RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 GAS2L1Q99501 681 aaPredicted RBP29.35■■■□□ 2.29
TMEM54-205ENST00000475208 TCP11L1Q9NUJ3 509 aa29.35■■■□□ 2.29
TMEM54-205ENST00000475208 PTPDC1A2A3K4 754 aa29.34■■■□□ 2.29
TMEM54-205ENST00000475208 RAB30Q15771 203 aa29.34■■■□□ 2.29
TMEM54-205ENST00000475208 CRBNQ96SW2 442 aa29.34■■■□□ 2.29
TMEM54-205ENST00000475208 PRDM12Q9H4Q4 367 aa29.34■■■□□ 2.29
TMEM54-205ENST00000475208 MSRAQ9UJ68 235 aa29.34■■■□□ 2.29
TMEM54-205ENST00000475208 HSPD1P10809 573 aaKnown RBP29.33■■■□□ 2.29
TMEM54-205ENST00000475208 SLC30A10Q6XR72 485 aa29.33■■■□□ 2.29
TMEM54-205ENST00000475208 WDR11Q9BZH6 1224 aa29.33■■■□□ 2.29
TMEM54-205ENST00000475208 WNT8AQ9H1J5 351 aa29.33■■■□□ 2.29
TMEM54-205ENST00000475208 ZMYM6O95789 1325 aa29.32■■■□□ 2.28
TMEM54-205ENST00000475208 LOC102724159A0A0B4J2E5 919 aa29.32■■■□□ 2.28
TMEM54-205ENST00000475208 PDHBP11177 359 aa29.32■■■□□ 2.28
TMEM54-205ENST00000475208 HAND2P61296 217 aa29.32■■■□□ 2.28
TMEM54-205ENST00000475208 PWP2Q15269 919 aaKnown RBP29.32■■■□□ 2.28
TMEM54-205ENST00000475208 OTOP2Q7RTS6 562 aa29.32■■■□□ 2.28
TMEM54-205ENST00000475208 ZNF589Q86UQ0 364 aaPredicted RBP29.32■■■□□ 2.28
TMEM54-205ENST00000475208 CLEC4DQ8WXI8 215 aa29.32■■■□□ 2.28
TMEM54-205ENST00000475208 SYMPKQ92797 1274 aaKnown RBP29.32■■■□□ 2.28
TMEM54-205ENST00000475208 ALDH8A1Q9H2A2 487 aaPredicted RBP29.32■■■□□ 2.28
TMEM54-205ENST00000475208 CHD9Q3L8U1 2897 aa29.32■■■□□ 2.28
TMEM54-205ENST00000475208 CALML3P27482 149 aa29.31■■■□□ 2.28
TMEM54-205ENST00000475208 NMIQ13287 307 aaPredicted RBP29.31■■■□□ 2.28
TMEM54-205ENST00000475208 POLR3EQ9NVU0 708 aa29.31■■■□□ 2.28
TMEM54-205ENST00000475208 ZNF543Q08ER8 600 aa29.3■■■□□ 2.28
TMEM54-205ENST00000475208 HDAC1Q13547 482 aaPredicted RBP29.3■■■□□ 2.28
TMEM54-205ENST00000475208 NKX2-4Q9H2Z4 354 aa29.3■■■□□ 2.28
TMEM54-205ENST00000475208 CCDC171Q6TFL3 1326 aa29.29■■■□□ 2.28
TMEM54-205ENST00000475208 RBM47A0AV96 593 aaKnown RBP29.29■■■□□ 2.28
TMEM54-205ENST00000475208 TJAP1Q5JTD0 557 aa29.29■■■□□ 2.28
TMEM54-205ENST00000475208 RNF207Q6ZRF8 634 aa29.29■■■□□ 2.28
TMEM54-205ENST00000475208 TICAM2Q86XR7 235 aa29.29■■■□□ 2.28
TMEM54-205ENST00000475208 OR6J1Q8NGC5 347 aa29.29■■■□□ 2.28
TMEM54-205ENST00000475208 PPM1EQ8WY54 764 aa29.29■■■□□ 2.28
TMEM54-205ENST00000475208 SCLYQ96I15 445 aa29.29■■■□□ 2.28
TMEM54-205ENST00000475208 PRDM6Q9NQX0 595 aa29.29■■■□□ 2.28
TMEM54-205ENST00000475208 PNMA2Q9UL42 364 aa29.29■■■□□ 2.28
TMEM54-205ENST00000475208 TTC28Q96AY4 2481 aa29.29■■■□□ 2.28
TMEM54-205ENST00000475208 GBF1Q92538 1859 aa29.28■■■□□ 2.28
TMEM54-205ENST00000475208 MYL3P08590 195 aa29.28■■■□□ 2.28
TMEM54-205ENST00000475208 CPT1AP50416 773 aa29.28■■■□□ 2.28
TMEM54-205ENST00000475208 PURAQ00577 322 aaKnown RBP29.28■■■□□ 2.28
TMEM54-205ENST00000475208 AKNAD1Q5T1N1 836 aa29.28■■■□□ 2.28
TMEM54-205ENST00000475208 TBC1D10CQ8IV04 446 aa29.28■■■□□ 2.28
TMEM54-205ENST00000475208 RPUSD2Q8IZ73 545 aaKnown RBP29.28■■■□□ 2.28
TMEM54-205ENST00000475208 TRMT13Q9NUP7 481 aaKnown RBP29.28■■■□□ 2.28
TMEM54-205ENST00000475208 YBX2Q9Y2T7 364 aaKnown RBP29.28■■■□□ 2.28
TMEM54-205ENST00000475208 WDR19Q8NEZ3 1342 aa29.27■■■□□ 2.28
TMEM54-205ENST00000475208 PCP11498 1178 aaKnown RBP29.27■■■□□ 2.28
TMEM54-205ENST00000475208 PDE4DQ08499 809 aa29.27■■■□□ 2.28
TMEM54-205ENST00000475208 MFSD6Q6ZSS7 791 aa29.27■■■□□ 2.28
TMEM54-205ENST00000475208 TTC14Q96N46 770 aa29.27■■■□□ 2.28
TMEM54-205ENST00000475208 SLC28A3Q9HAS3 691 aa29.27■■■□□ 2.28
TMEM54-205ENST00000475208 TNKSO95271 1327 aa29.26■■■□□ 2.27
TMEM54-205ENST00000475208 TRIM6-TRIM34B2RNG4 842 aa29.26■■■□□ 2.27
TMEM54-205ENST00000475208 SUPT20HL2P0C7V6 817 aa29.26■■■□□ 2.27
TMEM54-205ENST00000475208 SNHG28P0DPA3 235 aa29.26■■■□□ 2.27
TMEM54-205ENST00000475208 CYP2C9P11712 490 aa29.26■■■□□ 2.27
TMEM54-205ENST00000475208 RPS6P62753 249 aaKnown RBP29.26■■■□□ 2.27
TMEM54-205ENST00000475208 ADGRE1Q14246 886 aa29.26■■■□□ 2.27
TMEM54-205ENST00000475208 PPP2R5BQ15173 497 aa29.26■■■□□ 2.27
TMEM54-205ENST00000475208 MTG1Q9BT17 334 aaPredicted RBP29.26■■■□□ 2.27
TMEM54-205ENST00000475208 LNPKQ9C0E8 428 aa29.26■■■□□ 2.27
TMEM54-205ENST00000475208 GPHNQ9NQX3 736 aaPredicted RBP29.26■■■□□ 2.27
TMEM54-205ENST00000475208 SLC4A7Q9Y6M7 1214 aa29.26■■■□□ 2.27
TMEM54-205ENST00000475208 MYO9BQ13459 2157 aa29.25■■■□□ 2.27
TMEM54-205ENST00000475208 RILPL2Q969X0 211 aa29.25■■■□□ 2.27
TMEM54-205ENST00000475208 VWCEQ96DN2 955 aa29.25■■■□□ 2.27
TMEM54-205ENST00000475208 MPHOSPH6Q99547 160 aaKnown RBP29.25■■■□□ 2.27
TMEM54-205ENST00000475208 ZBBXA8MT70 800 aa29.24■■■□□ 2.27
TMEM54-205ENST00000475208 IGFBP4P22692 258 aa29.24■■■□□ 2.27
TMEM54-205ENST00000475208 EDNRBP24530 442 aa29.24■■■□□ 2.27
TMEM54-205ENST00000475208 RABGGTBP53611 331 aa29.24■■■□□ 2.27
TMEM54-205ENST00000475208 BRDTQ58F21 947 aaPredicted RBP29.24■■■□□ 2.27
TMEM54-205ENST00000475208 DNERQ8NFT8 737 aa29.24■■■□□ 2.27
TMEM54-205ENST00000475208 RNF41Q9H4P4 317 aaPredicted RBP29.24■■■□□ 2.27
TMEM54-205ENST00000475208 NEDD4P46934 1319 aa29.23■■■□□ 2.27
TMEM54-205ENST00000475208 RAD50Q92878 1312 aa29.23■■■□□ 2.27
TMEM54-205ENST00000475208 NKRFO15226 690 aaKnown RBP eCLIP29.23■■■□□ 2.27
TMEM54-205ENST00000475208 FAM47CQ5HY64 1035 aa29.23■■■□□ 2.27
TMEM54-205ENST00000475208 SCFD2Q8WU76 684 aa29.23■■■□□ 2.27
TMEM54-205ENST00000475208 PFKMP08237 780 aa29.22■■■□□ 2.27
TMEM54-205ENST00000475208 GOLGA8HP0CJ92 632 aa29.22■■■□□ 2.27
TMEM54-205ENST00000475208 USH1GQ495M9 461 aa29.22■■■□□ 2.27
TMEM54-205ENST00000475208 GPATCH4Q5T3I0 446 aaKnown RBP29.22■■■□□ 2.27
TMEM54-205ENST00000475208 ESR2Q92731 530 aa29.22■■■□□ 2.27
TMEM54-205ENST00000475208 COPS5Q92905 334 aa29.22■■■□□ 2.27
TMEM54-205ENST00000475208 ZKSCAN3Q9BRR0 538 aa29.22■■■□□ 2.27
TMEM54-205ENST00000475208 CHD7Q9P2D1 2997 aa29.22■■■□□ 2.27
TMEM54-205ENST00000475208 SCN10AQ9Y5Y9 1956 aa29.22■■■□□ 2.27
TMEM54-205ENST00000475208 MFAP1P55081 439 aaKnown RBP29.21■■■□□ 2.27
TMEM54-205ENST00000475208 CCDC85BQ15834 202 aaPredicted RBP29.21■■■□□ 2.27
TMEM54-205ENST00000475208 NBPF20Q3BBV1 942 aa29.21■■■□□ 2.27
TMEM54-205ENST00000475208 PPP1R13LQ8WUF5 828 aa29.21■■■□□ 2.27
TMEM54-205ENST00000475208 CPVLQ9H3G5 476 aa29.21■■■□□ 2.27
TMEM54-205ENST00000475208 THEGQ9P2T0 379 aa29.21■■■□□ 2.27
TMEM54-205ENST00000475208 MYOGP15173 224 aa29.2■■■□□ 2.26
TMEM54-205ENST00000475208 ATP2A2P16615 1042 aaKnown RBP29.2■■■□□ 2.26
TMEM54-205ENST00000475208 TTLL4Q14679 1199 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms