPredicted RBP14.41□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.41□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.41□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 DYNC1LI2O43237 492 aaPredicted RBP14.41□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 EDNRBP24530 442 aa14.41□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 MFAP1P55081 439 aaKnown RBP14.41□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 RGS22Q8NE09 1264 aa14.41□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 EXOC6Q8TAG9 804 aa14.41□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 VTI1AQ96AJ9 217 aa14.41□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 VWCEQ96DN2 955 aa14.41□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 MAF1Q9H063 256 aa14.41□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 RNF41Q9H4P4 317 aaPredicted RBP14.41□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 ADD3Q9UEY8 706 aaKnown RBP14.41□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 SPTBN5Q9NRC6 3674 aaKnown RBP14.4□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 CHD7Q9P2D1 2997 aa14.4□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 CSF2RAP15509 400 aa14.4□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 RPS6P62753 249 aaKnown RBP14.4□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 PPIGQ13427 754 aaKnown RBP eCLIP14.4□□□□□ -0.18e-8■■□□□ 12.3
MSH5-SAPCD1-205ENST00000476085 ITGA7Q13683 1181 aa14.4□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 GPATCH4Q5T3I0 446 aaKnown RBP14.4□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 KIAA1211Q6ZU35 1233 aa14.4□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 EEPD1Q7L9B9 569 aa14.4□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 ESR2Q92731 530 aa14.4□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 DSCC1Q9BVC3 393 aa14.4□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 AP5M1Q9H0R1 490 aa14.4□□□□□ -0.1
MSH5-SAPCD1-205ENST00000476085 MYH6P13533 1939 aa14.39□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 ZNF213O14771 459 aa14.39□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 CWC27Q6UX04 472 aaKnown RBP14.39□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 SLC30A10Q6XR72 485 aa14.39□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 NOL8Q76FK4 1167 aaKnown RBP14.39□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 DNERQ8NFT8 737 aa14.39□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 WDR11Q9BZH6 1224 aa14.39□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 ZSWIM5Q9P217 1185 aa14.39□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 TLR3O15455 904 aaKnown RBP14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 ZEB2O60315 1214 aa14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 DNAJB2P25686 324 aa14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 CYP2C18P33260 490 aa14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 CCDC178Q5BJE1 867 aa14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 RNF207Q6ZRF8 634 aa14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 ZNF365Q70YC5 407 aa14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 TMEM199Q8N511 208 aa14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 HERVK_113Q902F9 699 aa14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 ZKSCAN3Q9BRR0 538 aa14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 NOC4LQ9BVI4 516 aaKnown RBP14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 IL25Q9H293 177 aa14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 IL23AQ9NPF7 189 aa14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 UMODL1Q5DID0 1318 aa14.38□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 KIAA1217Q5T5P2 1943 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 PTPDC1A2A3K4 754 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 HIP1O00291 1037 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 B4GALT4O60513 344 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 KDM4AO75164 1064 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 PSMC6P62333 389 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 PURAQ00577 322 aaKnown RBP14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 GRIN2CQ14957 1233 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 ENAHQ8N8S7 591 aaPredicted RBP14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 PNMA1Q8ND90 353 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 MYLIPQ8WY64 445 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 ZSCAN10Q96SZ4 725 aaPredicted RBP14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 PPP1R12CQ9BZL4 782 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 UBA5Q9GZZ9 404 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 TRPV6Q9H1D0 765 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 CPVLQ9H3G5 476 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 TTC28Q96AY4 2481 aa14.37□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 GBF1Q92538 1859 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 A6NJR5 290 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 B4E1Z4 1266 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 NKRFO15226 690 aaKnown RBP eCLIP14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 GOLGA8HP0CJ92 632 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 ACRP10323 421 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 CALML3P27482 149 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 CCDC62Q6P9F0 684 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 PSRC1Q6PGN9 363 aaPredicted RBP14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 IQCA1Q86XH1 822 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 ADGRF4Q8IZF3 695 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 MAFAQ8NHW3 353 aaPredicted RBP14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 TBC1D5Q92609 795 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 PBX4Q9BYU1 374 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 WNT8AQ9H1J5 351 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 ALDH8A1Q9H2A2 487 aaPredicted RBP14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 HIPK3Q9H422 1215 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 DIAPH3Q9NSV4 1193 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 POLR3EQ9NVU0 708 aa14.36□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 TET1Q8NFU7 2136 aa14.35□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 TRIP12Q14669 1992 aaPredicted RBP14.35□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 BAZ2BQ9UIF8 2168 aaKnown RBP14.35□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 GRXCR1A8MXD5 290 aa14.35□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 PDE4AP27815 886 aa14.35□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 PBX2P40425 430 aa14.35□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 SEC23AQ15436 765 aa14.35□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 SCFD2Q8WU76 684 aa14.35□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 MTMR8Q96EF0 704 aa14.35□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 COL25A1Q9BXS0 654 aaPredicted RBP14.35□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 ZNF576Q9H609 170 aa14.35□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 CXXC1Q9P0U4 656 aaPredicted RBP14.35□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 SCN5AQ14524 2016 aa14.34□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 MUC3AQ02505 3323 aa14.34□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 ARIH2O95376 493 aa14.34□□□□□ -0.11
MSH5-SAPCD1-205ENST00000476085 GSPT1P15170 499 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms