RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 MCF2L2Q86YR7 1114 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 FMR1NBQ8N0W7 255 aaPredicted RBP14.57□□□□□ -0.08
VPS13D-205ENST00000473099 ANO3Q9BYT9 981 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 GOLPH3LQ9H4A5 285 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 HOXC10Q9NYD6 342 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 CCPG1Q9ULG6 757 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 KCNH4Q9UQ05 1017 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 HPSEQ9Y251 543 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 RABGAP1Q9Y3P9 1069 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 A0A0G2JLL6 359 aaPredicted RBP14.56□□□□□ -0.08
VPS13D-205ENST00000473099 A0A1B0GVL5 298 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 GCOM1H8Y6P7 765 aaPredicted RBP14.56□□□□□ -0.08
VPS13D-205ENST00000473099 POLR2MP0CAP2 368 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 PFKFB1P16118 471 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 SYKP43405 635 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 SNAP25P60880 206 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 GHRHRQ02643 423 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 PABPC4Q13310 644 aaKnown RBP eCLIP14.56□□□□□ -0.08
VPS13D-205ENST00000473099 SNW1Q13573 536 aaKnown RBP14.56□□□□□ -0.08
VPS13D-205ENST00000473099 UBE2SQ16763 222 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 TKFCQ3LXA3 575 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 SHC4Q6S5L8 630 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 DTHD1Q6ZMT9 781 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 PRRT2Q7Z6L0 340 aaPredicted RBP14.56□□□□□ -0.08
VPS13D-205ENST00000473099 SMC1BQ8NDV3 1235 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 AK8Q96MA6 479 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 ELP3Q9H9T3 547 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 TMEM260Q9NX78 707 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 USP25Q9UHP3 1055 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 HOOK1Q9UJC3 728 aaKnown RBP14.56□□□□□ -0.08
VPS13D-205ENST00000473099 ADAMTS5Q9UNA0 930 aa14.56□□□□□ -0.08
VPS13D-205ENST00000473099 SYCE3A1L190 88 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 VWA5AO00534 786 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 WNT7AO00755 349 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 ATP2A1O14983 1001 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 ZNF202O95125 648 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 OR52Z1P0C646 297 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 HOXA7P31268 230 aaPredicted RBP14.55□□□□□ -0.08
VPS13D-205ENST00000473099 SREBF1P36956 1147 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 TXLNAP40222 546 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 NDUFA8P51970 172 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 MAP1SQ66K74 1059 aaPredicted RBP14.55□□□□□ -0.08
VPS13D-205ENST00000473099 KANK3Q6NY19 840 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 USP17L6PQ6QN14 398 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
VPS13D-205ENST00000473099 RBM43Q6ZSC3 357 aaKnown RBP14.55□□□□□ -0.08
VPS13D-205ENST00000473099 FASTKD5Q7L8L6 764 aaKnown RBP14.55□□□□□ -0.08
VPS13D-205ENST00000473099 ELOA2Q8IYF1 753 aaPredicted RBP14.55□□□□□ -0.08
VPS13D-205ENST00000473099 MB21D1Q8N884 522 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 C4orf32Q8N8J7 132 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 CLIC6Q96NY7 704 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 RAB34Q9BZG1 259 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 KCNH3Q9ULD8 1083 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 ZNF536O15090 1300 aa14.55□□□□□ -0.08
VPS13D-205ENST00000473099 WDR81Q562E7 1941 aa14.54□□□□□ -0.08
VPS13D-205ENST00000473099 CYP3A7-CYP3A51PA0A087WV96 503 aa14.54□□□□□ -0.08
VPS13D-205ENST00000473099 GOLGA6L3A6NEY3 463 aa14.54□□□□□ -0.08
VPS13D-205ENST00000473099 OPLAHO14841 1288 aa14.54□□□□□ -0.08
VPS13D-205ENST00000473099 CYP3A7P24462 503 aa14.54□□□□□ -0.08
VPS13D-205ENST00000473099 TMEM266Q2M3C6 531 aa14.54□□□□□ -0.08
VPS13D-205ENST00000473099 L1TD1Q5T7N2 865 aaKnown RBP14.54□□□□□ -0.08
VPS13D-205ENST00000473099 DLK2Q6UY11 383 aa14.54□□□□□ -0.08
VPS13D-205ENST00000473099 C2orf69Q8N8R5 385 aa14.54□□□□□ -0.08
VPS13D-205ENST00000473099 OTUD5Q96G74 571 aa14.54□□□□□ -0.08
VPS13D-205ENST00000473099 CSRNP2Q9H175 543 aa14.54□□□□□ -0.08
VPS13D-205ENST00000473099 VWA3AA6NCI4 1184 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 IRF6O14896 467 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 CFBP00751 764 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 CYP3A4P08684 503 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 CCDC192P0DO97 292 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 HSD17B4P51659 736 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 ARHGAP4P98171 946 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 DGKZQ13574 1117 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 CALCRLQ16602 461 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 CRYGNQ8WXF5 182 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 OPTNQ96CV9 577 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 ATG4CQ96DT6 458 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 SLC10A4Q96EP9 437 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 CLMNQ96JQ2 1002 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 MBOAT7Q96N66 472 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 SDF4Q9BRK5 362 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 TSPY26PQ9H489 355 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 GBA2Q9HCG7 927 aaPredicted RBP14.53□□□□□ -0.08
VPS13D-205ENST00000473099 DDX25Q9UHL0 483 aaKnown RBP14.53□□□□□ -0.08
VPS13D-205ENST00000473099 LCTP09848 1927 aa14.53□□□□□ -0.08
VPS13D-205ENST00000473099 FSD2A1L4K1 749 aa14.52□□□□□ -0.09
VPS13D-205ENST00000473099 TBX3O15119 743 aa14.52□□□□□ -0.09
VPS13D-205ENST00000473099 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
VPS13D-205ENST00000473099 POTEJP0CG39 1038 aa14.52□□□□□ -0.09
VPS13D-205ENST00000473099 ALAS1P13196 640 aa14.52□□□□□ -0.09
VPS13D-205ENST00000473099 CIITAP33076 1130 aa14.52□□□□□ -0.09
VPS13D-205ENST00000473099 SNAPC2Q13487 334 aa14.52□□□□□ -0.09
VPS13D-205ENST00000473099 LBX2Q6XYB7 198 aa14.52□□□□□ -0.09
VPS13D-205ENST00000473099 GADL1Q6ZQY3 521 aa14.52□□□□□ -0.09
VPS13D-205ENST00000473099 CPXCR1Q8N123 301 aa14.52□□□□□ -0.09
VPS13D-205ENST00000473099 REPS2Q8NFH8 660 aa14.52□□□□□ -0.09
VPS13D-205ENST00000473099 AGBL1Q96MI9 1066 aa14.52□□□□□ -0.09
VPS13D-205ENST00000473099 TEX13BQ9BXU2 312 aa14.52□□□□□ -0.09
VPS13D-205ENST00000473099 RAVER2Q9HCJ3 691 aaKnown RBP14.52□□□□□ -0.09
VPS13D-205ENST00000473099 AGTPBP1Q9UPW5 1226 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms