RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 MSL3P1P0C860 447 aa8.49□□□□□ -1.05
CLK1-209ENST00000472679 LCP1P13796 627 aa8.49□□□□□ -1.05
CLK1-209ENST00000472679 USP53Q70EK8 1073 aa8.49□□□□□ -1.05
CLK1-209ENST00000472679 NLRX1Q86UT6 975 aa8.49□□□□□ -1.05
CLK1-209ENST00000472679 SIRT2Q8IXJ6 389 aa8.49□□□□□ -1.05
CLK1-209ENST00000472679 KISS1RQ969F8 398 aaPredicted RBP8.49□□□□□ -1.05
CLK1-209ENST00000472679 MEFVO15553 781 aaPredicted RBP8.48□□□□□ -1.05
CLK1-209ENST00000472679 ACBD5Q5T8D3 534 aaPredicted RBP8.48□□□□□ -1.05
CLK1-209ENST00000472679 GALNT18Q6P9A2 607 aa8.48□□□□□ -1.05
CLK1-209ENST00000472679 LILRA2Q8N149 483 aa8.48□□□□□ -1.05
CLK1-209ENST00000472679 DHRS4Q9BTZ2 278 aa8.48□□□□□ -1.05
CLK1-209ENST00000472679 MRPS23Q9Y3D9 190 aaKnown RBP8.48□□□□□ -1.05
CLK1-209ENST00000472679 TAF6LQ9Y6J9 622 aa8.48□□□□□ -1.05
CLK1-209ENST00000472679 TRBV23OR9-2A0A075B6M9 112 aa8.47□□□□□ -1.05
CLK1-209ENST00000472679 ESYT3A0FGR9 886 aa8.47□□□□□ -1.05
CLK1-209ENST00000472679 PRKCAP17252 672 aa8.47□□□□□ -1.05
CLK1-209ENST00000472679 MVKQ03426 396 aa8.47□□□□□ -1.05
CLK1-209ENST00000472679 TESK1Q15569 626 aa8.47□□□□□ -1.05
CLK1-209ENST00000472679 E4F1Q66K89 784 aaPredicted RBP8.47□□□□□ -1.05
CLK1-209ENST00000472679 RCBTB1Q8NDN9 531 aa8.47□□□□□ -1.05
CLK1-209ENST00000472679 ZSWIM2Q8NEG5 633 aa8.47□□□□□ -1.05
CLK1-209ENST00000472679 DPF3Q92784 378 aa8.47□□□□□ -1.05
CLK1-209ENST00000472679 DIO2Q92813 273 aa8.47□□□□□ -1.05
CLK1-209ENST00000472679 ASIC4Q96FT7 647 aa8.47□□□□□ -1.05
CLK1-209ENST00000472679 SLC26A8Q96RN1 970 aa8.47□□□□□ -1.05
CLK1-209ENST00000472679 ACSL6Q9UKU0 697 aa8.47□□□□□ -1.05
CLK1-209ENST00000472679 TBX22Q9Y458 520 aa8.47□□□□□ -1.05
CLK1-209ENST00000472679 CARMIL2Q6F5E8 1435 aa8.46□□□□□ -1.05
CLK1-209ENST00000472679 LOC100996750A0A140TA64 210 aa8.46□□□□□ -1.06
CLK1-209ENST00000472679 C6orf222P0C671 652 aaPredicted RBP8.46□□□□□ -1.06
CLK1-209ENST00000472679 TAL1P17542 331 aaPredicted RBP8.46□□□□□ -1.06
CLK1-209ENST00000472679 LTBRP36941 435 aa8.46□□□□□ -1.06
CLK1-209ENST00000472679 TMEM67Q5HYA8 995 aa8.46□□□□□ -1.06
CLK1-209ENST00000472679 KCNT2Q6UVM3 1135 aa8.46□□□□□ -1.06
CLK1-209ENST00000472679 ZSWIM9Q86XI8 627 aa8.46□□□□□ -1.06
CLK1-209ENST00000472679 NUP43Q8NFH3 380 aa8.46□□□□□ -1.06
CLK1-209ENST00000472679 KRTAP4-6Q9BYQ5 205 aa8.46□□□□□ -1.06
CLK1-209ENST00000472679 GULP1Q9UBP9 304 aa8.46□□□□□ -1.06
CLK1-209ENST00000472679 FBLN5Q9UBX5 448 aa8.46□□□□□ -1.06
CLK1-209ENST00000472679 NPFFR2Q9Y5X5 522 aa8.46□□□□□ -1.06
CLK1-209ENST00000472679 ASXL2Q76L83 1435 aa8.46□□□□□ -1.06
CLK1-209ENST00000472679 BIN1O00499 593 aa8.45□□□□□ -1.06
CLK1-209ENST00000472679 MSCO60682 206 aa8.45□□□□□ -1.06
CLK1-209ENST00000472679 SUMO1P63165 101 aaKnown RBP8.45□□□□□ -1.06
CLK1-209ENST00000472679 IQCEQ6IPM2 695 aa8.45□□□□□ -1.06
CLK1-209ENST00000472679 IPO9Q96P70 1041 aaKnown RBP8.45□□□□□ -1.06
CLK1-209ENST00000472679 FBXL7Q9UJT9 491 aa8.45□□□□□ -1.06
CLK1-209ENST00000472679 RWDD3Q9Y3V2 267 aa8.45□□□□□ -1.06
CLK1-209ENST00000472679 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.44□□□□□ -1.06
CLK1-209ENST00000472679 NPHS1O60500 1241 aa8.44□□□□□ -1.06
CLK1-209ENST00000472679 TACR1P25103 407 aa8.44□□□□□ -1.06
CLK1-209ENST00000472679 KCNAB2Q13303 367 aa8.44□□□□□ -1.06
CLK1-209ENST00000472679 SNX17Q15036 470 aa8.44□□□□□ -1.06
CLK1-209ENST00000472679 KCNMB1Q16558 191 aa8.44□□□□□ -1.06
CLK1-209ENST00000472679 ZC3H12BQ5HYM0 836 aaKnown RBP8.44□□□□□ -1.06
CLK1-209ENST00000472679 NLGN1Q8N2Q7 840 aa8.44□□□□□ -1.06
CLK1-209ENST00000472679 NLGN2Q8NFZ4 835 aa8.44□□□□□ -1.06
CLK1-209ENST00000472679 FAM168AQ92567 244 aa8.44□□□□□ -1.06
CLK1-209ENST00000472679 PHF20Q9BVI0 1012 aa8.44□□□□□ -1.06
CLK1-209ENST00000472679 TMEM260Q9NX78 707 aa8.44□□□□□ -1.06
CLK1-209ENST00000472679 YBX2Q9Y2T7 364 aaKnown RBP8.44□□□□□ -1.06
CLK1-209ENST00000472679 TRAF6Q9Y4K3 522 aa8.44□□□□□ -1.06
CLK1-209ENST00000472679 A0A1W2PQ27 194 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 A0A1W2PQ64 194 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 A0A1W2PQC6 194 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 A0A1W2PQD8 194 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 TLDC2A0PJX2 215 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 ZNF503-AS2A6NEH8 195 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 GLI1P08151 1106 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 JUNBP17275 347 aaPredicted RBP8.43□□□□□ -1.06
CLK1-209ENST00000472679 SDHBP21912 280 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 CYP4F8P98187 520 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 DCAF4Q8WV16 495 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 MTA3Q9BTC8 594 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 FANCLQ9NW38 375 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 BTG4Q9NY30 223 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 PCDHA2Q9Y5H9 948 aa8.43□□□□□ -1.06
CLK1-209ENST00000472679 PPP1R12AO14974 1030 aaPredicted RBP8.42□□□□□ -1.06
CLK1-209ENST00000472679 PNLIPP16233 465 aa8.42□□□□□ -1.06
CLK1-209ENST00000472679 BCL6P41182 706 aa8.42□□□□□ -1.06
CLK1-209ENST00000472679 CBX2Q14781 532 aaPredicted RBP8.42□□□□□ -1.06
CLK1-209ENST00000472679 STYK1Q6J9G0 422 aa8.42□□□□□ -1.06
CLK1-209ENST00000472679 LIN37Q96GY3 246 aaPredicted RBP8.42□□□□□ -1.06
CLK1-209ENST00000472679 CRTAC1Q9NQ79 661 aa8.42□□□□□ -1.06
CLK1-209ENST00000472679 PDLIM7Q9NR12 457 aa8.42□□□□□ -1.06
CLK1-209ENST00000472679 GPR27Q9NS67 375 aa8.42□□□□□ -1.06
CLK1-209ENST00000472679 TIMM13Q9Y5L4 95 aaPredicted RBP8.42□□□□□ -1.06
CLK1-209ENST00000472679 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.42□□□□□ -1.06
CLK1-209ENST00000472679 FUCA1P04066 466 aa8.41□□□□□ -1.06
CLK1-209ENST00000472679 CORO7P57737 925 aa8.41□□□□□ -1.06
CLK1-209ENST00000472679 NLRP10Q86W26 655 aa8.41□□□□□ -1.06
CLK1-209ENST00000472679 TEX2Q8IWB9 1127 aa8.41□□□□□ -1.06
CLK1-209ENST00000472679 INTS4Q96HW7 963 aaKnown RBP8.41□□□□□ -1.06
CLK1-209ENST00000472679 MARCH2Q9P0N8 246 aa8.41□□□□□ -1.06
CLK1-209ENST00000472679 RPL11P62913 178 aaKnown RBP8.4□□□□□ -1.06
CLK1-209ENST00000472679 MCTP1Q6DN14 999 aa8.4□□□□□ -1.06
CLK1-209ENST00000472679 RSPO2Q6UXX9 243 aaPredicted RBP8.4□□□□□ -1.06
CLK1-209ENST00000472679 LZTR1Q8N653 840 aa8.4□□□□□ -1.06
CLK1-209ENST00000472679 SLC7A14Q8TBB6 771 aa8.4□□□□□ -1.06
CLK1-209ENST00000472679 PLEKHO2Q8TD55 490 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms