RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 KCNB1Q14721 858 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 QRICH1Q2TAL8 776 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 TBC1D10BQ4KMP7 808 aaPredicted RBP19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 MCTP2Q6DN12 878 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 TRMT44Q8IYL2 757 aaKnown RBP19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 IGSF22Q8N9C0 903 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 NRDCO43847 1150 aa19.08■□□□□ 0.64
SMARCD3-206ENST00000470588 RAD21O60216 631 aa19.08■□□□□ 0.64
SMARCD3-206ENST00000470588 TECP42680 631 aa19.08■□□□□ 0.64
SMARCD3-206ENST00000470588 GTPBP4Q9BZE4 634 aaKnown RBP19.08■□□□□ 0.64
SMARCD3-206ENST00000470588 KCND1Q9NSA2 647 aa19.08■□□□□ 0.64
SMARCD3-206ENST00000470588 SAMSN1Q9NSI8 373 aaKnown RBP19.08■□□□□ 0.64
SMARCD3-206ENST00000470588 NDUFB10O96000 172 aa19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 GCFC2P16383 781 aaKnown RBP19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 SFPQP23246 707 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 CDC37Q16543 378 aaPredicted RBP19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 TMEM266Q2M3C6 531 aa19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 KLHL10Q6JEL2 608 aa19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 BTNL9Q6UXG8 535 aa19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 SAMD7Q7Z3H4 446 aa19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 POTEDQ86YR6 584 aa19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 CALML4Q96GE6 196 aa19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 RAB34Q9BZG1 259 aa19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 ARHGEF10LQ9HCE6 1279 aa19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 RWDD2AQ9UIY3 292 aa19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 PCDHA1Q9Y5I3 950 aa19.07■□□□□ 0.64
SMARCD3-206ENST00000470588 BMP3P12645 472 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 TXKP42681 527 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 JAG1P78504 1218 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 AMPD3Q01432 767 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 RASA3Q14644 834 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 RRP1BQ14684 758 aaKnown RBP19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 UBE2SQ16763 222 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 ARMCX5Q6P1M9 558 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 PRIMPOLQ96LW4 560 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 SYNRGQ9UMZ2 1314 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 PLCG1P19174 1290 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 NR1I3Q14994 352 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 SYDE2Q5VT97 1194 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 CDKAL1Q5VV42 579 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 APOBEC3FQ8IUX4 373 aaKnown RBP19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 CCDC47Q96A33 483 aaKnown RBP19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 HOOK2Q96ED9 719 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 CTAGE1Q96RT6 745 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 C7orf25Q9BPX7 421 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 AMNQ9BXJ7 453 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 RNF181Q9P0P0 153 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 HACL1Q9UJ83 578 aa19.06■□□□□ 0.64
SMARCD3-206ENST00000470588 TDP2O95551 362 aa19.05■□□□□ 0.64
SMARCD3-206ENST00000470588 KCNJ6P48051 423 aa19.05■□□□□ 0.64
SMARCD3-206ENST00000470588 USP11P51784 963 aa19.05■□□□□ 0.64
SMARCD3-206ENST00000470588 STX17P56962 302 aa19.05■□□□□ 0.64
SMARCD3-206ENST00000470588 SMYD4Q8IYR2 804 aaPredicted RBP19.05■□□□□ 0.64
SMARCD3-206ENST00000470588 MMTAG2Q9BU76 263 aaKnown RBP19.05■□□□□ 0.64
SMARCD3-206ENST00000470588 SH2D4AQ9H788 454 aa19.05■□□□□ 0.64
SMARCD3-206ENST00000470588 INTS13Q9NVM9 706 aa19.05■□□□□ 0.64
SMARCD3-206ENST00000470588 GPRC5DQ9NZD1 345 aa19.05■□□□□ 0.64
SMARCD3-206ENST00000470588 LRWD1Q9UFC0 647 aa19.05■□□□□ 0.64
SMARCD3-206ENST00000470588 KLRC4O43908 158 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 RHOBTB3O94955 611 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 TPD52L1Q16890 204 aaPredicted RBP19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 ILDR2Q71H61 639 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 FBXO11Q86XK2 927 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 PLIN2Q99541 437 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 ZBTB21Q9ULJ3 1066 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 A0A1B0GTH6 734 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 TMEM232C9JQI7 657 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 SLC37A4O43826 429 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 EGFRP00533 1210 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 TRAF1Q13077 416 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 PAK1Q13153 545 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 TBX2Q13207 712 aaPredicted RBP19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 AP3B2Q13367 1082 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 KMT5BQ4FZB7 885 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 CCDC112Q8NEF3 446 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 STK17AQ9UEE5 414 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 DDX25Q9UHL0 483 aaKnown RBP19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 CTNND2Q9UQB3 1225 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 TMX2Q9Y320 296 aa19.04■□□□□ 0.64
SMARCD3-206ENST00000470588 ATAD5Q96QE3 1844 aa19.03■□□□□ 0.64
SMARCD3-206ENST00000470588 CYP3A7-CYP3A51PA0A087WV96 503 aa19.03■□□□□ 0.64
SMARCD3-206ENST00000470588 A0A1W2PRG0 241 aa19.03■□□□□ 0.64
SMARCD3-206ENST00000470588 CYP3A7P24462 503 aa19.03■□□□□ 0.64
SMARCD3-206ENST00000470588 FILIP1LQ4L180 1135 aa19.03■□□□□ 0.64
SMARCD3-206ENST00000470588 MIGA2Q7L4E1 593 aa19.03■□□□□ 0.64
SMARCD3-206ENST00000470588 TEX2Q8IWB9 1127 aa19.03■□□□□ 0.64
SMARCD3-206ENST00000470588 NELFBQ8WX92 580 aa19.03■□□□□ 0.64
SMARCD3-206ENST00000470588 GOPCQ9HD26 462 aa19.03■□□□□ 0.64
SMARCD3-206ENST00000470588 FOSP01100 380 aaPredicted RBP19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 CAP2P40123 477 aa19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 PRCPP42785 496 aa19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 MAP3K10Q02779 954 aa19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 SPAG1Q07617 926 aa19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 IKQ13123 557 aaPredicted RBP19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 STIM1Q13586 685 aa19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 HSP90AA4PQ58FG1 418 aa19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 DCAF15Q66K64 600 aa19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 SPECC1LQ69YQ0 1117 aa19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 MOXD1Q6UVY6 613 aa19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 ADSSL1Q8N142 457 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms