RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 NOVP48745 357 aa18.58■□□□□ 0.56
CDPF1-206ENST00000475605 PPP1R13LQ8WUF5 828 aa18.58■□□□□ 0.56
CDPF1-206ENST00000475605 DCAF4Q8WV16 495 aa18.58■□□□□ 0.56
CDPF1-206ENST00000475605 ALDH8A1Q9H2A2 487 aaPredicted RBP18.58■□□□□ 0.56
CDPF1-206ENST00000475605 MTIF3Q9H2K0 278 aaKnown RBP18.58■□□□□ 0.56
CDPF1-206ENST00000475605 SLC28A3Q9HAS3 691 aa18.58■□□□□ 0.56
CDPF1-206ENST00000475605 ANAPC4Q9UJX5 808 aa18.58■□□□□ 0.56
CDPF1-206ENST00000475605 FRMPD2Q68DX3 1309 aaPredicted RBP18.57■□□□□ 0.56
CDPF1-206ENST00000475605 SALL3Q9BXA9 1300 aa18.57■□□□□ 0.56
CDPF1-206ENST00000475605 ALDH5A1P51649 535 aaPredicted RBP18.57■□□□□ 0.56
CDPF1-206ENST00000475605 DUSP28Q4G0W2 176 aa18.57■□□□□ 0.56
CDPF1-206ENST00000475605 EXOC6Q8TAG9 804 aa18.57■□□□□ 0.56
CDPF1-206ENST00000475605 ATXN2LQ8WWM7 1075 aaKnown RBP18.57■□□□□ 0.56
CDPF1-206ENST00000475605 ASB2Q96Q27 587 aa18.57■□□□□ 0.56
CDPF1-206ENST00000475605 WDR11Q9BZH6 1224 aa18.57■□□□□ 0.56
CDPF1-206ENST00000475605 RWDD1Q9H446 243 aaPredicted RBP18.57■□□□□ 0.56
CDPF1-206ENST00000475605 GPCPD1Q9NPB8 672 aa18.57■□□□□ 0.56
CDPF1-206ENST00000475605 TRMT13Q9NUP7 481 aaKnown RBP18.57■□□□□ 0.56
CDPF1-206ENST00000475605 THEGQ9P2T0 379 aa18.57■□□□□ 0.56
CDPF1-206ENST00000475605 ORC4O43929 436 aa18.56■□□□□ 0.56
CDPF1-206ENST00000475605 FGRP09769 529 aa18.56■□□□□ 0.56
CDPF1-206ENST00000475605 CYP2C9P11712 490 aa18.56■□□□□ 0.56
CDPF1-206ENST00000475605 RRP12Q5JTH9 1297 aaKnown RBP18.56■□□□□ 0.56
CDPF1-206ENST00000475605 SYDE2Q5VT97 1194 aa18.56■□□□□ 0.56
CDPF1-206ENST00000475605 BTNL9Q6UXG8 535 aa18.56■□□□□ 0.56
CDPF1-206ENST00000475605 SLC30A10Q6XR72 485 aa18.56■□□□□ 0.56
CDPF1-206ENST00000475605 RPUSD2Q8IZ73 545 aaKnown RBP18.56■□□□□ 0.56
CDPF1-206ENST00000475605 TMEM47Q9BQJ4 181 aa18.56■□□□□ 0.56
CDPF1-206ENST00000475605 TOMM22Q9NS69 142 aa18.56■□□□□ 0.56
CDPF1-206ENST00000475605 SLC4A7Q9Y6M7 1214 aa18.56■□□□□ 0.56
CDPF1-206ENST00000475605 PTPDC1A2A3K4 754 aa18.55■□□□□ 0.56
CDPF1-206ENST00000475605 ZBBXA8MT70 800 aa18.55■□□□□ 0.56
CDPF1-206ENST00000475605 MYL3P08590 195 aa18.55■□□□□ 0.56
CDPF1-206ENST00000475605 PURAQ00577 322 aaKnown RBP18.55■□□□□ 0.56
CDPF1-206ENST00000475605 TTLL4Q14679 1199 aa18.55■□□□□ 0.56
CDPF1-206ENST00000475605 CLEC4DQ8WXI8 215 aa18.55■□□□□ 0.56
CDPF1-206ENST00000475605 SEZ6LQ9BYH1 1024 aa18.55■□□□□ 0.56
CDPF1-206ENST00000475605 ADD3Q9UEY8 706 aaKnown RBP18.55■□□□□ 0.56
CDPF1-206ENST00000475605 RBM47A0AV96 593 aaKnown RBP18.54■□□□□ 0.56
CDPF1-206ENST00000475605 FGAP02671 866 aa18.54■□□□□ 0.56
CDPF1-206ENST00000475605 TOP1P11387 765 aaKnown RBP18.54■□□□□ 0.56
CDPF1-206ENST00000475605 CALML3P27482 149 aa18.54■□□□□ 0.56
CDPF1-206ENST00000475605 HDAC1Q13547 482 aaPredicted RBP18.54■□□□□ 0.56
CDPF1-206ENST00000475605 DEFB128Q7Z7B8 93 aa18.54■□□□□ 0.56
CDPF1-206ENST00000475605 CHD9Q3L8U1 2897 aa18.54■□□□□ 0.56
CDPF1-206ENST00000475605 MUC3AQ02505 3323 aa18.54■□□□□ 0.56
CDPF1-206ENST00000475605 SCN5AQ14524 2016 aa18.54■□□□□ 0.56
CDPF1-206ENST00000475605 TNKSO95271 1327 aa18.53■□□□□ 0.56
CDPF1-206ENST00000475605 IRX6P78412 446 aaPredicted RBP18.53■□□□□ 0.56
CDPF1-206ENST00000475605 MRPS5P82675 430 aaKnown RBP18.53■□□□□ 0.56
CDPF1-206ENST00000475605 ALX1Q15699 326 aa18.53■□□□□ 0.56
CDPF1-206ENST00000475605 PPP2R2DQ66LE6 453 aa18.53■□□□□ 0.56
CDPF1-206ENST00000475605 OR6J1Q8NGC5 347 aa18.53■□□□□ 0.56
CDPF1-206ENST00000475605 ADAMTS19Q8TE59 1207 aa18.53■□□□□ 0.56
CDPF1-206ENST00000475605 COPS5Q92905 334 aa18.53■□□□□ 0.56
CDPF1-206ENST00000475605 FAM227BQ96M60 508 aa18.53■□□□□ 0.56
CDPF1-206ENST00000475605 POLR3EQ9NVU0 708 aa18.53■□□□□ 0.56
CDPF1-206ENST00000475605 PCDHA11Q9Y5I1 949 aa18.53■□□□□ 0.56
CDPF1-206ENST00000475605 A0A0D9SFI3 127 aa18.52■□□□□ 0.56
CDPF1-206ENST00000475605 RFXAPO00287 272 aa18.52■□□□□ 0.56
CDPF1-206ENST00000475605 ATP2A2P16615 1042 aaKnown RBP18.52■□□□□ 0.56
CDPF1-206ENST00000475605 NBPF20Q3BBV1 942 aa18.52■□□□□ 0.56
CDPF1-206ENST00000475605 FAM47CQ5HY64 1035 aa18.52■□□□□ 0.56
CDPF1-206ENST00000475605 ANKRD45Q5TZF3 282 aa18.52■□□□□ 0.56
CDPF1-206ENST00000475605 RNF207Q6ZRF8 634 aa18.52■□□□□ 0.56
CDPF1-206ENST00000475605 MICALL1Q8N3F8 863 aa18.52■□□□□ 0.56
CDPF1-206ENST00000475605 EVI5LQ96CN4 794 aa18.52■□□□□ 0.56
CDPF1-206ENST00000475605 HELLSQ9NRZ9 838 aa18.52■□□□□ 0.56
CDPF1-206ENST00000475605 SUPT20HL2P0C7V6 817 aa18.51■□□□□ 0.55
CDPF1-206ENST00000475605 PDHBP11177 359 aa18.51■□□□□ 0.55
CDPF1-206ENST00000475605 COL9A1P20849 921 aa18.51■□□□□ 0.55
CDPF1-206ENST00000475605 CPT1AP50416 773 aa18.51■□□□□ 0.55
CDPF1-206ENST00000475605 HAND2P61296 217 aa18.51■□□□□ 0.55
CDPF1-206ENST00000475605 RPS6P62753 249 aaKnown RBP18.51■□□□□ 0.55
CDPF1-206ENST00000475605 PDE4DQ08499 809 aa18.51■□□□□ 0.55
CDPF1-206ENST00000475605 MTG1Q9BT17 334 aaPredicted RBP18.51■□□□□ 0.55
CDPF1-206ENST00000475605 CERS4Q9HA82 394 aa18.51■□□□□ 0.55
CDPF1-206ENST00000475605 GPHNQ9NQX3 736 aaPredicted RBP18.51■□□□□ 0.55
CDPF1-206ENST00000475605 TCP11L1Q9NUJ3 509 aa18.51■□□□□ 0.55
CDPF1-206ENST00000475605 RAPGEFL1Q9UHV5 662 aa18.51■□□□□ 0.55
CDPF1-206ENST00000475605 LOC102724159A0A0B4J2E5 919 aa18.5■□□□□ 0.55
CDPF1-206ENST00000475605 HSPD1P10809 573 aaKnown RBP18.5■□□□□ 0.55
CDPF1-206ENST00000475605 PWP2Q15269 919 aaKnown RBP18.5■□□□□ 0.55
CDPF1-206ENST00000475605 ZNF589Q86UQ0 364 aaPredicted RBP18.5■□□□□ 0.55
CDPF1-206ENST00000475605 UHRF1Q96T88 793 aaPredicted RBP18.5■□□□□ 0.55
CDPF1-206ENST00000475605 SCN10AQ9Y5Y9 1956 aa18.5■□□□□ 0.55
CDPF1-206ENST00000475605 CA3P07451 260 aa18.49■□□□□ 0.55
CDPF1-206ENST00000475605 PFKMP08237 780 aa18.49■□□□□ 0.55
CDPF1-206ENST00000475605 PDE1AP54750 535 aa18.49■□□□□ 0.55
CDPF1-206ENST00000475605 ZNF543Q08ER8 600 aa18.49■□□□□ 0.55
CDPF1-206ENST00000475605 NMIQ13287 307 aaPredicted RBP18.49■□□□□ 0.55
CDPF1-206ENST00000475605 PPP2R5BQ15173 497 aa18.49■□□□□ 0.55
CDPF1-206ENST00000475605 MCMDC2Q4G0Z9 681 aa18.49■□□□□ 0.55
CDPF1-206ENST00000475605 NECAB3Q96P71 396 aaPredicted RBP18.49■□□□□ 0.55
CDPF1-206ENST00000475605 CPVLQ9H3G5 476 aa18.49■□□□□ 0.55
CDPF1-206ENST00000475605 TCF20Q9UGU0 1960 aaKnown RBP18.48■□□□□ 0.55
CDPF1-206ENST00000475605 EPOPA6NHQ4 379 aa18.48■□□□□ 0.55
CDPF1-206ENST00000475605 A6NJR5 290 aa18.48■□□□□ 0.55
CDPF1-206ENST00000475605 RBAK-RBAKDNI3L0D1 243 aa18.48■□□□□ 0.55
CDPF1-206ENST00000475605 ARHGEF15O94989 841 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms