RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 USP53Q70EK8 1073 aa8.36□□□□□ -1.07
TM9SF3-204ENST00000475401 NOP9Q86U38 636 aaKnown RBP8.36□□□□□ -1.07
TM9SF3-204ENST00000475401 NLRX1Q86UT6 975 aa8.36□□□□□ -1.07
TM9SF3-204ENST00000475401 USP33Q8TEY7 942 aa8.36□□□□□ -1.07
TM9SF3-204ENST00000475401 RNF32Q9H0A6 362 aa8.36□□□□□ -1.07
TM9SF3-204ENST00000475401 TRBV23-1A0A0A0MS06 115 aa8.35□□□□□ -1.07
TM9SF3-204ENST00000475401 DLX3O60479 287 aa8.35□□□□□ -1.07
TM9SF3-204ENST00000475401 PNLIPP16233 465 aa8.35□□□□□ -1.07
TM9SF3-204ENST00000475401 SLC35F1Q5T1Q4 408 aa8.35□□□□□ -1.07
TM9SF3-204ENST00000475401 MCTP1Q6DN14 999 aa8.35□□□□□ -1.07
TM9SF3-204ENST00000475401 CABP7Q86V35 215 aa8.35□□□□□ -1.07
TM9SF3-204ENST00000475401 SIRT2Q8IXJ6 389 aa8.35□□□□□ -1.07
TM9SF3-204ENST00000475401 PIF1Q9H611 641 aa8.35□□□□□ -1.07
TM9SF3-204ENST00000475401 SP110Q9HB58 689 aa8.35□□□□□ -1.07
TM9SF3-204ENST00000475401 YBX2Q9Y2T7 364 aaKnown RBP8.35□□□□□ -1.07
TM9SF3-204ENST00000475401 CCDC163A0A0D9SF12 145 aa8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 CAPNS1P04632 268 aa8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 PDE6BP35913 854 aa8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 GTF2A2P52657 109 aa8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 YOD1Q5VVQ6 348 aaPredicted RBP8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 LILRB2Q8N423 598 aa8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 LZTR1Q8N653 840 aa8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 NLGN2Q8NFZ4 835 aa8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 DCAF4Q8WV16 495 aa8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 OSBP2Q969R2 916 aa8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 PLCD4Q9BRC7 762 aa8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 DHRS4Q9BTZ2 278 aa8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 PDLIM7Q9NR12 457 aa8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 ACSL6Q9UKU0 697 aa8.34□□□□□ -1.07
TM9SF3-204ENST00000475401 C7orf72A4D263 438 aa8.33□□□□□ -1.08
TM9SF3-204ENST00000475401 NOTOA8MTQ0 251 aa8.33□□□□□ -1.08
TM9SF3-204ENST00000475401 RPL11P62913 178 aaKnown RBP8.33□□□□□ -1.08
TM9SF3-204ENST00000475401 KREMEN2Q8NCW0 462 aa8.33□□□□□ -1.08
TM9SF3-204ENST00000475401 CHAMP1Q96JM3 812 aa8.33□□□□□ -1.08
TM9SF3-204ENST00000475401 TIMM13Q9Y5L4 95 aaPredicted RBP8.33□□□□□ -1.08
TM9SF3-204ENST00000475401 IGSF3O75054 1194 aa8.32□□□□□ -1.08
TM9SF3-204ENST00000475401 MPOP05164 745 aa8.32□□□□□ -1.08
TM9SF3-204ENST00000475401 TMEM62Q0P6H9 643 aa8.32□□□□□ -1.08
TM9SF3-204ENST00000475401 FAM209AQ5JX71 171 aa8.32□□□□□ -1.08
TM9SF3-204ENST00000475401 ADGRF1Q5T601 910 aa8.32□□□□□ -1.08
TM9SF3-204ENST00000475401 BICRALQ6AI39 1079 aa8.32□□□□□ -1.08
TM9SF3-204ENST00000475401 RSPO2Q6UXX9 243 aaPredicted RBP8.32□□□□□ -1.08
TM9SF3-204ENST00000475401 SH3TC2Q8TF17 1288 aa8.32□□□□□ -1.08
TM9SF3-204ENST00000475401 C1orf159Q96HA4 380 aa8.32□□□□□ -1.08
TM9SF3-204ENST00000475401 INTS4Q96HW7 963 aaKnown RBP8.32□□□□□ -1.08
TM9SF3-204ENST00000475401 BTG4Q9NY30 223 aa8.32□□□□□ -1.08
TM9SF3-204ENST00000475401 GULP1Q9UBP9 304 aa8.32□□□□□ -1.08
TM9SF3-204ENST00000475401 PTCH2Q9Y6C5 1203 aa8.32□□□□□ -1.08
TM9SF3-204ENST00000475401 OR14I1A6ND48 311 aa8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 CEBPAP49715 358 aaPredicted RBP8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 GALK1P51570 392 aa8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 MVKQ03426 396 aa8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 CYP4F3Q08477 520 aa8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 TESK1Q15569 626 aa8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 OLFML2BQ68BL8 750 aa8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 IRF2BP1Q8IU81 584 aa8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 JMYQ8N9B5 988 aa8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 PHF20Q9BVI0 1012 aa8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 GPR27Q9NS67 375 aa8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 MRPS23Q9Y3D9 190 aaKnown RBP8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 RWDD3Q9Y3V2 267 aa8.31□□□□□ -1.08
TM9SF3-204ENST00000475401 PAX4O43316 350 aa8.3□□□□□ -1.08
TM9SF3-204ENST00000475401 TACR1P25103 407 aa8.3□□□□□ -1.08
TM9SF3-204ENST00000475401 INF2Q27J81 1249 aa8.3□□□□□ -1.08
TM9SF3-204ENST00000475401 CCDC103Q8IW40 242 aa8.3□□□□□ -1.08
TM9SF3-204ENST00000475401 SHISA4Q96DD7 197 aa8.3□□□□□ -1.08
TM9SF3-204ENST00000475401 LIN37Q96GY3 246 aaPredicted RBP8.3□□□□□ -1.08
TM9SF3-204ENST00000475401 ZFYVE21Q9BQ24 234 aa8.3□□□□□ -1.08
TM9SF3-204ENST00000475401 TMEFF2Q9UIK5 374 aaPredicted RBP8.3□□□□□ -1.08
TM9SF3-204ENST00000475401 PCDHA2Q9Y5H9 948 aa8.3□□□□□ -1.08
TM9SF3-204ENST00000475401 LRRC10BA6NIK2 292 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 FUCA1P04066 466 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 NAT1P18440 290 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 GABREP78334 506 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 LSAMPQ13449 338 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 FOXB2Q5VYV0 432 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 MBLAC2Q68D91 279 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 DENND5AQ6IQ26 1287 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 MAMDC2Q7Z304 686 aaPredicted RBP8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 IFNL3Q8IZI9 196 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 RCBTB1Q8NDN9 531 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 PTPRN2Q92932 1015 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 TMEM169Q96HH4 297 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 EXOC2Q96KP1 924 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 MARCH2Q9P0N8 246 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 DBR1Q9UK59 544 aaKnown RBP8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 COA3Q9Y2R0 106 aaPredicted RBP8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 TMA7Q9Y2S6 64 aaKnown RBP8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 NPFFR2Q9Y5X5 522 aa8.29□□□□□ -1.08
TM9SF3-204ENST00000475401 AQP7O14520 342 aa8.28□□□□□ -1.08
TM9SF3-204ENST00000475401 ABLIM1O14639 778 aa8.28□□□□□ -1.08
TM9SF3-204ENST00000475401 KIR3DS1Q14943 382 aa8.28□□□□□ -1.08
TM9SF3-204ENST00000475401 NR1I3Q14994 352 aa8.28□□□□□ -1.08
TM9SF3-204ENST00000475401 STYK1Q6J9G0 422 aa8.28□□□□□ -1.08
TM9SF3-204ENST00000475401 HOMER1Q86YM7 354 aa8.28□□□□□ -1.08
TM9SF3-204ENST00000475401 TRMT2BQ96GJ1 504 aaKnown RBP8.28□□□□□ -1.08
TM9SF3-204ENST00000475401 ALG1Q9BT22 464 aa8.28□□□□□ -1.08
TM9SF3-204ENST00000475401 EPB41L4BQ9H329 900 aa8.28□□□□□ -1.08
TM9SF3-204ENST00000475401 NUDT5Q9UKK9 219 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms