RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 TBC1D5Q92609 795 aa22.86■■□□□ 1.25
HDAC7-220ENST00000471235 SHISA4Q96DD7 197 aa22.86■■□□□ 1.25
HDAC7-220ENST00000471235 C22orf23Q9BZE7 217 aa22.86■■□□□ 1.25
HDAC7-220ENST00000471235 ALDH8A1Q9H2A2 487 aaPredicted RBP22.86■■□□□ 1.25
HDAC7-220ENST00000471235 hCG_1642624A0A1W2PR95 340 aa22.85■■□□□ 1.25
HDAC7-220ENST00000471235 ADD1P35611 737 aaKnown RBP22.85■■□□□ 1.25
HDAC7-220ENST00000471235 PPP2R5BQ15173 497 aa22.85■■□□□ 1.25
HDAC7-220ENST00000471235 PRAMEF19Q5SWL8 479 aa22.85■■□□□ 1.25
HDAC7-220ENST00000471235 ARMCX2Q7L311 632 aa22.85■■□□□ 1.25
HDAC7-220ENST00000471235 DEFB118Q96PH6 123 aa22.85■■□□□ 1.25
HDAC7-220ENST00000471235 MAF1Q9H063 256 aa22.85■■□□□ 1.25
HDAC7-220ENST00000471235 CCDC196A0A1B0GTZ2 297 aa22.84■■□□□ 1.25
HDAC7-220ENST00000471235 GJA8P48165 433 aa22.84■■□□□ 1.25
HDAC7-220ENST00000471235 RBM25P49756 843 aaKnown RBP22.84■■□□□ 1.25
HDAC7-220ENST00000471235 ALDH5A1P51649 535 aaPredicted RBP22.84■■□□□ 1.25
HDAC7-220ENST00000471235 AK2P54819 239 aa22.84■■□□□ 1.25
HDAC7-220ENST00000471235 GHRHRQ02643 423 aa22.84■■□□□ 1.25
HDAC7-220ENST00000471235 MCF2L2Q86YR7 1114 aa22.84■■□□□ 1.25
HDAC7-220ENST00000471235 U2AF1L4Q8WU68 220 aaKnown RBP22.84■■□□□ 1.25
HDAC7-220ENST00000471235 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.84■■□□□ 1.25
HDAC7-220ENST00000471235 NRBP1Q9UHY1 535 aa22.84■■□□□ 1.25
HDAC7-220ENST00000471235 DDX49Q9Y6V7 483 aaKnown RBP22.84■■□□□ 1.25
HDAC7-220ENST00000471235 ALPK3Q96L96 1907 aa22.83■■□□□ 1.25
HDAC7-220ENST00000471235 SNAI1O95863 264 aaPredicted RBP22.83■■□□□ 1.25
HDAC7-220ENST00000471235 EN2P19622 333 aaPredicted RBP22.83■■□□□ 1.25
HDAC7-220ENST00000471235 HSD17B4P51659 736 aa22.83■■□□□ 1.25
HDAC7-220ENST00000471235 CCT2P78371 535 aaKnown RBP22.83■■□□□ 1.25
HDAC7-220ENST00000471235 SYTL5Q8TDW5 730 aaPredicted RBP22.83■■□□□ 1.25
HDAC7-220ENST00000471235 ZNF274Q96GC6 653 aaPredicted RBP22.83■■□□□ 1.25
HDAC7-220ENST00000471235 KIF2CQ99661 725 aa22.83■■□□□ 1.25
HDAC7-220ENST00000471235 NCOA5Q9HCD5 579 aaKnown RBP22.83■■□□□ 1.25
HDAC7-220ENST00000471235 COL20A1Q9P218 1284 aa22.83■■□□□ 1.25
HDAC7-220ENST00000471235 ASB14A6NK59 587 aa22.82■■□□□ 1.24
HDAC7-220ENST00000471235 CFBP00751 764 aa22.82■■□□□ 1.24
HDAC7-220ENST00000471235 CNGA1P29973 690 aa22.82■■□□□ 1.24
HDAC7-220ENST00000471235 GPKOWQ92917 476 aaPredicted RBP eCLIP22.82■■□□□ 1.24
HDAC7-220ENST00000471235 CRISPLD2Q9H0B8 497 aa22.82■■□□□ 1.24
HDAC7-220ENST00000471235 ADD3Q9UEY8 706 aaKnown RBP22.82■■□□□ 1.24
HDAC7-220ENST00000471235 TPCN1Q9ULQ1 816 aa22.82■■□□□ 1.24
HDAC7-220ENST00000471235 CNPY2Q9Y2B0 182 aa22.82■■□□□ 1.24
HDAC7-220ENST00000471235 SGPL1O95470 568 aa22.81■■□□□ 1.24
HDAC7-220ENST00000471235 ZNF865P0CJ78 1059 aaPredicted RBP22.81■■□□□ 1.24
HDAC7-220ENST00000471235 NEK4P51957 841 aa22.81■■□□□ 1.24
HDAC7-220ENST00000471235 STK3Q13188 491 aa22.81■■□□□ 1.24
HDAC7-220ENST00000471235 ANKRD1Q15327 319 aa22.81■■□□□ 1.24
HDAC7-220ENST00000471235 MORC4Q8TE76 937 aa22.81■■□□□ 1.24
HDAC7-220ENST00000471235 KATNBL1Q9H079 304 aa22.81■■□□□ 1.24
HDAC7-220ENST00000471235 UPF2Q9HAU5 1272 aaKnown RBP22.81■■□□□ 1.24
HDAC7-220ENST00000471235 SEPT4O43236 478 aa22.8■■□□□ 1.24
HDAC7-220ENST00000471235 NTRK3Q16288 839 aa22.8■■□□□ 1.24
HDAC7-220ENST00000471235 WWC2Q6AWC2 1192 aa22.8■■□□□ 1.24
HDAC7-220ENST00000471235 HEATR3Q7Z4Q2 680 aa22.8■■□□□ 1.24
HDAC7-220ENST00000471235 DNERQ8NFT8 737 aa22.8■■□□□ 1.24
HDAC7-220ENST00000471235 DDX20Q9UHI6 824 aaKnown RBP22.8■■□□□ 1.24
HDAC7-220ENST00000471235 ZHX1Q9UKY1 873 aaPredicted RBP22.8■■□□□ 1.24
HDAC7-220ENST00000471235 V9GY48 417 aaPredicted RBP22.8■■□□□ 1.24
HDAC7-220ENST00000471235 MYH7BA7E2Y1 1941 aa22.8■■□□□ 1.24
HDAC7-220ENST00000471235 LOC102724159A0A0B4J2E5 919 aa22.79■■□□□ 1.24
HDAC7-220ENST00000471235 HOXA13P31271 388 aaPredicted RBP22.79■■□□□ 1.24
HDAC7-220ENST00000471235 PWP2Q15269 919 aaKnown RBP22.79■■□□□ 1.24
HDAC7-220ENST00000471235 LHX8Q68G74 356 aa22.79■■□□□ 1.24
HDAC7-220ENST00000471235 NOL8Q76FK4 1167 aaKnown RBP22.79■■□□□ 1.24
HDAC7-220ENST00000471235 SAMD3Q8N6K7 520 aa22.79■■□□□ 1.24
HDAC7-220ENST00000471235 PHKBQ93100 1093 aa22.79■■□□□ 1.24
HDAC7-220ENST00000471235 TAAR1Q96RJ0 339 aa22.79■■□□□ 1.24
HDAC7-220ENST00000471235 ABHD16BQ9H3Z7 469 aa22.79■■□□□ 1.24
HDAC7-220ENST00000471235 DOCK5Q9H7D0 1870 aa22.79■■□□□ 1.24
HDAC7-220ENST00000471235 GCOM1H8Y6P7 765 aaPredicted RBP22.78■■□□□ 1.24
HDAC7-220ENST00000471235 MSCO60682 206 aa22.78■■□□□ 1.24
HDAC7-220ENST00000471235 LARGE1O95461 756 aa22.78■■□□□ 1.24
HDAC7-220ENST00000471235 POLR2MP0CAP2 368 aa22.78■■□□□ 1.24
HDAC7-220ENST00000471235 IFNAR1P17181 557 aa22.78■■□□□ 1.24
HDAC7-220ENST00000471235 EDNRBP24530 442 aa22.78■■□□□ 1.24
HDAC7-220ENST00000471235 ACVR2BQ13705 512 aa22.78■■□□□ 1.24
HDAC7-220ENST00000471235 BACH2Q9BYV9 841 aa22.78■■□□□ 1.24
HDAC7-220ENST00000471235 MAP3K20Q9NYL2 800 aaKnown RBP22.78■■□□□ 1.24
HDAC7-220ENST00000471235 PFKFB2O60825 505 aa22.77■■□□□ 1.24
HDAC7-220ENST00000471235 AKR1A1P14550 325 aa22.77■■□□□ 1.24
HDAC7-220ENST00000471235 RGS19P49795 217 aa22.77■■□□□ 1.24
HDAC7-220ENST00000471235 SCRN1Q12765 414 aa22.77■■□□□ 1.24
HDAC7-220ENST00000471235 PFKFB3Q16875 520 aaPredicted RBP22.77■■□□□ 1.24
HDAC7-220ENST00000471235 ANO1Q5XXA6 986 aa22.77■■□□□ 1.24
HDAC7-220ENST00000471235 TYW1BQ6NUM6 668 aa22.77■■□□□ 1.24
HDAC7-220ENST00000471235 FBXO16Q8IX29 292 aaPredicted RBP22.77■■□□□ 1.24
HDAC7-220ENST00000471235 TBC1D32Q96NH3 1257 aa22.77■■□□□ 1.24
HDAC7-220ENST00000471235 RNF26Q9BY78 433 aaPredicted RBP22.77■■□□□ 1.24
HDAC7-220ENST00000471235 OGDHLQ9ULD0 1010 aa22.77■■□□□ 1.24
HDAC7-220ENST00000471235 hCG_1984214I3L0E3 225 aa22.76■■□□□ 1.23
HDAC7-220ENST00000471235 STXBP3O00186 592 aa22.76■■□□□ 1.23
HDAC7-220ENST00000471235 PRPF3O43395 683 aaKnown RBP22.76■■□□□ 1.23
HDAC7-220ENST00000471235 PPFIA3O75145 1194 aa22.76■■□□□ 1.23
HDAC7-220ENST00000471235 TFRCP02786 760 aaKnown RBP22.76■■□□□ 1.23
HDAC7-220ENST00000471235 SCG2P13521 617 aa22.76■■□□□ 1.23
HDAC7-220ENST00000471235 PPP1R18Q6NYC8 613 aa22.76■■□□□ 1.23
HDAC7-220ENST00000471235 ZNF713Q8N859 430 aaPredicted RBP22.76■■□□□ 1.23
HDAC7-220ENST00000471235 NSUN6Q8TEA1 469 aaKnown RBP22.76■■□□□ 1.23
HDAC7-220ENST00000471235 LENG1Q96BZ8 264 aaPredicted RBP22.76■■□□□ 1.23
HDAC7-220ENST00000471235 RMDN3Q96TC7 470 aa22.76■■□□□ 1.23
HDAC7-220ENST00000471235 SLC26A6Q9BXS9 759 aa22.76■■□□□ 1.23
HDAC7-220ENST00000471235 SLKQ9H2G2 1235 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms