RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 MACROD2A1Z1Q3 448 aa23.56■■□□□ 1.36
COL18A1-207ENST00000473212 MCM3P25205 808 aa23.56■■□□□ 1.36
COL18A1-207ENST00000473212 ASIC1P78348 528 aa23.56■■□□□ 1.36
COL18A1-207ENST00000473212 CKAP4Q07065 602 aaKnown RBP23.56■■□□□ 1.36
COL18A1-207ENST00000473212 MAP9Q49MG5 647 aa23.56■■□□□ 1.36
COL18A1-207ENST00000473212 ZNF662Q6ZS27 426 aa23.56■■□□□ 1.36
COL18A1-207ENST00000473212 KRT26Q7Z3Y9 468 aa23.56■■□□□ 1.36
COL18A1-207ENST00000473212 GSPT2Q8IYD1 628 aaKnown RBP23.56■■□□□ 1.36
COL18A1-207ENST00000473212 DHTKD1Q96HY7 919 aaPredicted RBP23.56■■□□□ 1.36
COL18A1-207ENST00000473212 CNOT6LQ96LI5 555 aaKnown RBP23.56■■□□□ 1.36
COL18A1-207ENST00000473212 UBA5Q9GZZ9 404 aa23.56■■□□□ 1.36
COL18A1-207ENST00000473212 VGLL3A8MV65 326 aa23.55■■□□□ 1.36
COL18A1-207ENST00000473212 PDE2AO00408 941 aaPredicted RBP23.55■■□□□ 1.36
COL18A1-207ENST00000473212 IPO7O95373 1038 aaKnown RBP23.55■■□□□ 1.36
COL18A1-207ENST00000473212 MYL1P05976 194 aa23.55■■□□□ 1.36
COL18A1-207ENST00000473212 AARSP49588 968 aaKnown RBP eCLIP23.55■■□□□ 1.363e-8■■■■■ 82.4
COL18A1-207ENST00000473212 SMCR8Q8TEV9 937 aaPredicted RBP23.55■■□□□ 1.36
COL18A1-207ENST00000473212 NOC3LQ8WTT2 800 aaKnown RBP23.55■■□□□ 1.36
COL18A1-207ENST00000473212 MMTAG2Q9BU76 263 aaKnown RBP23.55■■□□□ 1.36
COL18A1-207ENST00000473212 RASSF4Q9H2L5 321 aa23.55■■□□□ 1.36
COL18A1-207ENST00000473212 BIN2Q9UBW5 565 aaPredicted RBP23.55■■□□□ 1.36
COL18A1-207ENST00000473212 MYH1P12882 1939 aa23.55■■□□□ 1.36
COL18A1-207ENST00000473212 RPS6KA5O75582 802 aa23.55■■□□□ 1.36
COL18A1-207ENST00000473212 ZBED6P86452 979 aa23.55■■□□□ 1.36
COL18A1-207ENST00000473212 ANKS1AQ92625 1134 aa23.55■■□□□ 1.36
COL18A1-207ENST00000473212 P2RX5Q93086 422 aa23.55■■□□□ 1.36
COL18A1-207ENST00000473212 NUP58Q9BVL2 599 aa23.55■■□□□ 1.36
COL18A1-207ENST00000473212 EIF3CLB5ME19 914 aaKnown RBP23.54■■□□□ 1.36
COL18A1-207ENST00000473212 EPHB6O15197 1021 aa23.54■■□□□ 1.36
COL18A1-207ENST00000473212 MTIF2P46199 727 aaKnown RBP23.54■■□□□ 1.36
COL18A1-207ENST00000473212 MIIPQ5JXC2 388 aa23.54■■□□□ 1.36
COL18A1-207ENST00000473212 POTEDQ86YR6 584 aa23.54■■□□□ 1.36
COL18A1-207ENST00000473212 KIAA0895Q8NCT3 520 aa23.54■■□□□ 1.36
COL18A1-207ENST00000473212 RIN2Q8WYP3 895 aaPredicted RBP23.54■■□□□ 1.36
COL18A1-207ENST00000473212 RPGRIP1Q96KN7 1286 aa23.54■■□□□ 1.36
COL18A1-207ENST00000473212 EIF3CQ99613 913 aaKnown RBP23.54■■□□□ 1.36
COL18A1-207ENST00000473212 SLC39A2Q9NP94 309 aa23.54■■□□□ 1.36
COL18A1-207ENST00000473212 JADE2Q9NQC1 790 aa23.54■■□□□ 1.36
COL18A1-207ENST00000473212 TARSL2A2RTX5 802 aaKnown RBP23.54■■□□□ 1.36
COL18A1-207ENST00000473212 SMCO2A6NFE2 343 aa23.54■■□□□ 1.36
COL18A1-207ENST00000473212 OR52Z1P0C646 297 aa23.54■■□□□ 1.36
COL18A1-207ENST00000473212 MYBL2P10244 700 aa23.54■■□□□ 1.36
COL18A1-207ENST00000473212 IDEP14735 1019 aa23.54■■□□□ 1.36
COL18A1-207ENST00000473212 CCNE1P24864 410 aa23.54■■□□□ 1.36
COL18A1-207ENST00000473212 LRRC31Q6UY01 552 aa23.54■■□□□ 1.36
COL18A1-207ENST00000473212 ZNF263O14978 683 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 ZPR1O75312 459 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 CCDC170Q8IYT3 715 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 DAGLBQ8NCG7 672 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 COG1Q8WTW3 980 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 PIGSQ96S52 555 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 NOC4LQ9BVI4 516 aaKnown RBP23.53■■□□□ 1.36
COL18A1-207ENST00000473212 TNRC6CQ9HCJ0 1690 aaKnown RBP23.53■■□□□ 1.36
COL18A1-207ENST00000473212 EP400Q96L91 3159 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 PRPF6O94906 941 aaKnown RBP23.53■■□□□ 1.36
COL18A1-207ENST00000473212 C2orf54Q08AI8 447 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 MAPK8IP2Q13387 824 aaPredicted RBP23.53■■□□□ 1.36
COL18A1-207ENST00000473212 TPTE2Q6XPS3 522 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 CLEC10AQ8IUN9 316 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 GOLGA6L1Q8N7Z2 621 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 RETREG2Q8NC44 543 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 AFAP1L1Q8TED9 768 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 NYXQ9GZU5 481 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 SEMA6BQ9H3T3 888 aa23.53■■□□□ 1.36
COL18A1-207ENST00000473212 ZC3H4Q9UPT8 1303 aaKnown RBP23.52■■□□□ 1.36
COL18A1-207ENST00000473212 ATP2B2Q01814 1243 aa23.52■■□□□ 1.36
COL18A1-207ENST00000473212 TBCKQ8TEA7 893 aa23.52■■□□□ 1.36
COL18A1-207ENST00000473212 SNED1Q8TER0 1413 aa23.52■■□□□ 1.36
COL18A1-207ENST00000473212 UIMC1Q96RL1 719 aa23.52■■□□□ 1.36
COL18A1-207ENST00000473212 ZMYND12Q9H0C1 365 aa23.52■■□□□ 1.36
COL18A1-207ENST00000473212 TXKP42681 527 aa23.52■■□□□ 1.35
COL18A1-207ENST00000473212 MRPS25P82663 173 aaKnown RBP23.52■■□□□ 1.35
COL18A1-207ENST00000473212 GLIS3Q8NEA6 775 aa23.52■■□□□ 1.35
COL18A1-207ENST00000473212 GJA10Q969M2 543 aa23.52■■□□□ 1.35
COL18A1-207ENST00000473212 EYA3Q99504 573 aa23.52■■□□□ 1.35
COL18A1-207ENST00000473212 MAST2Q6P0Q8 1798 aa23.51■■□□□ 1.35
COL18A1-207ENST00000473212 BICDL2A1A5D9 508 aa23.51■■□□□ 1.35
COL18A1-207ENST00000473212 CDK8P49336 464 aa23.51■■□□□ 1.35
COL18A1-207ENST00000473212 GNAQP50148 359 aa23.51■■□□□ 1.35
COL18A1-207ENST00000473212 KIF5AQ12840 1032 aa23.51■■□□□ 1.35
COL18A1-207ENST00000473212 SPTY2D1Q68D10 685 aaPredicted RBP23.51■■□□□ 1.35
COL18A1-207ENST00000473212 DYMQ7RTS9 669 aa23.51■■□□□ 1.35
COL18A1-207ENST00000473212 ARHGEF1Q92888 912 aaKnown RBP23.51■■□□□ 1.35
COL18A1-207ENST00000473212 PURBQ96QR8 312 aaKnown RBP23.51■■□□□ 1.35
COL18A1-207ENST00000473212 RTFDC1Q9BY42 306 aaPredicted RBP23.51■■□□□ 1.35
COL18A1-207ENST00000473212 TCP11L1Q9NUJ3 509 aa23.51■■□□□ 1.35
COL18A1-207ENST00000473212 LRWD1Q9UFC0 647 aa23.51■■□□□ 1.35
COL18A1-207ENST00000473212 SBF2Q86WG5 1849 aa23.51■■□□□ 1.35
COL18A1-207ENST00000473212 FRMPD2Q68DX3 1309 aaPredicted RBP23.51■■□□□ 1.35
COL18A1-207ENST00000473212 ANO9A1A5B4 782 aa23.51■■□□□ 1.35
COL18A1-207ENST00000473212 CCNI2Q6ZMN8 369 aaPredicted RBP23.51■■□□□ 1.35
COL18A1-207ENST00000473212 SECISBP2LQ93073 1101 aaKnown RBP23.51■■□□□ 1.35
COL18A1-207ENST00000473212 CEP95Q96GE4 821 aa23.51■■□□□ 1.35
COL18A1-207ENST00000473212 PLEKHA4Q9H4M7 779 aa23.51■■□□□ 1.35
COL18A1-207ENST00000473212 CNTNAP4Q9C0A0 1308 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 GGCXP38435 758 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 BTDP43251 543 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 VAV2P52735 878 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 NONOQ15233 471 aaKnown RBP eCLIP23.5■■□□□ 1.35
COL18A1-207ENST00000473212 CCDC47Q96A33 483 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms