RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 OAZ1P54368 228 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 CCL23P55773 120 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 CNTN2Q02246 1040 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 TNFAIP2Q03169 654 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 ITGA7Q13683 1181 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 FSCN1Q16658 493 aaKnown RBP6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 SBK1Q52WX2 424 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 TLK2Q86UE8 772 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 SIRT2Q8IXJ6 389 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 MICALL1Q8N3F8 863 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 FAM133AQ8N9E0 248 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 CHST13Q8NET6 341 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 PANK1Q8TE04 598 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 KIFC2Q96AC6 838 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 HAUS7Q99871 368 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 PUS7LQ9H0K6 701 aaKnown RBP6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 TRPV6Q9H1D0 765 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 KCNH6Q9H252 994 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 BOLA2Q9H3K6 86 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 FBXO40Q9UH90 709 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 GNEQ9Y223 722 aaKnown RBP6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 PCDHA11Q9Y5I1 949 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 SLC4A7Q9Y6M7 1214 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 MYH7P12883 1935 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 TCF20Q9UGU0 1960 aaKnown RBP6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 SOWAHBA6NEL2 793 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 CCER2I3L3R5 266 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 ERC2O15083 957 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 GTPBP6O43824 516 aaPredicted RBP6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 GPR37L1O60883 481 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 ATP2A2P16615 1042 aaKnown RBP6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 POU3F3P20264 500 aaPredicted RBP6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 FOXK2Q01167 660 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 TTLL4Q14679 1199 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 NOL8Q76FK4 1167 aaKnown RBP6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 STK11IPQ8N1F8 1099 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 LRRC47Q8N1G4 583 aaKnown RBP6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 GMCL1P1Q8NEA9 526 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 MKL1Q969V6 931 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 CEP95Q96GE4 821 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 SCLYQ96I15 445 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 AGBL1Q96MI9 1066 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 STRBPQ96SI9 672 aaKnown RBP6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 BCL11AQ9H165 835 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 ACAD9Q9H845 621 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 MKNK2Q9HBH9 465 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 EPB41L4AQ9HCS5 686 aaPredicted RBP6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 A1CFQ9NQ94 594 aaKnown RBP6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 TSHZ2Q9NRE2 1034 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 HOMER2Q9NSB8 354 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 MTMR4Q9NYA4 1195 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 CLIP2Q9UDT6 1046 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 FEM1BQ9UK73 627 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 SYNPO2Q9UMS6 1093 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 CTDP1Q9Y5B0 961 aaPredicted RBP6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 MTCH2Q9Y6C9 303 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 DDX49Q9Y6V7 483 aaKnown RBP6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 PLIN4Q96Q06 1357 aa6.13□□□□□ -1.43
SNRNP40-204ENST00000474025 EPOPA6NHQ4 379 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 ASB14A6NK59 587 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 ZBBXA8MT70 800 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 GSG1L2A8MUP6 293 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 RFXAPO00287 272 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 ZNF536O15090 1300 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 DYNC1LI2O43237 492 aaPredicted RBP6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 RAB11FIP3O75154 756 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 HMMRO75330 724 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 ARHGEF15O94989 841 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 TTLL1O95922 423 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 CA3P07451 260 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 PFKMP08237 780 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 FDX1P10109 184 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 BMP3P12645 472 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 SMPD1P17405 629 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 PDE4AP27815 886 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 STAT2P52630 851 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 PSMC6P62333 389 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 SKIV2LQ15477 1246 aaKnown RBP6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 TMEM63BQ5T3F8 832 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 ZSCAN25Q6NSZ9 544 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 TAPT1Q6NXT6 567 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 GIMAP6Q6P9H5 292 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 FBXO16Q8IX29 292 aaPredicted RBP6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 RPAP2Q8IXW5 612 aaPredicted RBP6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 RPUSD2Q8IZ73 545 aaKnown RBP6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 OXER1Q8TDS5 423 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 LRFN3Q9BTN0 628 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 SEZ6LQ9BYH1 1024 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 AP5M1Q9H0R1 490 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 ALDH8A1Q9H2A2 487 aaPredicted RBP6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 EPHX3Q9H6B9 360 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 PDGFCQ9NRA1 345 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 RNF146Q9NTX7 359 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 COG6Q9Y2V7 657 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 MYH4Q9Y623 1939 aa6.12□□□□□ -1.43
SNRNP40-204ENST00000474025 TNKSO95271 1327 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 MINDY4BA8MYZ0 360 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 TMEM232C9JQI7 657 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 TLL1O43897 1013 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 ZEB2O60315 1214 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms