RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SNX1Q13596 522 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 LRRC41Q15345 812 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 MUM1L1Q5H9M0 696 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 TRIM68Q6AZZ1 485 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 LARSQ9P2J5 1176 aaKnown RBP11.99□□□□□ -0.49
VAPB-204ENST00000475243 MAP3K15Q6ZN16 1313 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 CLIC2O15247 247 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 TLR3O15455 904 aaKnown RBP11.98□□□□□ -0.49
VAPB-204ENST00000475243 SESN3P58005 492 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 GOLGA5Q8TBA6 731 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 SSH3Q8TE77 659 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 CNOT6LQ96LI5 555 aaKnown RBP11.98□□□□□ -0.49
VAPB-204ENST00000475243 MTMR6Q9Y217 621 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 HNRNPDLO14979 420 aaKnown RBP11.98□□□□□ -0.49
VAPB-204ENST00000475243 MYL7Q01449 175 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 POTEDQ86YR6 584 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 PDE8BO95263 885 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 RYBPQ8N488 228 aaPredicted RBP11.98□□□□□ -0.49
VAPB-204ENST00000475243 HYOU1Q9Y4L1 999 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 WDR62O43379 1518 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 A6NJR5 290 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 ENC1O14682 589 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 ADCK5Q3MIX3 580 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 GRK7Q8WTQ7 553 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 KRT26Q7Z3Y9 468 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 SEC31BQ9NQW1 1179 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 ESYT2A0FGR8 921 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 INO80B-WBP1J3KQ70 363 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 ATF2P15336 505 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 GNGT1P63211 74 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 INO80BQ9C086 356 aaPredicted RBP11.98□□□□□ -0.49
VAPB-204ENST00000475243 CCDC68Q9H2F9 335 aa11.98□□□□□ -0.49
VAPB-204ENST00000475243 CMA1P23946 247 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 CASP2P42575 452 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 RINT1Q6NUQ1 792 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 MIGA2Q7L4E1 593 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 ABI1Q8IZP0 508 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 GPT2Q8TD30 523 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 FNDC3AQ9Y2H6 1198 aaKnown RBP11.97□□□□□ -0.49
VAPB-204ENST00000475243 GTPBP6O43824 516 aaPredicted RBP11.97□□□□□ -0.49
VAPB-204ENST00000475243 OSTNP61366 133 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 ADCY1Q08828 1119 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 FAM26FQ5R3K3 315 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 C7orf31Q8N865 590 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 ATP7AQ04656 1500 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 A0A1B0GUA9 196 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 N4BP1O75113 896 aaKnown RBP11.97□□□□□ -0.49
VAPB-204ENST00000475243 RAD17O75943 681 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 ARHGAP25P42331 645 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 HDAC11Q96DB2 347 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 TRIM56Q9BRZ2 755 aaKnown RBP11.97□□□□□ -0.49
VAPB-204ENST00000475243 QTRT2Q9H974 415 aaKnown RBP11.97□□□□□ -0.49
VAPB-204ENST00000475243 KIF9Q9HAQ2 790 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 NRBP2Q9NSY0 501 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 EPN1Q9Y6I3 576 aaPredicted RBP11.97□□□□□ -0.49
VAPB-204ENST00000475243 CXCR5P32302 372 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 GUCY2DQ02846 1103 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 GRAMD1CQ8IYS0 662 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 CCDC51Q96ER9 411 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 CHMP6Q96FZ7 201 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 NUB1Q9Y5A7 615 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 PLXNC1O60486 1568 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 ZMYND10O75800 440 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 PCCAP05165 728 aaPredicted RBP11.97□□□□□ -0.49
VAPB-204ENST00000475243 SNAP25P60880 206 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 FAM160B1Q5W0V3 765 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 KCTD16Q68DU8 428 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 PI4K2BQ8TCG2 481 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 COA7Q96BR5 231 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 AK9Q5TCS8 1911 aa11.97□□□□□ -0.49
VAPB-204ENST00000475243 A6NNZ2 444 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 RASSF2P50749 326 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 TUBB8Q3ZCM7 444 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 ERFEQ4G0M1 354 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 RFX6Q8HWS3 928 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.96□□□□□ -0.49
VAPB-204ENST00000475243 BCL2L12Q9HB09 334 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 PBRM1Q86U86 1689 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 DDAH1O94760 285 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 ZNF853P0CG23 659 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 CDC25AP30304 524 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 KIF11P52732 1056 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 RBM6P78332 1123 aaKnown RBP11.96□□□□□ -0.49
VAPB-204ENST00000475243 MMEL1Q495T6 779 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 ANAPC5Q9UJX4 755 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 ARHGEF12Q9NZN5 1544 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 PRAMEF22A3QJZ6 481 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 TTLL1O95922 423 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 PTK2Q05397 1052 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 SPATA1Q5VX52 437 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 TUBGCP2Q9BSJ2 902 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 NSFP46459 744 aaKnown RBP11.96□□□□□ -0.49
VAPB-204ENST00000475243 IL1RL1Q01638 556 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 FAM71BQ8TC56 605 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 DDX27Q96GQ7 796 aaKnown RBP11.96□□□□□ -0.49
VAPB-204ENST00000475243 KLHL14Q9P2G3 628 aa11.96□□□□□ -0.49
VAPB-204ENST00000475243 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.96□□□□□ -0.49
VAPB-204ENST00000475243 LONP1P36776 959 aaKnown RBP11.96□□□□□ -0.5
VAPB-204ENST00000475243 ARPP19P56211 112 aa11.96□□□□□ -0.5
VAPB-204ENST00000475243 DYNLT1P63172 113 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms