RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 TMED8Q6PL24 325 aaPredicted RBP5.63□□□□□ -1.51
SF3B1-208ENST00000470268 LINC00114Q6XXX2 140 aa5.63□□□□□ -1.51
SF3B1-208ENST00000470268 TREML1Q86YW5 311 aa5.63□□□□□ -1.51
SF3B1-208ENST00000470268 ZFPM1Q8IX07 1006 aa5.63□□□□□ -1.51
SF3B1-208ENST00000470268 IFNL3Q8IZI9 196 aa5.63□□□□□ -1.51
SF3B1-208ENST00000470268 TRPM4Q8TD43 1214 aa5.63□□□□□ -1.51
SF3B1-208ENST00000470268 TGFBRAP1Q8WUH2 860 aa5.63□□□□□ -1.51
SF3B1-208ENST00000470268 ZIC5Q96T25 663 aa5.63□□□□□ -1.51
SF3B1-208ENST00000470268 DSCC1Q9BVC3 393 aa5.63□□□□□ -1.51
SF3B1-208ENST00000470268 CRISPLD1Q9H336 500 aa5.63□□□□□ -1.51
SF3B1-208ENST00000470268 DCP1AQ9NPI6 582 aaPredicted RBP5.63□□□□□ -1.51
SF3B1-208ENST00000470268 USP40Q9NVE5 1235 aa5.63□□□□□ -1.51
SF3B1-208ENST00000470268 DMGDHQ9UI17 866 aaKnown RBP5.63□□□□□ -1.51
SF3B1-208ENST00000470268 HDAC9Q9UKV0 1011 aa5.63□□□□□ -1.51
SF3B1-208ENST00000470268 PALD1Q9ULE6 856 aa5.63□□□□□ -1.51
SF3B1-208ENST00000470268 AK9Q5TCS8 1911 aa5.63□□□□□ -1.51
SF3B1-208ENST00000470268 DICER1Q9UPY3 1922 aaKnown RBP5.63□□□□□ -1.51
SF3B1-208ENST00000470268 CYP2D7A0A087X1C5 515 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 CLRN2A0PK11 232 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 MICAL2O94851 1124 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 BAG3O95817 575 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 THBS1P07996 1170 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 AMPD1P23109 780 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 ANP32AP39687 249 aaKnown RBP5.62□□□□□ -1.51
SF3B1-208ENST00000470268 DLGAP5Q15398 846 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 C1orf229Q6ZS94 237 aaPredicted RBP5.62□□□□□ -1.51
SF3B1-208ENST00000470268 TMC7Q7Z402 723 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 ATCAYQ86WG3 371 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 MAPKAPK5Q8IW41 473 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 TEX11Q8IYF3 940 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 DMRTB1Q96MA1 342 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 IPO9Q96P70 1041 aaKnown RBP5.62□□□□□ -1.51
SF3B1-208ENST00000470268 FAM129BQ96TA1 746 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 KIF2CQ99661 725 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 GPAMQ9HCL2 828 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 RBM8AQ9Y5S9 174 aaKnown RBP5.62□□□□□ -1.51
SF3B1-208ENST00000470268 TACC3Q9Y6A5 838 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 FLT1P17948 1338 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 RPAP1Q9BWH6 1393 aaPredicted RBP5.62□□□□□ -1.51
SF3B1-208ENST00000470268 APPP05067 770 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 CYP21A2P08686 494 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 FURINP09958 794 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 CYP2D6P10635 497 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 HSPA4P34932 840 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 HAND2P61296 217 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 PICALMQ13492 652 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 UBAP2LQ14157 1087 aaKnown RBP5.62□□□□□ -1.51
SF3B1-208ENST00000470268 GRIN2CQ14957 1233 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 KIF4BQ2VIQ3 1234 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 SLC4A8Q2Y0W8 1093 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 CTR9Q6PD62 1173 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 KIAA1211Q6ZU35 1233 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 GJD3Q8N144 294 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 TBC1D32Q96NH3 1257 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 C22orf23Q9BZE7 217 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 CRNKL1Q9BZJ0 848 aaKnown RBP5.62□□□□□ -1.51
SF3B1-208ENST00000470268 INCENPQ9NQS7 918 aa5.62□□□□□ -1.51
SF3B1-208ENST00000470268 ZNF70Q9UC06 446 aaPredicted RBP5.62□□□□□ -1.51
SF3B1-208ENST00000470268 MYH7P12883 1935 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 DDTLA6NHG4 134 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-208ENST00000470268 H7C1D1 291 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 SLC27A2O14975 620 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 TREHO43280 583 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 IGHA2P01877 340 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 RPLP1P05386 114 aaKnown RBP5.61□□□□□ -1.51
SF3B1-208ENST00000470268 ARAFP10398 606 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 GNAT2P19087 354 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 FGFR3P22607 806 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 RBM25P49756 843 aaKnown RBP5.61□□□□□ -1.51
SF3B1-208ENST00000470268 PLCD1P51178 756 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 TCP10Q12799 353 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 ALX1Q15699 326 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 ADCK5Q3MIX3 580 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 ARSJQ5FYB0 599 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-208ENST00000470268 CREB3L3Q68CJ9 461 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 FIGNL1Q6PIW4 674 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 STOX1Q6ZVD7 989 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 ZNF280CQ8ND82 737 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 KCNB2Q92953 911 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 ALKBH8Q96BT7 664 aaKnown RBP5.61□□□□□ -1.51
SF3B1-208ENST00000470268 BTBD6Q96KE9 485 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 NOL10Q9BSC4 688 aaKnown RBP5.61□□□□□ -1.51
SF3B1-208ENST00000470268 IDI2Q9BXS1 227 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 NEUROD4Q9HD90 331 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 ATP8A2Q9NTI2 1148 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 SAP30BPQ9UHR5 308 aaKnown RBP5.61□□□□□ -1.51
SF3B1-208ENST00000470268 MYH2Q9UKX2 1941 aa5.61□□□□□ -1.51
SF3B1-208ENST00000470268 CNTNAP1P78357 1384 aa5.6□□□□□ -1.51
SF3B1-208ENST00000470268 ZMYM6O95789 1325 aa5.6□□□□□ -1.51
SF3B1-208ENST00000470268 A0A1W2PNR3 127 aa5.6□□□□□ -1.51
SF3B1-208ENST00000470268 TCP10L2B9ZVM9 353 aa5.6□□□□□ -1.51
SF3B1-208ENST00000470268 EPB41L2O43491 1005 aaKnown RBP5.6□□□□□ -1.51
SF3B1-208ENST00000470268 PDGFAP04085 211 aa5.6□□□□□ -1.51
SF3B1-208ENST00000470268 PCSK2P16519 638 aa5.6□□□□□ -1.51
SF3B1-208ENST00000470268 TDO2P48775 406 aa5.6□□□□□ -1.51
SF3B1-208ENST00000470268 GIMAP6Q6P9H5 292 aa5.6□□□□□ -1.51
SF3B1-208ENST00000470268 DLK2Q6UY11 383 aa5.6□□□□□ -1.51
SF3B1-208ENST00000470268 BTLAQ7Z6A9 289 aa5.6□□□□□ -1.51
SF3B1-208ENST00000470268 NLRP8Q86W28 1048 aa5.6□□□□□ -1.51
SF3B1-208ENST00000470268 TBC1D10CQ8IV04 446 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms