RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 CMTR1Q8N1G2 835 aaKnown RBP17.46■□□□□ 0.39
SNX13-205ENST00000471744 CCDC82Q8N4S0 544 aa17.46■□□□□ 0.39
SNX13-205ENST00000471744 PIBF1Q8WXW3 757 aa17.46■□□□□ 0.39
SNX13-205ENST00000471744 MPHOSPH6Q99547 160 aaKnown RBP17.46■□□□□ 0.39
SNX13-205ENST00000471744 TINF2Q9BSI4 451 aa17.46■□□□□ 0.39
SNX13-205ENST00000471744 HMX1Q9NP08 348 aaPredicted RBP17.46■□□□□ 0.39
SNX13-205ENST00000471744 FLRT1Q9NZU1 646 aa17.46■□□□□ 0.39
SNX13-205ENST00000471744 CCDC85CA6NKD9 419 aa17.45■□□□□ 0.38
SNX13-205ENST00000471744 B4DLN1 442 aa17.45■□□□□ 0.38
SNX13-205ENST00000471744 CPLX1O14810 134 aa17.45■□□□□ 0.38
SNX13-205ENST00000471744 CCL5P13501 91 aa17.45■□□□□ 0.38
SNX13-205ENST00000471744 IFNAR1P17181 557 aa17.45■□□□□ 0.38
SNX13-205ENST00000471744 MRPL12P52815 198 aaKnown RBP17.45■□□□□ 0.38
SNX13-205ENST00000471744 RPS6P62753 249 aaKnown RBP17.45■□□□□ 0.38
SNX13-205ENST00000471744 AKAP17AQ02040 695 aaKnown RBP17.45■□□□□ 0.38
SNX13-205ENST00000471744 GHRHRQ02643 423 aa17.45■□□□□ 0.38
SNX13-205ENST00000471744 TEX2Q8IWB9 1127 aa17.45■□□□□ 0.38
SNX13-205ENST00000471744 DNERQ8NFT8 737 aa17.45■□□□□ 0.38
SNX13-205ENST00000471744 TBC1D32Q96NH3 1257 aa17.45■□□□□ 0.38
SNX13-205ENST00000471744 SLKQ9H2G2 1235 aaPredicted RBP17.45■□□□□ 0.38
SNX13-205ENST00000471744 CDKL5O76039 1030 aa17.44■□□□□ 0.38
SNX13-205ENST00000471744 CALML3P27482 149 aa17.44■□□□□ 0.38
SNX13-205ENST00000471744 CCT2P78371 535 aaKnown RBP17.44■□□□□ 0.38
SNX13-205ENST00000471744 CNTN2Q02246 1040 aa17.44■□□□□ 0.38
SNX13-205ENST00000471744 CACNB2Q08289 660 aaPredicted RBP17.44■□□□□ 0.38
SNX13-205ENST00000471744 TRIM22Q8IYM9 498 aa17.44■□□□□ 0.38
SNX13-205ENST00000471744 KIF2CQ99661 725 aa17.44■□□□□ 0.38
SNX13-205ENST00000471744 RNF26Q9BY78 433 aaPredicted RBP17.44■□□□□ 0.38
SNX13-205ENST00000471744 RNF208Q9H0X6 261 aa17.44■□□□□ 0.38
SNX13-205ENST00000471744 TPCN1Q9ULQ1 816 aa17.44■□□□□ 0.38
SNX13-205ENST00000471744 CNPY2Q9Y2B0 182 aa17.44■□□□□ 0.38
SNX13-205ENST00000471744 V9GY48 417 aaPredicted RBP17.44■□□□□ 0.38
SNX13-205ENST00000471744 PRPF3O43395 683 aaKnown RBP17.43■□□□□ 0.38
SNX13-205ENST00000471744 MSCO60682 206 aa17.43■□□□□ 0.38
SNX13-205ENST00000471744 PFKFB2O60825 505 aa17.43■□□□□ 0.38
SNX13-205ENST00000471744 CFBP00751 764 aa17.43■□□□□ 0.38
SNX13-205ENST00000471744 GJB1P08034 283 aa17.43■□□□□ 0.38
SNX13-205ENST00000471744 CYP2C19P33261 490 aa17.43■□□□□ 0.38
SNX13-205ENST00000471744 HSD17B4P51659 736 aa17.43■□□□□ 0.38
SNX13-205ENST00000471744 MTFR1Q15390 333 aa17.43■□□□□ 0.38
SNX13-205ENST00000471744 NTRK3Q16288 839 aa17.43■□□□□ 0.38
SNX13-205ENST00000471744 PPP1R18Q6NYC8 613 aa17.43■□□□□ 0.38
SNX13-205ENST00000471744 SLC30A10Q6XR72 485 aa17.43■□□□□ 0.38
SNX13-205ENST00000471744 FGD4Q96M96 766 aa17.43■□□□□ 0.38
SNX13-205ENST00000471744 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.43■□□□□ 0.38
SNX13-205ENST00000471744 UNC93B1Q9H1C4 597 aa17.43■□□□□ 0.38
SNX13-205ENST00000471744 HTTP42858 3142 aa17.43■□□□□ 0.38
SNX13-205ENST00000471744 SOWAHBA6NEL2 793 aa17.42■□□□□ 0.38
SNX13-205ENST00000471744 GCOM1H8Y6P7 765 aaPredicted RBP17.42■□□□□ 0.38
SNX13-205ENST00000471744 ST18O60284 1047 aa17.42■□□□□ 0.38
SNX13-205ENST00000471744 POLR2MP0CAP2 368 aa17.42■□□□□ 0.38
SNX13-205ENST00000471744 CYBAP13498 195 aa17.42■□□□□ 0.38
SNX13-205ENST00000471744 ALDH5A1P51649 535 aaPredicted RBP17.42■□□□□ 0.38
SNX13-205ENST00000471744 TRIM32Q13049 653 aa17.42■□□□□ 0.38
SNX13-205ENST00000471744 STK3Q13188 491 aa17.42■□□□□ 0.38
SNX13-205ENST00000471744 ARMCX2Q7L311 632 aa17.42■□□□□ 0.38
SNX13-205ENST00000471744 HEATR3Q7Z4Q2 680 aa17.42■□□□□ 0.38
SNX13-205ENST00000471744 SYTL5Q8TDW5 730 aaPredicted RBP17.42■□□□□ 0.38
SNX13-205ENST00000471744 CUL5Q93034 780 aa17.42■□□□□ 0.38
SNX13-205ENST00000471744 LARP6Q9BRS8 491 aaKnown RBP17.42■□□□□ 0.38
SNX13-205ENST00000471744 GLT8D2Q9H1C3 349 aa17.42■□□□□ 0.38
SNX13-205ENST00000471744 ABHD16BQ9H3Z7 469 aa17.42■□□□□ 0.38
SNX13-205ENST00000471744 NCOA5Q9HCD5 579 aaKnown RBP17.42■□□□□ 0.38
SNX13-205ENST00000471744 PAK6Q9NQU5 681 aaPredicted RBP17.42■□□□□ 0.38
SNX13-205ENST00000471744 OPLAHO14841 1288 aa17.41■□□□□ 0.38
SNX13-205ENST00000471744 SCG2P13521 617 aa17.41■□□□□ 0.38
SNX13-205ENST00000471744 SSRP1Q08945 709 aaKnown RBP17.41■□□□□ 0.38
SNX13-205ENST00000471744 PFKFB3Q16875 520 aaPredicted RBP17.41■□□□□ 0.38
SNX13-205ENST00000471744 MORC4Q8TE76 937 aa17.41■□□□□ 0.38
SNX13-205ENST00000471744 NSUN6Q8TEA1 469 aaKnown RBP17.41■□□□□ 0.38
SNX13-205ENST00000471744 CCDC12Q8WUD4 166 aaPredicted RBP17.41■□□□□ 0.38
SNX13-205ENST00000471744 ZSCAN31Q96LW9 406 aaPredicted RBP17.41■□□□□ 0.38
SNX13-205ENST00000471744 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.41■□□□□ 0.38
SNX13-205ENST00000471744 LIMCH1Q9UPQ0 1083 aa17.41■□□□□ 0.38
SNX13-205ENST00000471744 hCG_1642624A0A1W2PR95 340 aa17.4■□□□□ 0.38
SNX13-205ENST00000471744 PIK3CDO00329 1044 aa17.4■□□□□ 0.38
SNX13-205ENST00000471744 SEPT4O43236 478 aa17.4■□□□□ 0.38
SNX13-205ENST00000471744 MYCP01106 439 aaPredicted RBP17.4■□□□□ 0.38
SNX13-205ENST00000471744 NAPAP54920 295 aa17.4■□□□□ 0.38
SNX13-205ENST00000471744 SCRN1Q12765 414 aa17.4■□□□□ 0.38
SNX13-205ENST00000471744 WWC2Q6AWC2 1192 aa17.4■□□□□ 0.38
SNX13-205ENST00000471744 TBC1D5Q92609 795 aa17.4■□□□□ 0.38
SNX13-205ENST00000471744 IWS1Q96ST2 819 aa17.4■□□□□ 0.38
SNX13-205ENST00000471744 SLC26A6Q9BXS9 759 aa17.4■□□□□ 0.38
SNX13-205ENST00000471744 PSTPIP2Q9H939 334 aa17.4■□□□□ 0.38
SNX13-205ENST00000471744 BARHL2Q9NY43 387 aa17.4■□□□□ 0.38
SNX13-205ENST00000471744 FRMPD3Q5JV73 1810 aa17.4■□□□□ 0.38
SNX13-205ENST00000471744 DEXIO95424 95 aa17.39■□□□□ 0.37
SNX13-205ENST00000471744 SNAI1O95863 264 aaPredicted RBP17.39■□□□□ 0.37
SNX13-205ENST00000471744 CNGA1P29973 690 aa17.39■□□□□ 0.37
SNX13-205ENST00000471744 CCND3P30281 292 aaPredicted RBP17.39■□□□□ 0.37
SNX13-205ENST00000471744 GJA8P48165 433 aa17.39■□□□□ 0.37
SNX13-205ENST00000471744 ME3Q16798 604 aa17.39■□□□□ 0.37
SNX13-205ENST00000471744 NOL8Q76FK4 1167 aaKnown RBP17.39■□□□□ 0.37
SNX13-205ENST00000471744 FAM177A1Q8N128 213 aaPredicted RBP17.39■□□□□ 0.37
SNX13-205ENST00000471744 SMARCC2Q8TAQ2 1214 aa17.39■□□□□ 0.37
SNX13-205ENST00000471744 GPKOWQ92917 476 aaPredicted RBP eCLIP17.39■□□□□ 0.37
SNX13-205ENST00000471744 PHKBQ93100 1093 aa17.39■□□□□ 0.37
SNX13-205ENST00000471744 GTF3C6Q969F1 213 aa17.39■□□□□ 0.37
SNX13-205ENST00000471744 RMDN3Q96TC7 470 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms