RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 PCSK9Q8NBP7 692 aaKnown RBP21.05■□□□□ 0.96
SNX4-204ENST00000473417 IGDCC4Q8TDY8 1250 aa21.05■□□□□ 0.96
SNX4-204ENST00000473417 MORC4Q8TE76 937 aa21.05■□□□□ 0.96
SNX4-204ENST00000473417 TRIM43Q96BQ3 446 aaPredicted RBP21.05■□□□□ 0.96
SNX4-204ENST00000473417 SPC25Q9HBM1 224 aa21.05■□□□□ 0.96
SNX4-204ENST00000473417 GPHNQ9NQX3 736 aaPredicted RBP21.05■□□□□ 0.96
SNX4-204ENST00000473417 PNMA2Q9UL42 364 aa21.05■□□□□ 0.96
SNX4-204ENST00000473417 DDX49Q9Y6V7 483 aaKnown RBP21.05■□□□□ 0.96
SNX4-204ENST00000473417 KIAA1217Q5T5P2 1943 aa21.05■□□□□ 0.96
SNX4-204ENST00000473417 PQBP1O60828 265 aaKnown RBP21.04■□□□□ 0.96
SNX4-204ENST00000473417 ASGR1P07306 291 aa21.04■□□□□ 0.96
SNX4-204ENST00000473417 TNFAIP2Q03169 654 aa21.04■□□□□ 0.96
SNX4-204ENST00000473417 CLEC4DQ8WXI8 215 aa21.04■□□□□ 0.96
SNX4-204ENST00000473417 BADQ92934 168 aa21.04■□□□□ 0.96
SNX4-204ENST00000473417 KCNB2Q92953 911 aa21.04■□□□□ 0.96
SNX4-204ENST00000473417 PURBQ96QR8 312 aaKnown RBP21.04■□□□□ 0.96
SNX4-204ENST00000473417 USP26Q9BXU7 913 aa21.04■□□□□ 0.96
SNX4-204ENST00000473417 ELP1O95163 1332 aa21.04■□□□□ 0.96
SNX4-204ENST00000473417 BAATQ14032 418 aaPredicted RBP21.03■□□□□ 0.96
SNX4-204ENST00000473417 KRT32Q14532 448 aa21.03■□□□□ 0.96
SNX4-204ENST00000473417 DEFB123Q8N688 67 aa21.03■□□□□ 0.96
SNX4-204ENST00000473417 GLT1D1Q96MS3 346 aa21.03■□□□□ 0.96
SNX4-204ENST00000473417 TOX2Q96NM4 488 aa21.03■□□□□ 0.96
SNX4-204ENST00000473417 LRRC2Q9BYS8 371 aa21.03■□□□□ 0.96
SNX4-204ENST00000473417 ADD3Q9UEY8 706 aaKnown RBP21.03■□□□□ 0.96
SNX4-204ENST00000473417 GNEQ9Y223 722 aaKnown RBP21.03■□□□□ 0.96
SNX4-204ENST00000473417 SNX14Q9Y5W7 946 aa21.03■□□□□ 0.96
SNX4-204ENST00000473417 LOC102724159A0A0B4J2E5 919 aa21.02■□□□□ 0.96
SNX4-204ENST00000473417 KIAA0355O15063 1070 aa21.02■□□□□ 0.96
SNX4-204ENST00000473417 EPB41L2O43491 1005 aaKnown RBP21.02■□□□□ 0.96
SNX4-204ENST00000473417 ALDH5A1P51649 535 aaPredicted RBP21.02■□□□□ 0.96
SNX4-204ENST00000473417 PWP2Q15269 919 aaKnown RBP21.02■□□□□ 0.96
SNX4-204ENST00000473417 GNASQ5JWF2 1037 aa21.02■□□□□ 0.96
SNX4-204ENST00000473417 TAPT1Q6NXT6 567 aa21.02■□□□□ 0.96
SNX4-204ENST00000473417 SLC30A10Q6XR72 485 aa21.02■□□□□ 0.96
SNX4-204ENST00000473417 TLK2Q86UE8 772 aa21.02■□□□□ 0.96
SNX4-204ENST00000473417 FBXO16Q8IX29 292 aaPredicted RBP21.02■□□□□ 0.96
SNX4-204ENST00000473417 TMEM87BQ96K49 555 aa21.02■□□□□ 0.96
SNX4-204ENST00000473417 UBA5Q9GZZ9 404 aa21.02■□□□□ 0.96
SNX4-204ENST00000473417 VTA1Q9NP79 307 aa21.02■□□□□ 0.96
SNX4-204ENST00000473417 PARP1P09874 1014 aaKnown RBP21.01■□□□□ 0.95
SNX4-204ENST00000473417 ITGB8P26012 769 aa21.01■□□□□ 0.95
SNX4-204ENST00000473417 FAAP100Q0VG06 881 aa21.01■□□□□ 0.95
SNX4-204ENST00000473417 TCEANC2Q96MN5 208 aa21.01■□□□□ 0.95
SNX4-204ENST00000473417 JAKMIP1Q96N16 626 aaKnown RBP21.01■□□□□ 0.95
SNX4-204ENST00000473417 MTA3Q9BTC8 594 aa21.01■□□□□ 0.95
SNX4-204ENST00000473417 CPVLQ9H3G5 476 aa21.01■□□□□ 0.95
SNX4-204ENST00000473417 LY9Q9HBG7 655 aa21.01■□□□□ 0.95
SNX4-204ENST00000473417 PDGFCQ9NRA1 345 aa21.01■□□□□ 0.95
SNX4-204ENST00000473417 MROH7Q68CQ1 1323 aa21.01■□□□□ 0.95
SNX4-204ENST00000473417 PTPDC1A2A3K4 754 aa21■□□□□ 0.95
SNX4-204ENST00000473417 SH2B2O14492 632 aaPredicted RBP21■□□□□ 0.95
SNX4-204ENST00000473417 SMPD1P17405 629 aa21■□□□□ 0.95
SNX4-204ENST00000473417 CDK7P50613 346 aa21■□□□□ 0.95
SNX4-204ENST00000473417 BEX3Q00994 111 aa21■□□□□ 0.95
SNX4-204ENST00000473417 ASPRV1Q53RT3 343 aa21■□□□□ 0.95
SNX4-204ENST00000473417 NFXL1Q6ZNB6 911 aa21■□□□□ 0.95
SNX4-204ENST00000473417 RNF207Q6ZRF8 634 aa21■□□□□ 0.95
SNX4-204ENST00000473417 DHX32Q7L7V1 743 aaKnown RBP21■□□□□ 0.95
SNX4-204ENST00000473417 EEPD1Q7L9B9 569 aa21■□□□□ 0.95
SNX4-204ENST00000473417 A0A0U1RQG5 324 aaPredicted RBP20.99■□□□□ 0.95
SNX4-204ENST00000473417 DCDC2CA8MYV0 355 aa20.99■□□□□ 0.95
SNX4-204ENST00000473417 CPA1P15085 419 aa20.99■□□□□ 0.95
SNX4-204ENST00000473417 RPS6P62753 249 aaKnown RBP20.99■□□□□ 0.95
SNX4-204ENST00000473417 EXOSC10Q01780 885 aaKnown RBP20.99■□□□□ 0.95
SNX4-204ENST00000473417 SHHQ15465 462 aa20.99■□□□□ 0.95
SNX4-204ENST00000473417 C9orf50Q5SZB4 431 aa20.99■□□□□ 0.95
SNX4-204ENST00000473417 IQSEC1Q6DN90 963 aa20.99■□□□□ 0.95
SNX4-204ENST00000473417 NOL8Q76FK4 1167 aaKnown RBP20.99■□□□□ 0.95
SNX4-204ENST00000473417 Q7L0L9 218 aa20.99■□□□□ 0.95
SNX4-204ENST00000473417 CATIPQ7Z7H3 387 aa20.99■□□□□ 0.95
SNX4-204ENST00000473417 TMEM39AQ9NV64 488 aa20.99■□□□□ 0.95
SNX4-204ENST00000473417 Q9Y3F1 56 aa20.99■□□□□ 0.95
SNX4-204ENST00000473417 CCDC69A6NI79 296 aa20.98■□□□□ 0.95
SNX4-204ENST00000473417 HMGB1P09429 215 aaKnown RBP20.98■□□□□ 0.95
SNX4-204ENST00000473417 RAG1P15918 1043 aa20.98■□□□□ 0.95
SNX4-204ENST00000473417 PTGS1P23219 599 aa20.98■□□□□ 0.95
SNX4-204ENST00000473417 CALML3P27482 149 aa20.98■□□□□ 0.95
SNX4-204ENST00000473417 CDC37Q16543 378 aaPredicted RBP20.98■□□□□ 0.95
SNX4-204ENST00000473417 USH1GQ495M9 461 aa20.98■□□□□ 0.95
SNX4-204ENST00000473417 TMEM63BQ5T3F8 832 aa20.98■□□□□ 0.95
SNX4-204ENST00000473417 STAG2Q8N3U4 1231 aa20.98■□□□□ 0.95
SNX4-204ENST00000473417 MYL10Q9BUA6 226 aa20.98■□□□□ 0.95
SNX4-204ENST00000473417 MTMR10Q9NXD2 777 aa20.98■□□□□ 0.95
SNX4-204ENST00000473417 TBX21Q9UL17 535 aa20.98■□□□□ 0.95
SNX4-204ENST00000473417 ARVCFO00192 962 aa20.97■□□□□ 0.95
SNX4-204ENST00000473417 SEC24BO95487 1268 aa20.97■□□□□ 0.95
SNX4-204ENST00000473417 EDNRBP24530 442 aa20.97■□□□□ 0.95
SNX4-204ENST00000473417 LIFRP42702 1097 aa20.97■□□□□ 0.95
SNX4-204ENST00000473417 TROAPQ12815 778 aa20.97■□□□□ 0.95
SNX4-204ENST00000473417 GRM4Q14833 912 aa20.97■□□□□ 0.95
SNX4-204ENST00000473417 FSCN1Q16658 493 aaKnown RBP20.97■□□□□ 0.95
SNX4-204ENST00000473417 ADGRF4Q8IZF3 695 aa20.97■□□□□ 0.95
SNX4-204ENST00000473417 ZNF654Q8IZM8 581 aa20.97■□□□□ 0.95
SNX4-204ENST00000473417 TMTC2Q8N394 836 aa20.97■□□□□ 0.95
SNX4-204ENST00000473417 DNERQ8NFT8 737 aa20.97■□□□□ 0.95
SNX4-204ENST00000473417 AP5M1Q9H0R1 490 aa20.97■□□□□ 0.95
SNX4-204ENST00000473417 VAT1LQ9HCJ6 419 aa20.97■□□□□ 0.95
SNX4-204ENST00000473417 MAD2L2Q9UI95 211 aa20.97■□□□□ 0.95
SNX4-204ENST00000473417 SCN10AQ9Y5Y9 1956 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms