RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 RTN1Q16799 776 aa22.4■■□□□ 1.18
PCGF3-208ENST00000470161 CCDC82Q8N4S0 544 aa22.4■■□□□ 1.18
PCGF3-208ENST00000470161 FAM133AQ8N9E0 248 aa22.4■■□□□ 1.18
PCGF3-208ENST00000470161 CLEC4DQ8WXI8 215 aa22.4■■□□□ 1.18
PCGF3-208ENST00000470161 BRPF3Q9ULD4 1205 aa22.4■■□□□ 1.18
PCGF3-208ENST00000470161 GOLGA8AA7E2F4 631 aa22.39■■□□□ 1.18
PCGF3-208ENST00000470161 GOLGA8BA8MQT2 603 aa22.39■■□□□ 1.18
PCGF3-208ENST00000470161 PLEKHA8P1O95397 391 aa22.39■■□□□ 1.18
PCGF3-208ENST00000470161 CAPN2P17655 700 aa22.39■■□□□ 1.18
PCGF3-208ENST00000470161 CMTR1Q8N1G2 835 aaKnown RBP22.39■■□□□ 1.18
PCGF3-208ENST00000470161 SYNGAP1Q96PV0 1343 aa22.39■■□□□ 1.18
PCGF3-208ENST00000470161 ASB14A6NK59 587 aa22.39■■□□□ 1.17
PCGF3-208ENST00000470161 MSCO60682 206 aa22.39■■□□□ 1.17
PCGF3-208ENST00000470161 PRAMEF19Q5SWL8 479 aa22.39■■□□□ 1.17
PCGF3-208ENST00000470161 MAMDC4Q6UXC1 1216 aa22.39■■□□□ 1.17
PCGF3-208ENST00000470161 FBXL16Q8N461 479 aa22.39■■□□□ 1.17
PCGF3-208ENST00000470161 SRBD1Q8N5C6 995 aaKnown RBP22.39■■□□□ 1.17
PCGF3-208ENST00000470161 RGS22Q8NE09 1264 aa22.39■■□□□ 1.17
PCGF3-208ENST00000470161 NRBP1Q9UHY1 535 aa22.39■■□□□ 1.17
PCGF3-208ENST00000470161 LIMCH1Q9UPQ0 1083 aa22.39■■□□□ 1.17
PCGF3-208ENST00000470161 CCDC196A0A1B0GTZ2 297 aa22.38■■□□□ 1.17
PCGF3-208ENST00000470161 CYBAP13498 195 aa22.38■■□□□ 1.17
PCGF3-208ENST00000470161 RGS19P49795 217 aa22.38■■□□□ 1.17
PCGF3-208ENST00000470161 METAP2P50579 478 aaKnown RBP eCLIP22.38■■□□□ 1.17
PCGF3-208ENST00000470161 RCAN1P53805 252 aa22.38■■□□□ 1.17
PCGF3-208ENST00000470161 RPS6P62753 249 aaKnown RBP22.38■■□□□ 1.17
PCGF3-208ENST00000470161 PPP2R5BQ15173 497 aa22.38■■□□□ 1.17
PCGF3-208ENST00000470161 MPHOSPH6Q99547 160 aaKnown RBP22.38■■□□□ 1.17
PCGF3-208ENST00000470161 IGHA2P01877 340 aa22.37■■□□□ 1.17
PCGF3-208ENST00000470161 SLC35G1Q2M3R5 365 aa22.37■■□□□ 1.17
PCGF3-208ENST00000470161 TMTC3Q6ZXV5 915 aa22.37■■□□□ 1.17
PCGF3-208ENST00000470161 ARMCX2Q7L311 632 aa22.37■■□□□ 1.17
PCGF3-208ENST00000470161 MAF1Q9H063 256 aa22.37■■□□□ 1.17
PCGF3-208ENST00000470161 SOWAHBA6NEL2 793 aa22.36■■□□□ 1.17
PCGF3-208ENST00000470161 LARGE1O95461 756 aa22.36■■□□□ 1.17
PCGF3-208ENST00000470161 CFBP00751 764 aa22.36■■□□□ 1.17
PCGF3-208ENST00000470161 MLLT1Q03111 559 aaPredicted RBP22.36■■□□□ 1.17
PCGF3-208ENST00000470161 SLC30A10Q6XR72 485 aa22.36■■□□□ 1.17
PCGF3-208ENST00000470161 AGXT2Q9BYV1 514 aa22.36■■□□□ 1.17
PCGF3-208ENST00000470161 ABHD16BQ9H3Z7 469 aa22.36■■□□□ 1.17
PCGF3-208ENST00000470161 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.36■■□□□ 1.17
PCGF3-208ENST00000470161 DDX20Q9UHI6 824 aaKnown RBP22.36■■□□□ 1.17
PCGF3-208ENST00000470161 PLXNA1Q9UIW2 1896 aa22.36■■□□□ 1.17
PCGF3-208ENST00000470161 B4DLN1 442 aa22.36■■□□□ 1.17
PCGF3-208ENST00000470161 SEPT4O43236 478 aa22.36■■□□□ 1.17
PCGF3-208ENST00000470161 PPP1R11O60927 126 aaPredicted RBP22.36■■□□□ 1.17
PCGF3-208ENST00000470161 MRPL12P52815 198 aaKnown RBP22.36■■□□□ 1.17
PCGF3-208ENST00000470161 TRPV1Q8NER1 839 aa22.36■■□□□ 1.17
PCGF3-208ENST00000470161 ZHX1Q9UKY1 873 aaPredicted RBP22.36■■□□□ 1.17
PCGF3-208ENST00000470161 PURBQ96QR8 312 aaKnown RBP22.35■■□□□ 1.17
PCGF3-208ENST00000470161 CRISPLD2Q9H0B8 497 aa22.35■■□□□ 1.17
PCGF3-208ENST00000470161 SNAI1O95863 264 aaPredicted RBP22.34■■□□□ 1.17
PCGF3-208ENST00000470161 ACVR2BQ13705 512 aa22.34■■□□□ 1.17
PCGF3-208ENST00000470161 DNERQ8NFT8 737 aa22.34■■□□□ 1.17
PCGF3-208ENST00000470161 INTS4Q96HW7 963 aaKnown RBP22.34■■□□□ 1.17
PCGF3-208ENST00000470161 FGD4Q96M96 766 aa22.34■■□□□ 1.17
PCGF3-208ENST00000470161 RBBP6Q7Z6E9 1792 aaKnown RBP22.34■■□□□ 1.17
PCGF3-208ENST00000470161 TOB2Q14106 344 aaPredicted RBP22.33■■□□□ 1.17
PCGF3-208ENST00000470161 TBC1D5Q92609 795 aa22.33■■□□□ 1.17
PCGF3-208ENST00000470161 SHISA4Q96DD7 197 aa22.33■■□□□ 1.17
PCGF3-208ENST00000470161 ALDH8A1Q9H2A2 487 aaPredicted RBP22.33■■□□□ 1.17
PCGF3-208ENST00000470161 LOC102724159A0A0B4J2E5 919 aa22.33■■□□□ 1.16
PCGF3-208ENST00000470161 AKR1A1P14550 325 aa22.33■■□□□ 1.16
PCGF3-208ENST00000470161 ADD1P35611 737 aaKnown RBP22.33■■□□□ 1.16
PCGF3-208ENST00000470161 ALDH5A1P51649 535 aaPredicted RBP22.33■■□□□ 1.16
PCGF3-208ENST00000470161 PWP2Q15269 919 aaKnown RBP22.33■■□□□ 1.16
PCGF3-208ENST00000470161 ANO1Q5XXA6 986 aa22.33■■□□□ 1.16
PCGF3-208ENST00000470161 LHX8Q68G74 356 aa22.33■■□□□ 1.16
PCGF3-208ENST00000470161 TNPO1Q92973 898 aaKnown RBP22.33■■□□□ 1.16
PCGF3-208ENST00000470161 MAP3K20Q9NYL2 800 aaKnown RBP22.33■■□□□ 1.16
PCGF3-208ENST00000470161 OGDHLQ9ULD0 1010 aa22.33■■□□□ 1.16
PCGF3-208ENST00000470161 FAM184BQ9ULE4 1060 aa22.33■■□□□ 1.16
PCGF3-208ENST00000470161 hCG_1642624A0A1W2PR95 340 aa22.32■■□□□ 1.16
PCGF3-208ENST00000470161 FARP2O94887 1054 aaPredicted RBP22.32■■□□□ 1.16
PCGF3-208ENST00000470161 ZNF865P0CJ78 1059 aaPredicted RBP22.32■■□□□ 1.16
PCGF3-208ENST00000470161 RARBP10826 455 aa22.32■■□□□ 1.16
PCGF3-208ENST00000470161 ANKRD1Q15327 319 aa22.32■■□□□ 1.16
PCGF3-208ENST00000470161 SAMD3Q8N6K7 520 aa22.32■■□□□ 1.16
PCGF3-208ENST00000470161 ANKLE1Q8NAG6 615 aa22.32■■□□□ 1.16
PCGF3-208ENST00000470161 SYTL5Q8TDW5 730 aaPredicted RBP22.32■■□□□ 1.16
PCGF3-208ENST00000470161 ZSCAN31Q96LW9 406 aaPredicted RBP22.32■■□□□ 1.16
PCGF3-208ENST00000470161 TPCN1Q9ULQ1 816 aa22.32■■□□□ 1.16
PCGF3-208ENST00000470161 GCOM1H8Y6P7 765 aaPredicted RBP22.31■■□□□ 1.16
PCGF3-208ENST00000470161 MYCNP04198 464 aaPredicted RBP22.31■■□□□ 1.16
PCGF3-208ENST00000470161 POLR2MP0CAP2 368 aa22.31■■□□□ 1.16
PCGF3-208ENST00000470161 PDIA3P30101 505 aaKnown RBP22.31■■□□□ 1.16
PCGF3-208ENST00000470161 CDC27P30260 824 aa22.31■■□□□ 1.16
PCGF3-208ENST00000470161 PDE4DQ08499 809 aa22.31■■□□□ 1.16
PCGF3-208ENST00000470161 ME3Q16798 604 aa22.31■■□□□ 1.16
PCGF3-208ENST00000470161 NSUN6Q8TEA1 469 aaKnown RBP22.31■■□□□ 1.16
PCGF3-208ENST00000470161 RMDN3Q96TC7 470 aa22.31■■□□□ 1.16
PCGF3-208ENST00000470161 SH2B1Q9NRF2 756 aaPredicted RBP22.31■■□□□ 1.16
PCGF3-208ENST00000470161 V9GY48 417 aaPredicted RBP22.31■■□□□ 1.16
PCGF3-208ENST00000470161 EVCP57679 992 aa22.3■■□□□ 1.16
PCGF3-208ENST00000470161 AKAP17AQ02040 695 aaKnown RBP22.3■■□□□ 1.16
PCGF3-208ENST00000470161 PKP1Q13835 747 aa22.3■■□□□ 1.16
PCGF3-208ENST00000470161 EEPD1Q7L9B9 569 aa22.3■■□□□ 1.16
PCGF3-208ENST00000470161 HEATR3Q7Z4Q2 680 aa22.3■■□□□ 1.16
PCGF3-208ENST00000470161 CCDC83Q8IWF9 413 aa22.3■■□□□ 1.16
PCGF3-208ENST00000470161 CUL5Q93034 780 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms