RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 PSMC6P62333 389 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 MCMDC2Q4G0Z9 681 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 AKNAD1Q5T1N1 836 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 OTOP2Q7RTS6 562 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 TICAM2Q86XR7 235 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 PURBQ96QR8 312 aaKnown RBP12.76□□□□□ -0.37
CDRT1-205ENST00000475944 MPHOSPH6Q99547 160 aaKnown RBP12.76□□□□□ -0.37
CDRT1-205ENST00000475944 TMEM47Q9BQJ4 181 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 WDR11Q9BZH6 1224 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 TRPV6Q9H1D0 765 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 ALDH8A1Q9H2A2 487 aaPredicted RBP12.76□□□□□ -0.37
CDRT1-205ENST00000475944 SLC28A3Q9HAS3 691 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 GPCPD1Q9NPB8 672 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 CXXC1Q9P0U4 656 aaPredicted RBP12.76□□□□□ -0.37
CDRT1-205ENST00000475944 ZMYM6O95789 1325 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 FRMPD2Q68DX3 1309 aaPredicted RBP12.76□□□□□ -0.37
CDRT1-205ENST00000475944 PDHBP11177 359 aa12.75□□□□□ -0.37
CDRT1-205ENST00000475944 PCP11498 1178 aaKnown RBP12.75□□□□□ -0.37
CDRT1-205ENST00000475944 BRDTQ58F21 947 aaPredicted RBP12.75□□□□□ -0.37
CDRT1-205ENST00000475944 TMEM63BQ5T3F8 832 aa12.75□□□□□ -0.37
CDRT1-205ENST00000475944 PPM1EQ8WY54 764 aa12.75□□□□□ -0.37
CDRT1-205ENST00000475944 RAD50Q92878 1312 aa12.75□□□□□ -0.37
CDRT1-205ENST00000475944 FAM227BQ96M60 508 aa12.75□□□□□ -0.37
CDRT1-205ENST00000475944 WNT8AQ9H1J5 351 aa12.75□□□□□ -0.37
CDRT1-205ENST00000475944 NKX2-4Q9H2Z4 354 aa12.75□□□□□ -0.37
CDRT1-205ENST00000475944 GPHNQ9NQX3 736 aaPredicted RBP12.75□□□□□ -0.37
CDRT1-205ENST00000475944 SLC4A7Q9Y6M7 1214 aa12.75□□□□□ -0.37
CDRT1-205ENST00000475944 WDR19Q8NEZ3 1342 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 A0A0D9SFI3 127 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 RBM47A0AV96 593 aaKnown RBP12.74□□□□□ -0.37
CDRT1-205ENST00000475944 B4DLN1 442 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 NKRFO15226 690 aaKnown RBP eCLIP12.74□□□□□ -0.37
CDRT1-205ENST00000475944 PFKMP08237 780 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 MYL3P08590 195 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 HSPD1P10809 573 aaKnown RBP12.74□□□□□ -0.37
CDRT1-205ENST00000475944 CALML3P27482 149 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 MRPL12P52815 198 aaKnown RBP12.74□□□□□ -0.37
CDRT1-205ENST00000475944 RRP1P56182 461 aaKnown RBP12.74□□□□□ -0.37
CDRT1-205ENST00000475944 PURAQ00577 322 aaKnown RBP12.74□□□□□ -0.37
CDRT1-205ENST00000475944 PDE4DQ08499 809 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 PPP2R5BQ15173 497 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 SLC30A10Q6XR72 485 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 RNF207Q6ZRF8 634 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 DNERQ8NFT8 737 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 OR6J1Q8NGC5 347 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 ATXN2LQ8WWM7 1075 aaKnown RBP12.74□□□□□ -0.37
CDRT1-205ENST00000475944 TTC14Q96N46 770 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 PRDM6Q9NQX0 595 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 THEGQ9P2T0 379 aa12.74□□□□□ -0.37
CDRT1-205ENST00000475944 TNKSO95271 1327 aa12.73□□□□□ -0.37
CDRT1-205ENST00000475944 CCDC171Q6TFL3 1326 aa12.73□□□□□ -0.37
CDRT1-205ENST00000475944 ZBBXA8MT70 800 aa12.73□□□□□ -0.37
CDRT1-205ENST00000475944 IGFBP4P22692 258 aa12.73□□□□□ -0.37
CDRT1-205ENST00000475944 MFAP1P55081 439 aaKnown RBP12.73□□□□□ -0.37
CDRT1-205ENST00000475944 ZNF543Q08ER8 600 aa12.73□□□□□ -0.37
CDRT1-205ENST00000475944 PPP2R2DQ66LE6 453 aa12.73□□□□□ -0.37
CDRT1-205ENST00000475944 MFSD6Q6ZSS7 791 aa12.73□□□□□ -0.37
CDRT1-205ENST00000475944 SCFD2Q8WU76 684 aa12.73□□□□□ -0.37
CDRT1-205ENST00000475944 CLEC4DQ8WXI8 215 aa12.73□□□□□ -0.37
CDRT1-205ENST00000475944 SCLYQ96I15 445 aa12.73□□□□□ -0.37
CDRT1-205ENST00000475944 MTG1Q9BT17 334 aaPredicted RBP12.73□□□□□ -0.37
CDRT1-205ENST00000475944 RNF41Q9H4P4 317 aaPredicted RBP12.73□□□□□ -0.37
CDRT1-205ENST00000475944 YBX2Q9Y2T7 364 aaKnown RBP12.73□□□□□ -0.37
CDRT1-205ENST00000475944 PRUNE2Q8WUY3 3088 aa12.73□□□□□ -0.37
CDRT1-205ENST00000475944 TRIM6-TRIM34B2RNG4 842 aa12.72□□□□□ -0.37
CDRT1-205ENST00000475944 KPNA6O60684 536 aa12.72□□□□□ -0.37
CDRT1-205ENST00000475944 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
CDRT1-205ENST00000475944 CYP2C9P11712 490 aa12.72□□□□□ -0.37
CDRT1-205ENST00000475944 ATP2A2P16615 1042 aaKnown RBP12.72□□□□□ -0.37
CDRT1-205ENST00000475944 EDNRBP24530 442 aa12.72□□□□□ -0.37
CDRT1-205ENST00000475944 HAND2P61296 217 aa12.72□□□□□ -0.37
CDRT1-205ENST00000475944 RPS6P62753 249 aaKnown RBP12.72□□□□□ -0.37
CDRT1-205ENST00000475944 NMIQ13287 307 aaPredicted RBP12.72□□□□□ -0.37
CDRT1-205ENST00000475944 HDAC1Q13547 482 aaPredicted RBP12.72□□□□□ -0.37
CDRT1-205ENST00000475944 ADGRE1Q14246 886 aa12.72□□□□□ -0.37
CDRT1-205ENST00000475944 FAM47CQ5HY64 1035 aa12.72□□□□□ -0.37
CDRT1-205ENST00000475944 GPATCH4Q5T3I0 446 aaKnown RBP12.72□□□□□ -0.37
CDRT1-205ENST00000475944 ZNF589Q86UQ0 364 aaPredicted RBP12.72□□□□□ -0.37
CDRT1-205ENST00000475944 ESR2Q92731 530 aa12.72□□□□□ -0.37
CDRT1-205ENST00000475944 TRMT13Q9NUP7 481 aaKnown RBP12.72□□□□□ -0.37
CDRT1-205ENST00000475944 PCDHA11Q9Y5I1 949 aa12.72□□□□□ -0.37
CDRT1-205ENST00000475944 VCANP13611 3396 aa12.72□□□□□ -0.37
CDRT1-205ENST00000475944 GBF1Q92538 1859 aa12.72□□□□□ -0.37
CDRT1-205ENST00000475944 TNFRSF10AO00220 468 aa12.71□□□□□ -0.37
CDRT1-205ENST00000475944 ACTN1P12814 892 aa12.71□□□□□ -0.37
CDRT1-205ENST00000475944 RFC2P35250 354 aa12.71□□□□□ -0.37
CDRT1-205ENST00000475944 NT5C2P49902 561 aa12.71□□□□□ -0.37
CDRT1-205ENST00000475944 RABGGTBP53611 331 aa12.71□□□□□ -0.37
CDRT1-205ENST00000475944 MRPS5P82675 430 aaKnown RBP12.71□□□□□ -0.37
CDRT1-205ENST00000475944 PTPN11Q06124 597 aaPredicted RBP12.71□□□□□ -0.37
CDRT1-205ENST00000475944 NFRKBQ6P4R8 1299 aa12.71□□□□□ -0.37
CDRT1-205ENST00000475944 ASB2Q96Q27 587 aa12.71□□□□□ -0.37
CDRT1-205ENST00000475944 CRBNQ96SW2 442 aa12.71□□□□□ -0.37
CDRT1-205ENST00000475944 MAF1Q9H063 256 aa12.71□□□□□ -0.37
CDRT1-205ENST00000475944 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
CDRT1-205ENST00000475944 A6NJR5 290 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 TXNP10599 105 aaKnown RBP12.7□□□□□ -0.38
CDRT1-205ENST00000475944 TTLL4Q14679 1199 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 CCDC85BQ15834 202 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms