RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TAAR1Q96RJ0 339 aa11.37□□□□□ -0.59
SF3A1-207ENST00000471342 KATNBL1Q9H079 304 aa11.37□□□□□ -0.59
SF3A1-207ENST00000471342 PSTPIP2Q9H939 334 aa11.37□□□□□ -0.59
SF3A1-207ENST00000471342 WBP1LQ9NX94 342 aa11.37□□□□□ -0.59
SF3A1-207ENST00000471342 BIN2Q9UBW5 565 aaPredicted RBP11.37□□□□□ -0.59
SF3A1-207ENST00000471342 IGLV3-22A0A075B6J6 115 aa11.36□□□□□ -0.59
SF3A1-207ENST00000471342 MRPS9P82933 396 aaKnown RBP11.36□□□□□ -0.59
SF3A1-207ENST00000471342 CNTN2Q02246 1040 aa11.36□□□□□ -0.59
SF3A1-207ENST00000471342 SREBF2Q12772 1141 aa11.36□□□□□ -0.59
SF3A1-207ENST00000471342 IKQ13123 557 aaPredicted RBP11.36□□□□□ -0.59
SF3A1-207ENST00000471342 PABPC4Q13310 644 aaKnown RBP eCLIP11.36□□□□□ -0.59
SF3A1-207ENST00000471342 TAF1CQ15572 869 aaPredicted RBP11.36□□□□□ -0.59
SF3A1-207ENST00000471342 IL17AQ16552 155 aa11.36□□□□□ -0.59
SF3A1-207ENST00000471342 ZNF792Q3KQV3 632 aa11.36□□□□□ -0.59
SF3A1-207ENST00000471342 GALNT17Q6IS24 598 aa11.36□□□□□ -0.59
SF3A1-207ENST00000471342 SAMD1Q6SPF0 538 aaPredicted RBP11.36□□□□□ -0.59
SF3A1-207ENST00000471342 NOSTRINQ8IVI9 506 aa11.36□□□□□ -0.59
SF3A1-207ENST00000471342 JMYQ8N9B5 988 aa11.36□□□□□ -0.59
SF3A1-207ENST00000471342 CHST13Q8NET6 341 aa11.36□□□□□ -0.59
SF3A1-207ENST00000471342 TNPO1Q92973 898 aaKnown RBP11.36□□□□□ -0.59
SF3A1-207ENST00000471342 PARK7Q99497 189 aaKnown RBP11.36□□□□□ -0.59
SF3A1-207ENST00000471342 MAF1Q9H063 256 aa11.36□□□□□ -0.59
SF3A1-207ENST00000471342 CHMP5Q9NZZ3 219 aa11.36□□□□□ -0.59
SF3A1-207ENST00000471342 MRPL11Q9Y3B7 192 aaKnown RBP11.36□□□□□ -0.59
SF3A1-207ENST00000471342 MRVI1Q9Y6F6 885 aa11.36□□□□□ -0.59
SF3A1-207ENST00000471342 PLXNB2O15031 1838 aa11.36□□□□□ -0.59
SF3A1-207ENST00000471342 PTPREP23469 700 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 CIITAP33076 1130 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 SREBF1P36956 1147 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 NLRP5P59047 1200 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 GRM1Q13255 1194 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 SEMA3FQ13275 785 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 GRB14Q14449 540 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 FOXD4L5Q5VV16 416 aaPredicted RBP11.35□□□□□ -0.59
SF3A1-207ENST00000471342 MYSM1Q5VVJ2 828 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 JAKMIP3Q5VZ66 844 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 TEX2Q8IWB9 1127 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 REM2Q8IYK8 340 aaPredicted RBP11.35□□□□□ -0.59
SF3A1-207ENST00000471342 SAMD3Q8N6K7 520 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 FAM184AQ8NB25 1140 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 CYP2W1Q8TAV3 490 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 FOXD4L4Q8WXT5 416 aaPredicted RBP11.35□□□□□ -0.59
SF3A1-207ENST00000471342 USP28Q96RU2 1077 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 PAGR1Q9BTK6 254 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.35□□□□□ -0.59
SF3A1-207ENST00000471342 HOMER2Q9NSB8 354 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 SEC63Q9UGP8 760 aaKnown RBP11.35□□□□□ -0.59
SF3A1-207ENST00000471342 PNMA3Q9UL41 463 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 PCDHB6Q9Y5E3 794 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 ZSWIM8A7E2V4 1837 aa11.35□□□□□ -0.59
SF3A1-207ENST00000471342 CYP3A7-CYP3A51PA0A087WV96 503 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 SLC25A27O95847 323 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 CYP3A4P08684 503 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 HOXC6P09630 235 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 PDCP20941 246 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 CYP3A7P24462 503 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 KRT2P35908 639 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 ADCY7P51828 1080 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 MAMDC4Q6UXC1 1216 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 GPR142Q7Z601 462 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 NPLOC4Q8TAT6 608 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 GTF3C2Q8WUA4 911 aaPredicted RBP11.34□□□□□ -0.59
SF3A1-207ENST00000471342 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 TMEM60Q9H2L4 133 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 BCAS3Q9H6U6 928 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 ACAD9Q9H845 621 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 MAP3K20Q9NYL2 800 aaKnown RBP11.34□□□□□ -0.59
SF3A1-207ENST00000471342 FLRT1Q9NZU1 646 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 ISY1Q9ULR0 285 aaKnown RBP11.34□□□□□ -0.59
SF3A1-207ENST00000471342 CLIC4Q9Y696 253 aa11.34□□□□□ -0.59
SF3A1-207ENST00000471342 MORC2Q9Y6X9 1032 aaPredicted RBP11.34□□□□□ -0.59
SF3A1-207ENST00000471342 VPS37CA5D8V6 355 aaPredicted RBP11.33□□□□□ -0.6
SF3A1-207ENST00000471342 FAM86B1E9PN63 330 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 TRPA1O75762 1119 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 PGK2P07205 417 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 FAM86B2P0C5J1 330 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 ITGB5P18084 799 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 CALML3P27482 149 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 AKAP17AQ02040 695 aaKnown RBP11.33□□□□□ -0.6
SF3A1-207ENST00000471342 DNM1Q05193 864 aaKnown RBP11.33□□□□□ -0.6
SF3A1-207ENST00000471342 GRIN1Q05586 938 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 TMEM63BQ5T3F8 832 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 B3GNT9Q6UX72 402 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 PIK3AP1Q6ZUJ8 805 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 ABRAQ8N0Z2 381 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 CCDC148Q8NFR7 591 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 TBCKQ8TEA7 893 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 HAS1Q92839 578 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
SF3A1-207ENST00000471342 MTMR9Q96QG7 549 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 PDCD2LQ9BRP1 358 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 ANO3Q9BYT9 981 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 MROH8Q9H579 483 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 ZFYVE28Q9HCC9 887 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 C6orf50Q9HD87 102 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 PXMP2Q9NR77 195 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 TELO2Q9Y4R8 837 aa11.33□□□□□ -0.6
SF3A1-207ENST00000471342 GCOM1H8Y6P7 765 aaPredicted RBP11.32□□□□□ -0.6
SF3A1-207ENST00000471342 GPR25O00155 361 aa11.32□□□□□ -0.6
SF3A1-207ENST00000471342 SLC37A4O43826 429 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms