RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 FAM76AQ8TAV0 307 aa11.33□□□□□ -0.6
APTX-216ENST00000472896 ZNF274Q96GC6 653 aaPredicted RBP11.33□□□□□ -0.6
APTX-216ENST00000472896 DACH1Q9UI36 760 aa11.33□□□□□ -0.6
APTX-216ENST00000472896 COL6A3P12111 3177 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 TMEM232C9JQI7 657 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 AKR1B15C9JRZ8 316 aaPredicted RBP11.32□□□□□ -0.6
APTX-216ENST00000472896 BIN1O00499 593 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 EVI5O60447 810 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 FSBPO95073 299 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 CTDNEP1O95476 244 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 BCRP11274 1271 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 RDXP35241 583 aaKnown RBP11.32□□□□□ -0.6
APTX-216ENST00000472896 HDLBPQ00341 1268 aaKnown RBP11.32□□□□□ -0.6
APTX-216ENST00000472896 KARSQ15046 597 aaKnown RBP11.32□□□□□ -0.6
APTX-216ENST00000472896 CCDC57Q2TAC2 916 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 BEND3Q5T5X7 828 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 DHX32Q7L7V1 743 aaKnown RBP11.32□□□□□ -0.6
APTX-216ENST00000472896 FAM83AQ86UY5 434 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 AACSQ86V21 672 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 PDILTQ8N807 584 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 CCDC51Q96ER9 411 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 RPGRIP1Q96KN7 1286 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 NAPGQ99747 312 aaPredicted RBP11.32□□□□□ -0.6
APTX-216ENST00000472896 HPCAL4Q9UM19 191 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 KCNH4Q9UQ05 1017 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 ADGRG1Q9Y653 693 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 A0A0C4DFX4 3053 aa11.32□□□□□ -0.6
APTX-216ENST00000472896 A0A1W2PPC1 479 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 CYP2C8P10632 490 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 PFKFB1P16118 471 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 ARHGAP25P42331 645 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 CCT5P48643 541 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 MNX1P50219 401 aaPredicted RBP11.31□□□□□ -0.6
APTX-216ENST00000472896 IRAK1P51617 712 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 UBXN2AP68543 259 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 STIM1Q13586 685 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 NBPF20Q3BBV1 942 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 LRCH2Q5VUJ6 765 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 MICALCLQ6ZW33 695 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 TICAM2Q86XR7 235 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 IGSF22Q8N9C0 903 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 XAGE2Q96GT9 111 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 ZDHHC15Q96MV8 337 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 MCM8Q9UJA3 840 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 HOOK1Q9UJC3 728 aaKnown RBP11.31□□□□□ -0.6
APTX-216ENST00000472896 ZNF112Q9UJU3 913 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 ANKRD65E5RJM6 399 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 TFRCP02786 760 aaKnown RBP11.31□□□□□ -0.6
APTX-216ENST00000472896 RHOXF2BP0C7M4 288 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 ELNP15502 786 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 ELF1P32519 619 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 SYKP43405 635 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 COL9A3Q14050 684 aaPredicted RBP11.31□□□□□ -0.6
APTX-216ENST00000472896 PREPLQ4J6C6 727 aaPredicted RBP11.31□□□□□ -0.6
APTX-216ENST00000472896 Q7L0L9 218 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 RASGRP2Q7LDG7 609 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 RUBCNQ92622 972 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 TEKT1Q969V4 418 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 RHOXF2Q9BQY4 288 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.31□□□□□ -0.6
APTX-216ENST00000472896 ZNF341Q9BYN7 854 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 SIL1Q9H173 461 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 ZSWIM4Q9H7M6 989 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 MRPL44Q9H9J2 332 aaKnown RBP11.31□□□□□ -0.6
APTX-216ENST00000472896 INTS13Q9NVM9 706 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 FANCLQ9NW38 375 aa11.31□□□□□ -0.6
APTX-216ENST00000472896 GOLGA8KD6RF30 607 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 EIF3HO15372 352 aaKnown RBP eCLIP11.3□□□□□ -0.6
APTX-216ENST00000472896 ADCY3O60266 1144 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 PHACTR2O75167 634 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 PPP6R2O75170 966 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 KIAA0754O94854 1291 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 NBPF7P0C2Y1 421 aaPredicted RBP11.3□□□□□ -0.6
APTX-216ENST00000472896 USP14P54578 494 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 PLCB4Q15147 1175 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 ZNF569Q5MCW4 686 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 FKBP1CQ5VVH2 108 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 SYNE3Q6ZMZ3 975 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 YTHDF3Q7Z739 585 aaKnown RBP11.3□□□□□ -0.6
APTX-216ENST00000472896 EGFL6Q8IUX8 553 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 FMNL3Q8IVF7 1028 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 FBXL16Q8N461 479 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 SLAIN1Q8ND83 568 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 ENOX1Q8TC92 643 aaKnown RBP11.3□□□□□ -0.6
APTX-216ENST00000472896 COG1Q8WTW3 980 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 MIEF2Q96C03 454 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 DEFB118Q96PH6 123 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 PAGR1Q9BTK6 254 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 MRIQ9BWK5 157 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 SUGCTQ9HAC7 445 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 HPSEQ9Y251 543 aa11.3□□□□□ -0.6
APTX-216ENST00000472896 INHAP05111 366 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 FECHP22830 423 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 FLT3LGP49771 235 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 FCGRTP55899 365 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 GOLGA8FQ08AF8 430 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 GOLGA8DPQ0D2H9 430 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 CRYMQ14894 314 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 MYSM1Q5VVJ2 828 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 ANO1Q5XXA6 986 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms