RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ETF1P62495 437 aaKnown RBP9.02□□□□□ -0.97
SMC4-212ENST00000470240 ORC2Q13416 577 aaPredicted RBP9.02□□□□□ -0.97
SMC4-212ENST00000470240 E4F1Q66K89 784 aaPredicted RBP9.02□□□□□ -0.97
SMC4-212ENST00000470240 DTHD1Q6ZMT9 781 aa9.02□□□□□ -0.97
SMC4-212ENST00000470240 KRT25Q7Z3Z0 450 aa9.02□□□□□ -0.97
SMC4-212ENST00000470240 CNGA4Q8IV77 575 aa9.02□□□□□ -0.97
SMC4-212ENST00000470240 TEX11Q8IYF3 940 aa9.02□□□□□ -0.97
SMC4-212ENST00000470240 ZNF397Q8NF99 534 aaPredicted RBP9.02□□□□□ -0.97
SMC4-212ENST00000470240 SPATA20Q8TB22 786 aa9.02□□□□□ -0.97
SMC4-212ENST00000470240 TNFRSF25Q93038 417 aa9.02□□□□□ -0.97
SMC4-212ENST00000470240 PANX2Q96RD6 677 aa9.02□□□□□ -0.97
SMC4-212ENST00000470240 hCG_1642624A0A1W2PR95 340 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 USP27XA6NNY8 438 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 FOXN1O15353 648 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 ALDH1A1P00352 501 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 CCDC175P0C221 793 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 USP17L8P0C7I0 530 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 CYP2D6P10635 497 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 ZNF18P17022 549 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 SMARCA1P28370 1054 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 HOXA7P31268 230 aaPredicted RBP9.01□□□□□ -0.97
SMC4-212ENST00000470240 UBA7P41226 1012 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 BTDP43251 543 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 NAPAP54920 295 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 KCNQ4P56696 695 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 GRIN1Q05586 938 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 NCBP1Q09161 790 aaKnown RBP9.01□□□□□ -0.97
SMC4-212ENST00000470240 DPYDQ12882 1025 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 PAK1Q13153 545 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 NFIXQ14938 502 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 AGERQ15109 404 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 RRAGBQ5VZM2 374 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 WWC2Q6AWC2 1192 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 KLHL10Q6JEL2 608 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 SYT10Q6XYQ8 523 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 HEATR3Q7Z4Q2 680 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 FOXP4Q8IVH2 680 aaPredicted RBP9.01□□□□□ -0.97
SMC4-212ENST00000470240 TRMT44Q8IYL2 757 aaKnown RBP9.01□□□□□ -0.97
SMC4-212ENST00000470240 ARMC2Q8NEN0 867 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 SH3RF3Q8TEJ3 882 aaPredicted RBP9.01□□□□□ -0.97
SMC4-212ENST00000470240 ZNF384Q8TF68 577 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 TGFBRAP1Q8WUH2 860 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 RRP36Q96EU6 259 aaKnown RBP9.01□□□□□ -0.97
SMC4-212ENST00000470240 AK8Q96MA6 479 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 C6orf50Q9HD87 102 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 MAGEC2Q9UBF1 373 aaPredicted RBP9.01□□□□□ -0.97
SMC4-212ENST00000470240 RWDD2AQ9UIY3 292 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 STX8Q9UNK0 236 aa9.01□□□□□ -0.97
SMC4-212ENST00000470240 A0A1B0GTH6 734 aa9□□□□□ -0.97
SMC4-212ENST00000470240 PSMA7O14818 248 aa9□□□□□ -0.97
SMC4-212ENST00000470240 NMT2O60551 498 aa9□□□□□ -0.97
SMC4-212ENST00000470240 RPN1P04843 607 aaKnown RBP9□□□□□ -0.97
SMC4-212ENST00000470240 CASQ1P31415 396 aa9□□□□□ -0.97
SMC4-212ENST00000470240 PRPHP41219 470 aa9□□□□□ -0.97
SMC4-212ENST00000470240 AMPD3Q01432 767 aa9□□□□□ -0.97
SMC4-212ENST00000470240 FMR1Q06787 632 aaKnown RBP eCLIP9□□□□□ -0.975e-7■□□□□ 11.2
SMC4-212ENST00000470240 TUBB2AQ13885 445 aa9□□□□□ -0.97
SMC4-212ENST00000470240 NONOQ15233 471 aaKnown RBP eCLIP9□□□□□ -0.972e-56■■■■■ 142.8
SMC4-212ENST00000470240 TMEM266Q2M3C6 531 aa9□□□□□ -0.97
SMC4-212ENST00000470240 ZNF658Q5TYW1 1059 aaPredicted RBP9□□□□□ -0.97
SMC4-212ENST00000470240 PPP2R2DQ66LE6 453 aa9□□□□□ -0.97
SMC4-212ENST00000470240 FAM196AQ6ZSG2 479 aa9□□□□□ -0.97
SMC4-212ENST00000470240 SH3RF1Q7Z6J0 888 aa9□□□□□ -0.97
SMC4-212ENST00000470240 FAM114A1Q8IWE2 563 aa9□□□□□ -0.97
SMC4-212ENST00000470240 SMAP1Q8IYB5 467 aaPredicted RBP9□□□□□ -0.97
SMC4-212ENST00000470240 GRAMD1CQ8IYS0 662 aa9□□□□□ -0.97
SMC4-212ENST00000470240 IGSF22Q8N9C0 903 aa9□□□□□ -0.97
SMC4-212ENST00000470240 NOC3LQ8WTT2 800 aaKnown RBP9□□□□□ -0.97
SMC4-212ENST00000470240 DPF2Q92785 391 aa9□□□□□ -0.97
SMC4-212ENST00000470240 EPSTI1Q96J88 318 aa9□□□□□ -0.97
SMC4-212ENST00000470240 EYA3Q99504 573 aa9□□□□□ -0.97
SMC4-212ENST00000470240 TUBB2BQ9BVA1 445 aa9□□□□□ -0.97
SMC4-212ENST00000470240 SPZ1Q9BXG8 430 aa9□□□□□ -0.97
SMC4-212ENST00000470240 RAB34Q9BZG1 259 aa9□□□□□ -0.97
SMC4-212ENST00000470240 HSD3B7Q9H2F3 369 aa9□□□□□ -0.97
SMC4-212ENST00000470240 TMX1Q9H3N1 280 aa9□□□□□ -0.97
SMC4-212ENST00000470240 GOPCQ9HD26 462 aa9□□□□□ -0.97
SMC4-212ENST00000470240 BARHL2Q9NY43 387 aa9□□□□□ -0.97
SMC4-212ENST00000470240 DNAI1Q9UI46 699 aa9□□□□□ -0.97
SMC4-212ENST00000470240 CTNND2Q9UQB3 1225 aa9□□□□□ -0.97
SMC4-212ENST00000470240 SUGT1Q9Y2Z0 365 aa9□□□□□ -0.97
SMC4-212ENST00000470240 ITIH6Q6UXX5 1313 aa9□□□□□ -0.97
SMC4-212ENST00000470240 GPR75-ASB3A0A0A6YYF3 556 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 BICDL2A1A5D9 508 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 H7C1D1 291 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 J3QL48 77 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 N4BP3O15049 544 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 AP1G2O75843 785 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 IL1R1P14778 569 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 BMP6P22004 513 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 VARSP26640 1264 aaKnown RBP8.99□□□□□ -0.97
SMC4-212ENST00000470240 TM4SF1P30408 202 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 TUBB4BP68371 445 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 TBX2Q13207 712 aaPredicted RBP8.99□□□□□ -0.97
SMC4-212ENST00000470240 NR1I3Q14994 352 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 ZNF827Q17R98 1081 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 SLC27A3Q5K4L6 730 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 C16orf86Q6ZW13 317 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 MAPKAPK5Q8IW41 473 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 UBXN4Q92575 508 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms