RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 GBP3Q9H0R5 595 aa3.46□□□□□ -1.86
COMMD3-209ENST00000471350 BCAS3Q9H6U6 928 aa3.46□□□□□ -1.86
COMMD3-209ENST00000471350 SPATA6Q9NWH7 488 aaPredicted RBP3.46□□□□□ -1.86
COMMD3-209ENST00000471350 SUSD2Q9UGT4 822 aa3.46□□□□□ -1.86
COMMD3-209ENST00000471350 DIS3Q9Y2L1 958 aaKnown RBP3.46□□□□□ -1.86
COMMD3-209ENST00000471350 ZNF16P17020 682 aaPredicted RBP3.45□□□□□ -1.86
COMMD3-209ENST00000471350 L1CAMP32004 1257 aa3.45□□□□□ -1.86
COMMD3-209ENST00000471350 PLP2Q04941 152 aa3.45□□□□□ -1.86
COMMD3-209ENST00000471350 NT5DC1Q5TFE4 455 aa3.45□□□□□ -1.86
COMMD3-209ENST00000471350 EEF1DP3Q658K8 133 aa3.45□□□□□ -1.86
COMMD3-209ENST00000471350 FERMT3Q86UX7 667 aa3.45□□□□□ -1.86
COMMD3-209ENST00000471350 LSRQ86X29 649 aaPredicted RBP3.45□□□□□ -1.86
COMMD3-209ENST00000471350 ZNF654Q8IZM8 581 aa3.45□□□□□ -1.86
COMMD3-209ENST00000471350 ZNF513Q8N8E2 541 aaPredicted RBP3.45□□□□□ -1.86
COMMD3-209ENST00000471350 BORCS6Q96GS4 357 aa3.45□□□□□ -1.86
COMMD3-209ENST00000471350 MTA3Q9BTC8 594 aa3.45□□□□□ -1.86
COMMD3-209ENST00000471350 BACH2Q9BYV9 841 aa3.45□□□□□ -1.86
COMMD3-209ENST00000471350 NOL6Q9H6R4 1146 aaKnown RBP3.45□□□□□ -1.86
COMMD3-209ENST00000471350 RXFP1Q9HBX9 757 aa3.45□□□□□ -1.86
COMMD3-209ENST00000471350 CNOT11Q9UKZ1 510 aaKnown RBP3.45□□□□□ -1.86
COMMD3-209ENST00000471350 ZNF214Q9UL59 606 aaPredicted RBP3.45□□□□□ -1.86
COMMD3-209ENST00000471350 PMF1-BGLAPU3KQ54 211 aa3.45□□□□□ -1.86
COMMD3-209ENST00000471350 TRBV23OR9-2A0A075B6M9 112 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 F8W031 263 aaPredicted RBP3.44□□□□□ -1.86
COMMD3-209ENST00000471350 PPM1BO75688 479 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 CD3EP07766 207 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 TNFRSF1AP19438 455 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 PMLP29590 882 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 EIF6P56537 245 aaKnown RBP3.44□□□□□ -1.86
COMMD3-209ENST00000471350 RACK1P63244 317 aaKnown RBP3.44□□□□□ -1.86
COMMD3-209ENST00000471350 FANCCQ00597 558 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 ZXDCQ2QGD7 858 aaPredicted RBP3.44□□□□□ -1.86
COMMD3-209ENST00000471350 GNPTABQ3T906 1256 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 HEATR6Q6AI08 1181 aaKnown RBP3.44□□□□□ -1.86
COMMD3-209ENST00000471350 RCSD1Q6JBY9 416 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 ADAT2Q7Z6V5 191 aaKnown RBP3.44□□□□□ -1.86
COMMD3-209ENST00000471350 CARFQ8N187 725 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 OR6P1Q8NGX9 317 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 TSPAN17Q96FV3 270 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 ZDHHC15Q96MV8 337 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 SYT3Q9BQG1 590 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 SSBP3Q9BWW4 388 aaPredicted RBP3.44□□□□□ -1.86
COMMD3-209ENST00000471350 LNPKQ9C0E8 428 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 KLHL25Q9H0H3 589 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 TMPRSS5Q9H3S3 457 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 PHAXQ9H814 394 aaKnown RBP3.44□□□□□ -1.86
COMMD3-209ENST00000471350 FAM86C1Q9NVL1 165 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 WHRNQ9P202 907 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 NUDT5Q9UKK9 219 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 PPT2Q9UMR5 302 aa3.44□□□□□ -1.86
COMMD3-209ENST00000471350 SCAMP3O14828 347 aaKnown RBP3.43□□□□□ -1.86
COMMD3-209ENST00000471350 AURKAO14965 403 aa3.43□□□□□ -1.86
COMMD3-209ENST00000471350 ITGB3P05106 788 aa3.43□□□□□ -1.86
COMMD3-209ENST00000471350 INSRRP14616 1297 aa3.43□□□□□ -1.86
COMMD3-209ENST00000471350 SEPHS1P49903 392 aa3.43□□□□□ -1.86
COMMD3-209ENST00000471350 ADAM17P78536 824 aa3.43□□□□□ -1.86
COMMD3-209ENST00000471350 PPP2R5DQ14738 602 aa3.43□□□□□ -1.86
COMMD3-209ENST00000471350 ZNF394Q53GI3 561 aa3.43□□□□□ -1.86
COMMD3-209ENST00000471350 ZNF761Q86XN6 746 aaPredicted RBP3.43□□□□□ -1.86
COMMD3-209ENST00000471350 LINC00482Q8N8I6 264 aa3.43□□□□□ -1.86
COMMD3-209ENST00000471350 USP33Q8TEY7 942 aa3.43□□□□□ -1.86
COMMD3-209ENST00000471350 CPA5Q8WXQ8 436 aa3.43□□□□□ -1.86
COMMD3-209ENST00000471350 KLHL6Q8WZ60 621 aa3.43□□□□□ -1.86
COMMD3-209ENST00000471350 MYRFQ9Y2G1 1151 aa3.43□□□□□ -1.86
COMMD3-209ENST00000471350 PCDHGB7Q9Y5F8 929 aa3.43□□□□□ -1.86
COMMD3-209ENST00000471350 MATN3O15232 486 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 NAT2P11245 290 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 NCAM1P13591 858 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 MAGEA10P43363 369 aaPredicted RBP3.42□□□□□ -1.86
COMMD3-209ENST00000471350 SLC7A5Q01650 507 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 CYP4F3Q08477 520 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 TRIM26Q12899 539 aaPredicted RBP3.42□□□□□ -1.86
COMMD3-209ENST00000471350 SLC9A5Q14940 896 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 MBLAC2Q68D91 279 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 CRACR2BQ8N4Y2 399 aaPredicted RBP3.42□□□□□ -1.86
COMMD3-209ENST00000471350 LZTR1Q8N653 840 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 C19orf47Q8N9M1 422 aaKnown RBP3.42□□□□□ -1.86
COMMD3-209ENST00000471350 SMARCC2Q8TAQ2 1214 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 CPLX3Q8WVH0 158 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 ALG3Q92685 438 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 PEX11GQ96HA9 241 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 HAUS7Q99871 368 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 USP40Q9NVE5 1235 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 DDX41Q9UJV9 622 aaKnown RBP3.42□□□□□ -1.86
COMMD3-209ENST00000471350 SUGT1Q9Y2Z0 365 aa3.42□□□□□ -1.86
COMMD3-209ENST00000471350 C1QTNF3-AMACRE9PGA6 284 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 K7ESM1 405 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 ZBTB7AO95365 584 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 C8BP07358 591 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 PAMP19021 973 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 CNR2P34972 360 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 AMPD2Q01433 879 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 CACNB2Q08289 660 aaPredicted RBP3.41□□□□□ -1.86
COMMD3-209ENST00000471350 PAK2Q13177 524 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 PUM1Q14671 1186 aaKnown RBP eCLIP3.41□□□□□ -1.86
COMMD3-209ENST00000471350 PPP2R5EQ16537 467 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 PRR31Q5SQ13 230 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 UBXN11Q5T124 520 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 POMZP3Q6PJE2 187 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 NETO2Q8NC67 525 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms