RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 DDX25Q9UHL0 483 aaKnown RBP22.41■■□□□ 1.18
SSR1-204ENST00000474597 CTDP1Q9Y5B0 961 aaPredicted RBP22.41■■□□□ 1.18
SSR1-204ENST00000474597 ABCB11O95342 1321 aa22.41■■□□□ 1.18
SSR1-204ENST00000474597 A0A087X0B3 334 aa22.41■■□□□ 1.18
SSR1-204ENST00000474597 GLTPD2A6NH11 291 aa22.41■■□□□ 1.18
SSR1-204ENST00000474597 PPP1R12BO60237 982 aaPredicted RBP22.41■■□□□ 1.18
SSR1-204ENST00000474597 FLOT1O75955 427 aa22.41■■□□□ 1.18
SSR1-204ENST00000474597 SLFN14P0C7P3 912 aa22.41■■□□□ 1.18
SSR1-204ENST00000474597 UBA7P41226 1012 aa22.41■■□□□ 1.18
SSR1-204ENST00000474597 NLRP12P59046 1061 aa22.41■■□□□ 1.18
SSR1-204ENST00000474597 RPAP3Q9H6T3 665 aaPredicted RBP22.41■■□□□ 1.18
SSR1-204ENST00000474597 TUBE1Q9UJT0 475 aa22.41■■□□□ 1.18
SSR1-204ENST00000474597 PHIPQ8WWQ0 1821 aa22.4■■□□□ 1.18
SSR1-204ENST00000474597 C19orf81C9J6K1 198 aa22.4■■□□□ 1.18
SSR1-204ENST00000474597 MARCH6O60337 910 aa22.4■■□□□ 1.18
SSR1-204ENST00000474597 USP2O75604 605 aaPredicted RBP22.4■■□□□ 1.18
SSR1-204ENST00000474597 USP11P51784 963 aa22.4■■□□□ 1.18
SSR1-204ENST00000474597 DGKZQ13574 1117 aa22.4■■□□□ 1.18
SSR1-204ENST00000474597 C11orf57Q6ZUT1 292 aaPredicted RBP22.4■■□□□ 1.18
SSR1-204ENST00000474597 LUZP1Q86V48 1076 aa22.4■■□□□ 1.18
SSR1-204ENST00000474597 LDHDQ86WU2 507 aa22.4■■□□□ 1.18
SSR1-204ENST00000474597 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.4■■□□□ 1.18
SSR1-204ENST00000474597 A0A087WWV3 80 aa22.39■■□□□ 1.17
SSR1-204ENST00000474597 PIK3CDO00329 1044 aa22.39■■□□□ 1.17
SSR1-204ENST00000474597 SLC37A4O43826 429 aa22.39■■□□□ 1.17
SSR1-204ENST00000474597 CFBP00751 764 aa22.39■■□□□ 1.17
SSR1-204ENST00000474597 NF2P35240 595 aa22.39■■□□□ 1.17
SSR1-204ENST00000474597 TECP42680 631 aa22.39■■□□□ 1.17
SSR1-204ENST00000474597 TXKP42681 527 aa22.39■■□□□ 1.17
SSR1-204ENST00000474597 ZC3H15Q8WU90 426 aaKnown RBP22.39■■□□□ 1.17
SSR1-204ENST00000474597 RAB34Q9BZG1 259 aa22.39■■□□□ 1.17
SSR1-204ENST00000474597 CCDC39Q9UFE4 941 aa22.39■■□□□ 1.17
SSR1-204ENST00000474597 CCPG1Q9ULG6 757 aa22.39■■□□□ 1.17
SSR1-204ENST00000474597 GCOM1H8Y6P7 765 aaPredicted RBP22.38■■□□□ 1.17
SSR1-204ENST00000474597 FOXN1O15353 648 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 ICAM1P05362 532 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 POLR2MP0CAP2 368 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 CDC25AP30304 524 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 HOXA13P31271 388 aaPredicted RBP22.38■■□□□ 1.17
SSR1-204ENST00000474597 MAP3K9P80192 1104 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 PLCB2Q00722 1185 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 MDM2Q00987 491 aaPredicted RBP22.38■■□□□ 1.17
SSR1-204ENST00000474597 SMARCE1Q969G3 411 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 MTMR9Q96QG7 549 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 CCSER1Q9C0I3 900 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 PCDHA5Q9Y5H7 936 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 SCN4AP35499 1836 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 GOLGA6L19H0YKK7 550 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 OPLAHO14841 1288 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 EDIL3O43854 480 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 STAT6P42226 847 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 ARHGAP4P98171 946 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 TMOD4Q9NZQ9 345 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 PPP1R9AQ9ULJ8 1098 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 CSADQ9Y600 493 aa22.38■■□□□ 1.17
SSR1-204ENST00000474597 IQCA1LA6NCM1 817 aa22.37■■□□□ 1.17
SSR1-204ENST00000474597 BECN2A8MW95 431 aa22.37■■□□□ 1.17
SSR1-204ENST00000474597 SMC2O95347 1197 aa22.37■■□□□ 1.17
SSR1-204ENST00000474597 AFMP43652 599 aa22.37■■□□□ 1.17
SSR1-204ENST00000474597 HMGCS2P54868 508 aa22.37■■□□□ 1.17
SSR1-204ENST00000474597 ISM2Q6H9L7 571 aa22.37■■□□□ 1.17
SSR1-204ENST00000474597 MOXD1Q6UVY6 613 aa22.37■■□□□ 1.17
SSR1-204ENST00000474597 FCHSD1Q86WN1 690 aa22.37■■□□□ 1.17
SSR1-204ENST00000474597 GRAMD1CQ8IYS0 662 aa22.37■■□□□ 1.17
SSR1-204ENST00000474597 EHMT1Q9H9B1 1298 aa22.37■■□□□ 1.17
SSR1-204ENST00000474597 DISC1Q9NRI5 854 aa22.37■■□□□ 1.17
SSR1-204ENST00000474597 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.37■■□□□ 1.17
SSR1-204ENST00000474597 ZBED4O75132 1171 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 PRR29P0C7W0 189 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 IREB2P48200 963 aaKnown RBP22.36■■□□□ 1.17
SSR1-204ENST00000474597 KARSQ15046 597 aaKnown RBP22.36■■□□□ 1.17
SSR1-204ENST00000474597 DPCR1Q3MIW9 517 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 EAPPQ56P03 285 aaPredicted RBP22.36■■□□□ 1.17
SSR1-204ENST00000474597 RRAGBQ5VZM2 374 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 DLK2Q6UY11 383 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 CABP7Q86V35 215 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 PAGE5Q96GU1 130 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 C12orf42Q96LP6 360 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 PPP1R9BQ96SB3 815 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 PNMA2Q9UL42 364 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 PP2D1A8MPX8 630 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 FDX1P10109 184 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 SREBF1P36956 1147 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 FXR2P51116 673 aaKnown RBP eCLIP22.36■■□□□ 1.171e-6■■■□□ 18.3
SSR1-204ENST00000474597 E2F4Q16254 413 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 CPXCR1Q8N123 301 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 AGBL1Q96MI9 1066 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 SLC38A10Q9HBR0 1119 aa22.36■■□□□ 1.17
SSR1-204ENST00000474597 VGLL4Q14135 290 aa22.35■■□□□ 1.17
SSR1-204ENST00000474597 AFG3L2Q9Y4W6 797 aa22.35■■□□□ 1.17
SSR1-204ENST00000474597 PARP14Q460N5 1801 aa22.34■■□□□ 1.17
SSR1-204ENST00000474597 CYP3A7-CYP3A51PA0A087WV96 503 aa22.34■■□□□ 1.17
SSR1-204ENST00000474597 CYP3A7P24462 503 aa22.34■■□□□ 1.17
SSR1-204ENST00000474597 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.34■■□□□ 1.17
SSR1-204ENST00000474597 SH3RF1Q7Z6J0 888 aa22.34■■□□□ 1.17
SSR1-204ENST00000474597 IGSF22Q8N9C0 903 aa22.34■■□□□ 1.17
SSR1-204ENST00000474597 P2RX7Q99572 595 aaKnown RBP22.34■■□□□ 1.17
SSR1-204ENST00000474597 TTC12Q9H892 705 aaPredicted RBP22.34■■□□□ 1.17
SSR1-204ENST00000474597 ZNF536O15090 1300 aa22.34■■□□□ 1.17
SSR1-204ENST00000474597 ZNF76P36508 570 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms