RNA–Protein interactions for RNA: ENST00000472390.1

RHBDF1-207, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-207ENST00000472390 ZKSCAN3Q9BRR0 538 aa22.33■■□□□ 1.17
RHBDF1-207ENST00000472390 HIPK3Q9H422 1215 aa22.33■■□□□ 1.17
RHBDF1-207ENST00000472390 PRDM12Q9H4Q4 367 aa22.33■■□□□ 1.17
RHBDF1-207ENST00000472390 TMEM265A0A087WTH1 108 aa22.32■■□□□ 1.16
RHBDF1-207ENST00000472390 PTPDC1A2A3K4 754 aa22.32■■□□□ 1.16
RHBDF1-207ENST00000472390 PDHBP11177 359 aa22.32■■□□□ 1.16
RHBDF1-207ENST00000472390 CALML3P27482 149 aa22.32■■□□□ 1.16
RHBDF1-207ENST00000472390 BTNL9Q6UXG8 535 aa22.32■■□□□ 1.16
RHBDF1-207ENST00000472390 TMEM199Q8N511 208 aa22.32■■□□□ 1.16
RHBDF1-207ENST00000472390 CLEC4DQ8WXI8 215 aa22.32■■□□□ 1.16
RHBDF1-207ENST00000472390 COPS5Q92905 334 aa22.32■■□□□ 1.16
RHBDF1-207ENST00000472390 NOC4LQ9BVI4 516 aaKnown RBP22.32■■□□□ 1.16
RHBDF1-207ENST00000472390 IL23AQ9NPF7 189 aa22.32■■□□□ 1.16
RHBDF1-207ENST00000472390 CHD7Q9P2D1 2997 aa22.32■■□□□ 1.16
RHBDF1-207ENST00000472390 YBX2Q9Y2T7 364 aaKnown RBP22.32■■□□□ 1.16
RHBDF1-207ENST00000472390 GOLGA8HP0CJ92 632 aa22.31■■□□□ 1.16
RHBDF1-207ENST00000472390 TOP1P11387 765 aaKnown RBP22.31■■□□□ 1.16
RHBDF1-207ENST00000472390 MCMDC2Q4G0Z9 681 aa22.31■■□□□ 1.16
RHBDF1-207ENST00000472390 B4GALNT3Q6L9W6 998 aa22.31■■□□□ 1.16
RHBDF1-207ENST00000472390 OTOP2Q7RTS6 562 aa22.31■■□□□ 1.16
RHBDF1-207ENST00000472390 MORC4Q8TE76 937 aa22.31■■□□□ 1.16
RHBDF1-207ENST00000472390 NKX2-4Q9H2Z4 354 aa22.31■■□□□ 1.16
RHBDF1-207ENST00000472390 TRMT13Q9NUP7 481 aaKnown RBP22.31■■□□□ 1.16
RHBDF1-207ENST00000472390 ZBTB47Q9UFB7 747 aaPredicted RBP22.31■■□□□ 1.16
RHBDF1-207ENST00000472390 CCDC171Q6TFL3 1326 aa22.31■■□□□ 1.16
RHBDF1-207ENST00000472390 TRIM6-TRIM34B2RNG4 842 aa22.3■■□□□ 1.16
RHBDF1-207ENST00000472390 CYP2C9P11712 490 aa22.3■■□□□ 1.16
RHBDF1-207ENST00000472390 PSRC1Q6PGN9 363 aaPredicted RBP22.3■■□□□ 1.16
RHBDF1-207ENST00000472390 RILPL2Q969X0 211 aa22.3■■□□□ 1.16
RHBDF1-207ENST00000472390 VTA1Q9NP79 307 aa22.3■■□□□ 1.16
RHBDF1-207ENST00000472390 MYL3P08590 195 aa22.29■■□□□ 1.16
RHBDF1-207ENST00000472390 MYOGP15173 224 aa22.29■■□□□ 1.16
RHBDF1-207ENST00000472390 RABGGTBP53611 331 aa22.29■■□□□ 1.16
RHBDF1-207ENST00000472390 ZNF543Q08ER8 600 aa22.29■■□□□ 1.16
RHBDF1-207ENST00000472390 ADGRE1Q14246 886 aa22.29■■□□□ 1.16
RHBDF1-207ENST00000472390 PPP4R3BQ5MIZ7 849 aa22.29■■□□□ 1.16
RHBDF1-207ENST00000472390 IQSEC1Q6DN90 963 aa22.29■■□□□ 1.16
RHBDF1-207ENST00000472390 HDAC1Q13547 482 aaPredicted RBP22.28■■□□□ 1.16
RHBDF1-207ENST00000472390 USH1GQ495M9 461 aa22.28■■□□□ 1.16
RHBDF1-207ENST00000472390 HERVK_113Q902F9 699 aa22.28■■□□□ 1.16
RHBDF1-207ENST00000472390 WDR11Q9BZH6 1224 aa22.28■■□□□ 1.16
RHBDF1-207ENST00000472390 SCN10AQ9Y5Y9 1956 aa22.28■■□□□ 1.16
RHBDF1-207ENST00000472390 DUSP28Q4G0W2 176 aa22.27■■□□□ 1.16
RHBDF1-207ENST00000472390 OR6J1Q8NGC5 347 aa22.27■■□□□ 1.16
RHBDF1-207ENST00000472390 UBA5Q9GZZ9 404 aa22.27■■□□□ 1.16
RHBDF1-207ENST00000472390 ALDH8A1Q9H2A2 487 aaPredicted RBP22.27■■□□□ 1.16
RHBDF1-207ENST00000472390 TANC1Q9C0D5 1861 aa22.26■■□□□ 1.15
RHBDF1-207ENST00000472390 CABYRO75952 493 aa22.26■■□□□ 1.15
RHBDF1-207ENST00000472390 ARIH2O95376 493 aa22.26■■□□□ 1.15
RHBDF1-207ENST00000472390 RPS6P62753 249 aaKnown RBP22.26■■□□□ 1.15
RHBDF1-207ENST00000472390 PURAQ00577 322 aaKnown RBP22.26■■□□□ 1.15
RHBDF1-207ENST00000472390 CCDC85BQ15834 202 aaPredicted RBP22.26■■□□□ 1.15
RHBDF1-207ENST00000472390 AKNAD1Q5T1N1 836 aa22.26■■□□□ 1.15
RHBDF1-207ENST00000472390 RNF207Q6ZRF8 634 aa22.26■■□□□ 1.15
RHBDF1-207ENST00000472390 TBC1D5Q92609 795 aa22.26■■□□□ 1.15
RHBDF1-207ENST00000472390 TCP11L1Q9NUJ3 509 aa22.26■■□□□ 1.15
RHBDF1-207ENST00000472390 ZMYM6O95789 1325 aa22.26■■□□□ 1.15
RHBDF1-207ENST00000472390 FGBP02675 491 aa22.25■■□□□ 1.15
RHBDF1-207ENST00000472390 SNHG28P0DPA3 235 aa22.25■■□□□ 1.15
RHBDF1-207ENST00000472390 MFSD6Q6ZSS7 791 aa22.25■■□□□ 1.15
RHBDF1-207ENST00000472390 ADD3Q9UEY8 706 aaKnown RBP22.25■■□□□ 1.15
RHBDF1-207ENST00000472390 REV3LO60673 3130 aa22.25■■□□□ 1.15
RHBDF1-207ENST00000472390 MYH6P13533 1939 aa22.24■■□□□ 1.15
RHBDF1-207ENST00000472390 ZEB2O60315 1214 aa22.24■■□□□ 1.15
RHBDF1-207ENST00000472390 SDSP20132 328 aa22.24■■□□□ 1.15
RHBDF1-207ENST00000472390 TTLL4Q14679 1199 aa22.24■■□□□ 1.15
RHBDF1-207ENST00000472390 FAM47CQ5HY64 1035 aa22.24■■□□□ 1.15
RHBDF1-207ENST00000472390 DEFB128Q7Z7B8 93 aa22.24■■□□□ 1.15
RHBDF1-207ENST00000472390 YTHDC1Q96MU7 727 aaKnown RBP22.24■■□□□ 1.15
RHBDF1-207ENST00000472390 COL20A1Q9P218 1284 aa22.24■■□□□ 1.15
RHBDF1-207ENST00000472390 Q9Y3F1 56 aa22.24■■□□□ 1.15
RHBDF1-207ENST00000472390 TNKSO95271 1327 aa22.24■■□□□ 1.15
RHBDF1-207ENST00000472390 TET1Q8NFU7 2136 aa22.24■■□□□ 1.15
RHBDF1-207ENST00000472390 PTPRSQ13332 1948 aa22.23■■□□□ 1.15
RHBDF1-207ENST00000472390 RBM47A0AV96 593 aaKnown RBP22.23■■□□□ 1.15
RHBDF1-207ENST00000472390 ZBBXA8MT70 800 aa22.23■■□□□ 1.15
RHBDF1-207ENST00000472390 IGHDP01880 384 aa22.23■■□□□ 1.15
RHBDF1-207ENST00000472390 CHMP4BP1P59074 171 aa22.23■■□□□ 1.15
RHBDF1-207ENST00000472390 PDE4DQ08499 809 aa22.23■■□□□ 1.15
RHBDF1-207ENST00000472390 IL25Q9H293 177 aa22.23■■□□□ 1.15
RHBDF1-207ENST00000472390 EDNRBP24530 442 aa22.22■■□□□ 1.15
RHBDF1-207ENST00000472390 PPP2R5BQ15173 497 aa22.22■■□□□ 1.15
RHBDF1-207ENST00000472390 NBPF20Q3BBV1 942 aa22.22■■□□□ 1.15
RHBDF1-207ENST00000472390 CWC27Q6UX04 472 aaKnown RBP22.22■■□□□ 1.15
RHBDF1-207ENST00000472390 PLEKHM2Q8IWE5 1019 aa22.22■■□□□ 1.15
RHBDF1-207ENST00000472390 GAS2L1Q99501 681 aaPredicted RBP22.22■■□□□ 1.15
RHBDF1-207ENST00000472390 B4E1Z4 1266 aa22.21■■□□□ 1.15
RHBDF1-207ENST00000472390 KDM4AO75164 1064 aa22.21■■□□□ 1.15
RHBDF1-207ENST00000472390 ARHGEF15O94989 841 aa22.21■■□□□ 1.15
RHBDF1-207ENST00000472390 IGFBP4P22692 258 aa22.21■■□□□ 1.15
RHBDF1-207ENST00000472390 CDC37Q16543 378 aaPredicted RBP22.21■■□□□ 1.15
RHBDF1-207ENST00000472390 POLR3EQ9NVU0 708 aa22.21■■□□□ 1.15
RHBDF1-207ENST00000472390 MSRAQ9UJ68 235 aa22.21■■□□□ 1.15
RHBDF1-207ENST00000472390 WDR19Q8NEZ3 1342 aa22.21■■□□□ 1.15
RHBDF1-207ENST00000472390 TRIP12Q14669 1992 aaPredicted RBP22.2■■□□□ 1.14
RHBDF1-207ENST00000472390 RAB30Q15771 203 aa22.2■■□□□ 1.14
RHBDF1-207ENST00000472390 SMC5Q8IY18 1101 aa22.2■■□□□ 1.14
RHBDF1-207ENST00000472390 MTG1Q9BT17 334 aaPredicted RBP22.2■■□□□ 1.14
RHBDF1-207ENST00000472390 KIAA1217Q5T5P2 1943 aa22.19■■□□□ 1.14
RHBDF1-207ENST00000472390 RFXAPO00287 272 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms