RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CSGALNACT2Q8N6G5 542 aa20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 TTLL11Q8NHH1 800 aa20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 OSBPL7Q9BZF2 842 aa20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 SALL4Q9UJQ4 1053 aa20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 GOLGA6L7A0A1B0GV03 622 aa20.64■□□□□ 0.89
ECHDC1-214ENST00000474289 A0A1W2PQJ5 194 aa20.64■□□□□ 0.89
ECHDC1-214ENST00000474289 PLEKHA8P1O95397 391 aa20.64■□□□□ 0.89
ECHDC1-214ENST00000474289 SSBP05455 408 aaKnown RBP eCLIP20.64■□□□□ 0.89
ECHDC1-214ENST00000474289 C1orf131Q8NDD1 294 aaKnown RBP20.64■□□□□ 0.89
ECHDC1-214ENST00000474289 DUSP9Q99956 384 aaKnown RBP20.64■□□□□ 0.89
ECHDC1-214ENST00000474289 MTA3Q9BTC8 594 aa20.64■□□□□ 0.89
ECHDC1-214ENST00000474289 PRPF3O43395 683 aaKnown RBP20.64■□□□□ 0.89
ECHDC1-214ENST00000474289 CLSTN1O94985 981 aa20.64■□□□□ 0.89
ECHDC1-214ENST00000474289 CSF1RP07333 972 aa20.64■□□□□ 0.89
ECHDC1-214ENST00000474289 HPDP32754 393 aaPredicted RBP20.64■□□□□ 0.89
ECHDC1-214ENST00000474289 CARD10Q9BWT7 1032 aa20.64■□□□□ 0.89
ECHDC1-214ENST00000474289 PLAGL2Q9UPG8 496 aa20.64■□□□□ 0.89
ECHDC1-214ENST00000474289 KCPQ6ZWJ8 1503 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 TNKSO95271 1327 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 DNM1LO00429 736 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 PCCAP05165 728 aaPredicted RBP20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 ARID4AP29374 1257 aaPredicted RBP20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 SEC23AQ15436 765 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 FIGNQ5HY92 759 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 MIIPQ5JXC2 388 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 PPP4R3AQ6IN85 833 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 C2CD5Q86YS7 1000 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 SGSM3Q96HU1 749 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 CNOT6LQ96LI5 555 aaKnown RBP20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 NKRFO15226 690 aaKnown RBP eCLIP20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 KLRC4O43908 158 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 PPP2R5AQ15172 486 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 NAALADL2Q58DX5 795 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 PIK3AP1Q6ZUJ8 805 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 TEX11Q8IYF3 940 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 VGLL2Q8N8G2 317 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 HAUS2Q9NVX0 235 aa20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 TPX2Q9ULW0 747 aaKnown RBP20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 BAZ2BQ9UIF8 2168 aaKnown RBP20.63■□□□□ 0.89
ECHDC1-214ENST00000474289 ECM2O94769 699 aaPredicted RBP20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 PAX7P23759 505 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 HNRNPH3P31942 346 aaKnown RBP20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 KCNB1Q14721 858 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 CFAP221Q4G0U5 840 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 PROSER2Q86WR7 435 aaPredicted RBP20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 ANKRD13CQ8N6S4 541 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 GIMAP8Q8ND71 665 aaPredicted RBP20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 NOC3LQ8WTT2 800 aaKnown RBP20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 SCLT1Q96NL6 688 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 ERGIC2Q96RQ1 377 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 GREM2Q9H772 168 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 LCA5LO95447 670 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 EIF4A3P38919 411 aaKnown RBP20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 PPARDQ03181 441 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 PPP2R5BQ15173 497 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 ANKRD20A8PQ5CZ79 823 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 MAATS1Q7Z4T9 603 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 CASKIN2Q8WXE0 1202 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 NOC4LQ9BVI4 516 aaKnown RBP20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 DISC1Q9NRI5 854 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 PLAAQ9Y263 795 aa20.62■□□□□ 0.89
ECHDC1-214ENST00000474289 RTL9Q8NET4 1388 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 CRYMQ14894 314 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 TRADDQ15628 312 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 KLHDC7AQ5VTJ3 777 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 LCORLQ8N3X6 602 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 MAGEC3Q8TD91 643 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 MTMR8Q96EF0 704 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 CNNM1Q9NRU3 951 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 ADAMTSL3P82987 1691 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 UBR2Q8IWV8 1755 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 RHOBTB3O94955 611 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 EZRP15311 586 aaKnown RBP20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 ITGA6P23229 1130 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 MTIF2P46199 727 aaKnown RBP20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 QPCTQ16769 361 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 GPIHBP1Q8IV16 184 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 CCDC50Q8IVM0 306 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 PLA2G12BQ9BX93 195 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 NACAP1Q9BZK3 213 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 TMBIM4Q9HC24 238 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 SLC4A4Q9Y6R1 1079 aa20.61■□□□□ 0.89
ECHDC1-214ENST00000474289 EPHB6O15197 1021 aa20.6■□□□□ 0.89
ECHDC1-214ENST00000474289 AKR1B10O60218 316 aa20.6■□□□□ 0.89
ECHDC1-214ENST00000474289 LONP1P36776 959 aaKnown RBP20.6■□□□□ 0.89
ECHDC1-214ENST00000474289 E2F5Q15329 346 aa20.6■□□□□ 0.89
ECHDC1-214ENST00000474289 ZSCAN29Q8IWY8 852 aaPredicted RBP20.6■□□□□ 0.89
ECHDC1-214ENST00000474289 CCDC155Q8N6L0 562 aa20.6■□□□□ 0.89
ECHDC1-214ENST00000474289 WHAMMQ8TF30 809 aa20.6■□□□□ 0.89
ECHDC1-214ENST00000474289 GMNCA6NCL1 334 aa20.59■□□□□ 0.89
ECHDC1-214ENST00000474289 MAP3K12Q12852 859 aa20.59■□□□□ 0.89
ECHDC1-214ENST00000474289 RNF41Q9H4P4 317 aaPredicted RBP20.59■□□□□ 0.89
ECHDC1-214ENST00000474289 SLC12A6Q9UHW9 1150 aa20.59■□□□□ 0.89
ECHDC1-214ENST00000474289 ADAMTS3O15072 1205 aa20.59■□□□□ 0.89
ECHDC1-214ENST00000474289 BUB1O43683 1085 aa20.59■□□□□ 0.89
ECHDC1-214ENST00000474289 TRAPPC10P48553 1259 aa20.59■□□□□ 0.89
ECHDC1-214ENST00000474289 ARFGAP2Q8N6H7 521 aa20.59■□□□□ 0.89
ECHDC1-214ENST00000474289 ENAHQ8N8S7 591 aaPredicted RBP20.59■□□□□ 0.89
ECHDC1-214ENST00000474289 ANKRD18BA2A2Z9 1011 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms