RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 ACRP10323 421 aa14□□□□□ -0.17
SMPD4-217ENST00000473720 CDK7P50613 346 aa14□□□□□ -0.17
SMPD4-217ENST00000473720 PSMC6P62333 389 aa14□□□□□ -0.17
SMPD4-217ENST00000473720 ITGA7Q13683 1181 aa14□□□□□ -0.17
SMPD4-217ENST00000473720 FAM126BQ8IXS8 530 aa14□□□□□ -0.17
SMPD4-217ENST00000473720 CLEC4DQ8WXI8 215 aa14□□□□□ -0.17
SMPD4-217ENST00000473720 DSCC1Q9BVC3 393 aa14□□□□□ -0.17
SMPD4-217ENST00000473720 WDR11Q9BZH6 1224 aa14□□□□□ -0.17
SMPD4-217ENST00000473720 VAT1LQ9HCJ6 419 aa14□□□□□ -0.17
SMPD4-217ENST00000473720 VTA1Q9NP79 307 aa14□□□□□ -0.17
SMPD4-217ENST00000473720 ZSWIM5Q9P217 1185 aa14□□□□□ -0.17
SMPD4-217ENST00000473720 SCN10AQ9Y5Y9 1956 aa14□□□□□ -0.17
SMPD4-217ENST00000473720 TNKSO95271 1327 aa13.99□□□□□ -0.17
SMPD4-217ENST00000473720 CSF2RAP15509 400 aa13.99□□□□□ -0.17
SMPD4-217ENST00000473720 PDE4AP27815 886 aa13.99□□□□□ -0.17
SMPD4-217ENST00000473720 CYP2C18P33260 490 aa13.99□□□□□ -0.17
SMPD4-217ENST00000473720 RPS6P62753 249 aaKnown RBP13.99□□□□□ -0.17
SMPD4-217ENST00000473720 PDE4DQ08499 809 aa13.99□□□□□ -0.17
SMPD4-217ENST00000473720 GPATCH4Q5T3I0 446 aaKnown RBP13.99□□□□□ -0.17
SMPD4-217ENST00000473720 FAM109BQ6ICB4 259 aaPredicted RBP13.99□□□□□ -0.17
SMPD4-217ENST00000473720 DGKHQ86XP1 1220 aa13.99□□□□□ -0.17
SMPD4-217ENST00000473720 OR6J1Q8NGC5 347 aa13.99□□□□□ -0.17
SMPD4-217ENST00000473720 ZSCAN10Q96SZ4 725 aaPredicted RBP13.99□□□□□ -0.17
SMPD4-217ENST00000473720 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.99□□□□□ -0.177e-7■■■■□ 19.3
SMPD4-217ENST00000473720 IL25Q9H293 177 aa13.99□□□□□ -0.17
SMPD4-217ENST00000473720 CTNNA3Q9UI47 895 aa13.99□□□□□ -0.17
SMPD4-217ENST00000473720 TBX21Q9UL17 535 aa13.99□□□□□ -0.17
SMPD4-217ENST00000473720 TANC1Q9C0D5 1861 aa13.98□□□□□ -0.17
SMPD4-217ENST00000473720 DLL1O00548 723 aa13.98□□□□□ -0.17
SMPD4-217ENST00000473720 MYL3P08590 195 aa13.98□□□□□ -0.17
SMPD4-217ENST00000473720 SNHG28P0DPA3 235 aa13.98□□□□□ -0.17
SMPD4-217ENST00000473720 CHMP4BP1P59074 171 aa13.98□□□□□ -0.17
SMPD4-217ENST00000473720 SMAD3P84022 425 aaKnown RBP13.98□□□□□ -0.17
SMPD4-217ENST00000473720 PPIGQ13427 754 aaKnown RBP eCLIP13.98□□□□□ -0.171e-6■■■□□ 16.1
SMPD4-217ENST00000473720 CDC37Q16543 378 aaPredicted RBP13.98□□□□□ -0.17
SMPD4-217ENST00000473720 CCDC178Q5BJE1 867 aa13.98□□□□□ -0.17
SMPD4-217ENST00000473720 MFSD5Q6N075 450 aa13.98□□□□□ -0.17
SMPD4-217ENST00000473720 ADGRF4Q8IZF3 695 aa13.98□□□□□ -0.17
SMPD4-217ENST00000473720 TMEM199Q8N511 208 aa13.98□□□□□ -0.17
SMPD4-217ENST00000473720 ENAHQ8N8S7 591 aaPredicted RBP13.98□□□□□ -0.17
SMPD4-217ENST00000473720 PPP1R13LQ8WUF5 828 aa13.98□□□□□ -0.17
SMPD4-217ENST00000473720 MPHOSPH6Q99547 160 aaKnown RBP13.98□□□□□ -0.17
SMPD4-217ENST00000473720 UBAC1Q9BSL1 405 aa13.98□□□□□ -0.17
SMPD4-217ENST00000473720 KRT23Q9C075 422 aa13.98□□□□□ -0.17
SMPD4-217ENST00000473720 SEMA6BQ9H3T3 888 aa13.98□□□□□ -0.17
SMPD4-217ENST00000473720 UMODL1Q5DID0 1318 aa13.97□□□□□ -0.17
SMPD4-217ENST00000473720 KAT6AQ92794 2004 aa13.97□□□□□ -0.17
SMPD4-217ENST00000473720 B4GALT4O60513 344 aa13.97□□□□□ -0.17
SMPD4-217ENST00000473720 CABYRO75952 493 aa13.97□□□□□ -0.17
SMPD4-217ENST00000473720 PARP1P09874 1014 aaKnown RBP13.97□□□□□ -0.17
SMPD4-217ENST00000473720 GSPT1P15170 499 aaKnown RBP13.97□□□□□ -0.17
SMPD4-217ENST00000473720 CCL23P55773 120 aa13.97□□□□□ -0.17
SMPD4-217ENST00000473720 DUSP28Q4G0W2 176 aa13.97□□□□□ -0.17
SMPD4-217ENST00000473720 TTC22Q5TAA0 569 aa13.97□□□□□ -0.17
SMPD4-217ENST00000473720 MORC4Q8TE76 937 aa13.97□□□□□ -0.17
SMPD4-217ENST00000473720 MYLIPQ8WY64 445 aa13.97□□□□□ -0.17
SMPD4-217ENST00000473720 TBC1D5Q92609 795 aa13.97□□□□□ -0.17
SMPD4-217ENST00000473720 COPS5Q92905 334 aa13.97□□□□□ -0.17
SMPD4-217ENST00000473720 CDX2Q99626 313 aaPredicted RBP13.97□□□□□ -0.17
SMPD4-217ENST00000473720 TRPV6Q9H1D0 765 aa13.97□□□□□ -0.17
SMPD4-217ENST00000473720 HIPK3Q9H422 1215 aa13.97□□□□□ -0.17
SMPD4-217ENST00000473720 GPHNQ9NQX3 736 aaPredicted RBP13.97□□□□□ -0.17
SMPD4-217ENST00000473720 GRIN2DO15399 1336 aa13.96□□□□□ -0.17
SMPD4-217ENST00000473720 WDR19Q8NEZ3 1342 aa13.96□□□□□ -0.17
SMPD4-217ENST00000473720 CD4P01730 458 aa13.96□□□□□ -0.17
SMPD4-217ENST00000473720 NKX3-2P78367 333 aa13.96□□□□□ -0.17
SMPD4-217ENST00000473720 PPP2R5BQ15173 497 aa13.96□□□□□ -0.17
SMPD4-217ENST00000473720 QRICH1Q2TAL8 776 aa13.96□□□□□ -0.17
SMPD4-217ENST00000473720 ASPRV1Q53RT3 343 aa13.96□□□□□ -0.17
SMPD4-217ENST00000473720 FAM47CQ5HY64 1035 aa13.96□□□□□ -0.17
SMPD4-217ENST00000473720 TMEM240Q5SV17 173 aa13.96□□□□□ -0.17
SMPD4-217ENST00000473720 IFIT1BQ5T764 474 aaKnown RBP13.96□□□□□ -0.17
SMPD4-217ENST00000473720 ZNF365Q70YC5 407 aa13.96□□□□□ -0.17
SMPD4-217ENST00000473720 TTYH1Q9H313 450 aaPredicted RBP13.96□□□□□ -0.17
SMPD4-217ENST00000473720 CNNM2Q9H8M5 875 aa13.96□□□□□ -0.17
SMPD4-217ENST00000473720 PNMA2Q9UL42 364 aa13.96□□□□□ -0.17
SMPD4-217ENST00000473720 Q9Y3F1 56 aa13.96□□□□□ -0.17
SMPD4-217ENST00000473720 TET1Q8NFU7 2136 aa13.96□□□□□ -0.18
SMPD4-217ENST00000473720 ABCB11O95342 1321 aa13.95□□□□□ -0.18
SMPD4-217ENST00000473720 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.95□□□□□ -0.18
SMPD4-217ENST00000473720 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.95□□□□□ -0.18
SMPD4-217ENST00000473720 GRXCR1A8MXD5 290 aa13.95□□□□□ -0.18
SMPD4-217ENST00000473720 B4DLN1 442 aa13.95□□□□□ -0.18
SMPD4-217ENST00000473720 TXNP10599 105 aaKnown RBP13.95□□□□□ -0.18
SMPD4-217ENST00000473720 DNAJB2P25686 324 aa13.95□□□□□ -0.18
SMPD4-217ENST00000473720 CPT1AP50416 773 aa13.95□□□□□ -0.18
SMPD4-217ENST00000473720 MRPL12P52815 198 aaKnown RBP13.95□□□□□ -0.18
SMPD4-217ENST00000473720 SEPT14Q6ZU15 432 aa13.95□□□□□ -0.18
SMPD4-217ENST00000473720 CYB5R4Q7L1T6 521 aa13.95□□□□□ -0.18
SMPD4-217ENST00000473720 FBXO11Q86XK2 927 aa13.95□□□□□ -0.18
SMPD4-217ENST00000473720 STAG2Q8N3U4 1231 aa13.95□□□□□ -0.18
SMPD4-217ENST00000473720 DNERQ8NFT8 737 aa13.95□□□□□ -0.18
SMPD4-217ENST00000473720 TAAR1Q96RJ0 339 aa13.95□□□□□ -0.18
SMPD4-217ENST00000473720 POLR3EQ9NVU0 708 aa13.95□□□□□ -0.18
SMPD4-217ENST00000473720 RAD50Q92878 1312 aa13.94□□□□□ -0.18
SMPD4-217ENST00000473720 PTPRSQ13332 1948 aa13.94□□□□□ -0.18
SMPD4-217ENST00000473720 CFBP00751 764 aa13.94□□□□□ -0.18
SMPD4-217ENST00000473720 PTH1RQ03431 593 aa13.94□□□□□ -0.18
SMPD4-217ENST00000473720 TRDNQ13061 729 aa13.94□□□□□ -0.18
SMPD4-217ENST00000473720 C16orf59Q7L2K0 433 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms