RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 AMNQ9BXJ7 453 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 MAF1Q9H063 256 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 PICK1Q9NRD5 415 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 PNMA2Q9UL42 364 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 PCDHA7Q9UN72 937 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 ZNF536O15090 1300 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 MYPNQ86TC9 1320 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 DOCK1Q14185 1865 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 SPDYE5A6NIY4 337 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 TRIM75PA6NK02 468 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 WNT7AO00755 349 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 CXCL11O14625 94 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 LCE2BO14633 110 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 MEIS2O14770 477 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 ATP2A1O14983 1001 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 VCAM1P19320 739 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 NCLP19338 710 aaKnown RBP7.56□□□□□ -1.2
ATG4A-207ENST00000474825 IREB2P48200 963 aaKnown RBP7.56□□□□□ -1.2
ATG4A-207ENST00000474825 ADCY7P51828 1080 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 FKBP1BP68106 108 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 ATP2C1P98194 919 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-207ENST00000474825 PPATQ06203 517 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 SNW1Q13573 536 aaKnown RBP7.56□□□□□ -1.2
ATG4A-207ENST00000474825 MTMR2Q13614 643 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 GNL2Q13823 731 aaKnown RBP7.56□□□□□ -1.2
ATG4A-207ENST00000474825 STK38Q15208 465 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 ARL6IP4Q66PJ3 421 aaKnown RBP7.56□□□□□ -1.2
ATG4A-207ENST00000474825 DLK2Q6UY11 383 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 RBM43Q6ZSC3 357 aaKnown RBP7.56□□□□□ -1.2
ATG4A-207ENST00000474825 FBXO11Q86XK2 927 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 ANKRD13AQ8IZ07 590 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 SPICE1Q8N0Z3 855 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 SAMD3Q8N6K7 520 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 JMYQ8N9B5 988 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 ANKK1Q8NFD2 765 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 PIBF1Q8WXW3 757 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 MBOAT7Q96N66 472 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 SLC38A10Q9HBR0 1119 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 TMEM63CQ9P1W3 806 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 FBXO2Q9UK22 296 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-207ENST00000474825 PPP1R9AQ9ULJ8 1098 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 NOL7Q9UMY1 257 aaKnown RBP7.56□□□□□ -1.2
ATG4A-207ENST00000474825 CEP131Q9UPN4 1083 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 KCNH4Q9UQ05 1017 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 HPSEQ9Y251 543 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 PCDHB6Q9Y5E3 794 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 PCDHA1Q9Y5I3 950 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 SRPRBQ9Y5M8 271 aaKnown RBP7.56□□□□□ -1.2
ATG4A-207ENST00000474825 ZHX2Q9Y6X8 837 aa7.56□□□□□ -1.2
ATG4A-207ENST00000474825 BAZ2BQ9UIF8 2168 aaKnown RBP7.56□□□□□ -1.2
ATG4A-207ENST00000474825 MYH6P13533 1939 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 TCHHQ07283 1943 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 MYH15Q9Y2K3 1946 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 CYP3A7-CYP3A51PA0A087WV96 503 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 A0A0G2JLL6 359 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-207ENST00000474825 LAD1O00515 517 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 CUTAO60888 179 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 FOSP01100 380 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-207ENST00000474825 LIG1P18858 919 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 CYP3A7P24462 503 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 HOXA7P31268 230 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-207ENST00000474825 NF2P35240 595 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 PRPHP41219 470 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 OAZ1P54368 228 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 HTRA3P83110 453 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 AP3B2Q13367 1082 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 MOGSQ13724 837 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 NONOQ15233 471 aaKnown RBP eCLIP7.55□□□□□ -1.2
ATG4A-207ENST00000474825 EAPPQ56P03 285 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-207ENST00000474825 TTC38Q5R3I4 469 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 PPP4R3AQ6IN85 833 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 MOXD1Q6UVY6 613 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 CATSPERGQ6ZRH7 1159 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 PIK3AP1Q6ZUJ8 805 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 PRRT2Q7Z6L0 340 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-207ENST00000474825 LDHDQ86WU2 507 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 ERO1BQ86YB8 467 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 ELOA2Q8IYF1 753 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-207ENST00000474825 FMR1NBQ8N0W7 255 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-207ENST00000474825 REXO1Q8N1G1 1221 aaKnown RBP7.55□□□□□ -1.2
ATG4A-207ENST00000474825 REPS2Q8NFH8 660 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 CUL5Q93034 780 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 FERMT2Q96AC1 680 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 SLF1Q9BQI6 1058 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 PSTPIP2Q9H939 334 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 DDX19AQ9NUU7 478 aaKnown RBP7.55□□□□□ -1.2
ATG4A-207ENST00000474825 FBXO28Q9NVF7 368 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 MAP3K20Q9NYL2 800 aaKnown RBP7.55□□□□□ -1.2
ATG4A-207ENST00000474825 ISY1Q9ULR0 285 aaKnown RBP7.55□□□□□ -1.2
ATG4A-207ENST00000474825 FZD1Q9UP38 647 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 PHIPQ8WWQ0 1821 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 ATAD5Q96QE3 1844 aa7.55□□□□□ -1.2
ATG4A-207ENST00000474825 POLR2AP24928 1970 aaKnown RBP7.54□□□□□ -1.2
ATG4A-207ENST00000474825 CCDC194A0A1B0GVG4 234 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 FSD2A1L4K1 749 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 USP17L15C9J2P7 530 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 USP17L13C9JLJ4 530 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 USP17L11C9JVI0 530 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 USP17L18D6R9N7 530 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 USP17L22D6RA61 530 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms