RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 CDC45O75419 566 aa15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 ALAS1P13196 640 aa15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 PBX2P40425 430 aa15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 CCDC174Q6PII3 467 aa15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 CYB5R4Q7L1T6 521 aa15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 C16orf59Q7L2K0 433 aa15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 SKAP1Q86WV1 359 aa15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 KLHDC9Q8NEP7 349 aa15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 TRERF1Q96PN7 1200 aa15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 MTA3Q9BTC8 594 aa15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 A1CFQ9NQ94 594 aaKnown RBP15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 TBX21Q9UL17 535 aa15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 FAM184BQ9ULE4 1060 aa15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 MOXD2PA6NHM9 499 aa15.13■□□□□ 0.01
SHROOM3-204ENST00000473602 SNAI1O95863 264 aaPredicted RBP15.13■□□□□ 0.01
SHROOM3-204ENST00000473602 PARP1P09874 1014 aaKnown RBP15.13■□□□□ 0.01
SHROOM3-204ENST00000473602 KCNA4P22459 653 aa15.13■□□□□ 0.01
SHROOM3-204ENST00000473602 IRX5P78411 483 aaPredicted RBP15.13■□□□□ 0.01
SHROOM3-204ENST00000473602 TMEM240Q5SV17 173 aa15.13■□□□□ 0.01
SHROOM3-204ENST00000473602 CCSAPQ6IQ19 270 aaPredicted RBP15.13■□□□□ 0.01
SHROOM3-204ENST00000473602 MFSD5Q6N075 450 aa15.13■□□□□ 0.01
SHROOM3-204ENST00000473602 GAS2L1Q99501 681 aaPredicted RBP15.13■□□□□ 0.01
SHROOM3-204ENST00000473602 ANO2Q9NQ90 1003 aa15.13■□□□□ 0.01
SHROOM3-204ENST00000473602 RAPGEFL1Q9UHV5 662 aa15.13■□□□□ 0.01
SHROOM3-204ENST00000473602 LCTP09848 1927 aa15.13■□□□□ 0.01
SHROOM3-204ENST00000473602 SYNRGQ9UMZ2 1314 aa15.13■□□□□ 0.01
SHROOM3-204ENST00000473602 MYADML2A6NDP7 307 aa15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 SNAP25P60880 206 aa15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 PPIGQ13427 754 aaKnown RBP eCLIP15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 STOX1Q6ZVD7 989 aa15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 MB21D2Q8IYB1 491 aaPredicted RBP15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 FAM133AQ8N9E0 248 aa15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 ATXN2LQ8WWM7 1075 aaKnown RBP15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 VTI1AQ96AJ9 217 aa15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 GLT1D1Q96MS3 346 aa15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 PBX4Q9BYU1 374 aa15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 MAF1Q9H063 256 aa15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 PRDM12Q9H4Q4 367 aa15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 ZHX1Q9UKY1 873 aaPredicted RBP15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 LRRC37A2A6NM11 1700 aa15.12■□□□□ 0.01
SHROOM3-204ENST00000473602 IFIT3O14879 490 aaKnown RBP15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 DUSP11O75319 330 aaKnown RBP15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 GOLGA8HP0CJ92 632 aa15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 ACRP10323 421 aa15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 CSF2RAP15509 400 aa15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 CDK7P50613 346 aa15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 WTAPQ15007 396 aa15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 NECTIN1Q15223 517 aa15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 MUM1L1Q5H9M0 696 aa15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 RASIP1Q5U651 963 aa15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 RNF20Q5VTR2 975 aa15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 ASB2Q96Q27 587 aa15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 TAF6LQ9Y6J9 622 aa15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 ELP1O95163 1332 aa15.11■□□□□ 0.01
SHROOM3-204ENST00000473602 CHD9Q3L8U1 2897 aa15.1■□□□□ 0.01
SHROOM3-204ENST00000473602 LOC102724159A0A0B4J2E5 919 aa15.1■□□□□ 0.01
SHROOM3-204ENST00000473602 SLC27A2O14975 620 aa15.1■□□□□ 0.01
SHROOM3-204ENST00000473602 PWP2Q15269 919 aaKnown RBP15.1■□□□□ 0.01
SHROOM3-204ENST00000473602 CCDC85BQ15834 202 aaPredicted RBP15.1■□□□□ 0.01
SHROOM3-204ENST00000473602 CREB3L3Q68CJ9 461 aa15.1■□□□□ 0.01
SHROOM3-204ENST00000473602 ZNF365Q70YC5 407 aa15.1■□□□□ 0.01
SHROOM3-204ENST00000473602 FGD4Q96M96 766 aa15.1■□□□□ 0.01
SHROOM3-204ENST00000473602 ABHD16BQ9H3Z7 469 aa15.1■□□□□ 0.01
SHROOM3-204ENST00000473602 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.1■□□□□ 0.01
SHROOM3-204ENST00000473602 PPP4R2Q9NY27 417 aa15.1■□□□□ 0.01
SHROOM3-204ENST00000473602 CYP39A1Q9NYL5 469 aa15.1■□□□□ 0.01
SHROOM3-204ENST00000473602 MROH7Q68CQ1 1323 aa15.1■□□□□ 0.01
SHROOM3-204ENST00000473602 ASB14A6NK59 587 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 ASGR1P07306 291 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 C6orf222P0C671 652 aaPredicted RBP15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 CST5P28325 142 aaPredicted RBP15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 MCM5P33992 734 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 ANTXR2P58335 489 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 CNTN2Q02246 1040 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 ACVR2BQ13705 512 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 ADGRE1Q14246 886 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 CDC37Q16543 378 aaPredicted RBP15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 TMEM67Q5HYA8 995 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 NSMFQ6X4W1 530 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 ARMCX2Q7L311 632 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 ADGRF4Q8IZF3 695 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 TMEM199Q8N511 208 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 PCSK9Q8NBP7 692 aaKnown RBP15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 TMEM87BQ96K49 555 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 UBA5Q9GZZ9 404 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 THEGQ9P2T0 379 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 MYO9BQ13459 2157 aa15.09■□□□□ 0.01
SHROOM3-204ENST00000473602 PALM3A6NDB9 673 aaPredicted RBP15.08■□□□□ 0
SHROOM3-204ENST00000473602 SOWAHBA6NEL2 793 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 KLRF2D3W0D1 207 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 ARVCFO00192 962 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 NFIBO00712 420 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 ADCY6O43306 1168 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 IGFBP4P22692 258 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 MRPS5P82675 430 aaKnown RBP15.08■□□□□ 0
SHROOM3-204ENST00000473602 GRM4Q14833 912 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 GNASQ5JWF2 1037 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 CCDC144CPQ8IYA2 1237 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 TMTC2Q8N394 836 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 IGDCC4Q8TDY8 1250 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms