RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 STXBP5LQ9Y2K9 1186 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 COL6A3P12111 3177 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 MYH8P13535 1937 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 PNMA6FA0A0J9YX94 578 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 CYTH3O43739 400 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 FDX1P10109 184 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 SLC1A4P43007 532 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 GSE1Q14687 1217 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 SEPT2Q15019 361 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 NPY5RQ15761 445 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 CCDC183Q5T5S1 534 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 ADALQ6DHV7 355 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 FAM160B2Q86V87 743 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 STAG2Q8N3U4 1231 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 DEFB123Q8N688 67 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 GPT2Q8TD30 523 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 TNFRSF25Q93038 417 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 USP28Q96RU2 1077 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 UBE2OQ9C0C9 1292 aaKnown RBP10.46□□□□□ -0.73
PTPRE-207ENST00000471218 C6orf50Q9HD87 102 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 PCDHA4Q9UN74 947 aa10.46□□□□□ -0.73
PTPRE-207ENST00000471218 ZSWIM8A7E2V4 1837 aa10.46□□□□□ -0.74
PTPRE-207ENST00000471218 FAM237AA0A1B0GTK4 181 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 F5H6K3 240 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 STXBP3O00186 592 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 LAD1O00515 517 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 ZBTB5O15062 677 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 SPTLC2O15270 562 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 CTAGE5O15320 804 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 PRKAR2AP13861 404 aaKnown RBP10.45□□□□□ -0.74
PTPRE-207ENST00000471218 CYP2B6P20813 491 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 USP14P54578 494 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 NLRP5P59047 1200 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 HERVK_113P62684 666 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 GUCY1B3Q02153 619 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 KLRC3Q07444 240 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 STK38Q15208 465 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 MAP3K21Q5TCX8 1036 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 MFSD14CQ5VZR4 134 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 SLFN13Q68D06 897 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 USP17L2Q6R6M4 530 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 KRT25Q7Z3Z0 450 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 SIAH1Q8IUQ4 282 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 LRRC47Q8N1G4 583 aaKnown RBP10.45□□□□□ -0.74
PTPRE-207ENST00000471218 ZNF579Q8NAF0 562 aaKnown RBP10.45□□□□□ -0.74
PTPRE-207ENST00000471218 CHURC1Q8WUH1 139 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 AIFM3Q96NN9 605 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 NAP1L4Q99733 375 aaKnown RBP10.45□□□□□ -0.74
PTPRE-207ENST00000471218 LBHD1Q9BQE6 289 aaPredicted RBP10.45□□□□□ -0.74
PTPRE-207ENST00000471218 KIAA1683Q9H0B3 1180 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 VCPKMTQ9H867 229 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 VPS54Q9P1Q0 977 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 PRKAG2Q9UGJ0 569 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 CUL9Q8IWT3 2517 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 DOCK3Q8IZD9 2030 aa10.45□□□□□ -0.74
PTPRE-207ENST00000471218 DOCK1Q14185 1865 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 BTBD18B2RXH4 712 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 KIF28PB7ZC32 967 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 M0R2N6 131 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 NDUFB10O96000 172 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 BMP3P12645 472 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 CMA1P23946 247 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 MTMR2Q13614 643 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 SF3A1Q15459 793 aaKnown RBP10.44□□□□□ -0.74
PTPRE-207ENST00000471218 CCDC96Q2M329 555 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 ARL6IP4Q66PJ3 421 aaKnown RBP10.44□□□□□ -0.74
PTPRE-207ENST00000471218 WWC2Q6AWC2 1192 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 FAM109BQ6ICB4 259 aaPredicted RBP10.44□□□□□ -0.74
PTPRE-207ENST00000471218 CCDC73Q6ZRK6 1079 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 PLEKHH3Q7Z736 793 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 ELOA2Q8IYF1 753 aaPredicted RBP10.44□□□□□ -0.74
PTPRE-207ENST00000471218 BLIDQ8IZY5 108 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 CCDC82Q8N4S0 544 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 SAMD3Q8N6K7 520 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 FERMT2Q96AC1 680 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 P2RX7Q99572 595 aaKnown RBP10.44□□□□□ -0.74
PTPRE-207ENST00000471218 PYM1Q9BRP8 204 aaKnown RBP10.44□□□□□ -0.74
PTPRE-207ENST00000471218 RABGAP1Q9Y3P9 1069 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 IVNS1ABPQ9Y6Y0 642 aa10.44□□□□□ -0.74
PTPRE-207ENST00000471218 USP17L15C9J2P7 530 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 USP17L13C9JLJ4 530 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 USP17L11C9JVI0 530 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 USP17L18D6R9N7 530 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 USP17L22D6RA61 530 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 USP17L17D6RBQ6 530 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 USP17L19D6RCP7 530 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 USP17L20D6RJB6 530 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 WDR46O15213 610 aaKnown RBP10.43□□□□□ -0.74
PTPRE-207ENST00000471218 CUTAO60888 179 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 GDF11O95390 407 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 CAVIN2O95810 425 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 MAGEA10P43363 369 aaPredicted RBP10.43□□□□□ -0.74
PTPRE-207ENST00000471218 ME1P48163 572 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 STAT2P52630 851 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 MRPL12P52815 198 aaKnown RBP10.43□□□□□ -0.74
PTPRE-207ENST00000471218 NAPAP54920 295 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 ERVK-9P63128 1117 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 ERVK-24P63145 666 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 FAM160A1Q05DH4 1040 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 USP17L24Q0WX57 530 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms