RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 SLC27A3Q5K4L6 730 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 TRIML1Q8N9V2 468 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 GLIS3Q8NEA6 775 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 TEKT1Q969V4 418 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 ST7Q9NRC1 585 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 FAM53CQ9NYF3 392 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 ADD3Q9UEY8 706 aaKnown RBP10.58□□□□□ -0.72
TOP3A-203ENST00000469739 ANKRD31Q8N7Z5 1873 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 NAV1Q8NEY1 1877 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 CDK5RAP2Q96SN8 1893 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 PPP1R11O60927 126 aaPredicted RBP10.57□□□□□ -0.72
TOP3A-203ENST00000469739 SLU7O95391 586 aaKnown RBP10.57□□□□□ -0.72
TOP3A-203ENST00000469739 CYP2C19P33261 490 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 LONP1P36776 959 aaKnown RBP10.57□□□□□ -0.72
TOP3A-203ENST00000469739 CRKP46108 304 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 APTXQ7Z2E3 356 aaKnown RBP10.57□□□□□ -0.72
TOP3A-203ENST00000469739 SLF2Q8IX21 1173 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 CRAMP1Q96RY5 1269 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 SLF1Q9BQI6 1058 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 LTBP1Q14766 1721 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 A0A1B0GTH6 734 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 GNA11P29992 359 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 TRAPPC10P48553 1259 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 SEPT2Q15019 361 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 APOBEC3HQ6NTF7 200 aaKnown RBP10.57□□□□□ -0.72
TOP3A-203ENST00000469739 CCDC84Q86UT8 332 aaPredicted RBP10.57□□□□□ -0.72
TOP3A-203ENST00000469739 CDK5RAP3Q96JB5 506 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 COA1Q9GZY4 146 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 M0R2N6 131 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 ARHGAP6O43182 974 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 GYPCP04921 128 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 HOXA10P31260 410 aaPredicted RBP10.57□□□□□ -0.72
TOP3A-203ENST00000469739 SHMT1P34896 483 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 COPB1P53618 953 aaKnown RBP10.57□□□□□ -0.72
TOP3A-203ENST00000469739 CALCRLQ16602 461 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 NLGN1Q8N2Q7 840 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 MNS1Q8NEH6 495 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 ZC3H15Q8WU90 426 aaKnown RBP10.57□□□□□ -0.72
TOP3A-203ENST00000469739 CCDC12Q8WUD4 166 aaPredicted RBP10.57□□□□□ -0.72
TOP3A-203ENST00000469739 CHP1Q99653 195 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 ZMYND12Q9H0C1 365 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 JMJD4Q9H9V9 463 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 EFCC1Q9HA90 598 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 RNF216Q9NWF9 866 aaPredicted RBP10.57□□□□□ -0.72
TOP3A-203ENST00000469739 TRIM10Q9UDY6 481 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 LRWD1Q9UFC0 647 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 PUF60Q9UHX1 559 aaKnown RBP10.57□□□□□ -0.72
TOP3A-203ENST00000469739 STK24Q9Y6E0 443 aa10.57□□□□□ -0.72
TOP3A-203ENST00000469739 B4DLN1 442 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 TCP10L2B9ZVM9 353 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 C21orf2O43822 256 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 KRT9P35527 623 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 ADCY7P51828 1080 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 TEX35Q5T0J7 233 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 ZNF658Q5TYW1 1059 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-203ENST00000469739 FBXO38Q6PIJ6 1188 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 TRIM65Q6PJ69 517 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 KCNV2Q8TDN2 545 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 RAD17O75943 681 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 TTLL1O95922 423 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 EEF2P13639 858 aaKnown RBP10.56□□□□□ -0.72
TOP3A-203ENST00000469739 SLC1A4P43007 532 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 TBX2Q13207 712 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-203ENST00000469739 ARHGAP29Q52LW3 1261 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 KCNK18Q7Z418 384 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 CSGALNACT2Q8N6G5 542 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 HINFPQ9BQA5 517 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 DNAJC18Q9H819 358 aa10.56□□□□□ -0.72
TOP3A-203ENST00000469739 ZBTB12Q9Y330 459 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-203ENST00000469739 PSDA5PKW4 1024 aaPredicted RBP10.55□□□□□ -0.72
TOP3A-203ENST00000469739 HLA-DOAP06340 250 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 HOXA13P31271 388 aaPredicted RBP10.55□□□□□ -0.72
TOP3A-203ENST00000469739 STAT3P40763 770 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 UBXN2AP68543 259 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 ENOX2Q16206 610 aaKnown RBP10.55□□□□□ -0.72
TOP3A-203ENST00000469739 TCP11X2Q5H9J9 407 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 KRT25Q7Z3Z0 450 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 SNX29Q8TEQ0 813 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 EXOC1Q9NV70 894 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 GAKO14976 1311 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 ZSCAN12O43309 604 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 NPR1P16066 1061 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 CASQ1P31415 396 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 EN1Q05925 392 aaPredicted RBP10.55□□□□□ -0.72
TOP3A-203ENST00000469739 CDKAL1Q5VV42 579 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 ARL6IP4Q66PJ3 421 aaKnown RBP10.55□□□□□ -0.72
TOP3A-203ENST00000469739 ANKS1AQ92625 1134 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 SPZ1Q9BXG8 430 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 NPHP3-ACAD11A0A0J9YXS1 232 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 ECE2O60344 883 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 MTIF2P46199 727 aaKnown RBP10.55□□□□□ -0.72
TOP3A-203ENST00000469739 CERKLQ49MI3 558 aaPredicted RBP10.55□□□□□ -0.72
TOP3A-203ENST00000469739 ZNF569Q5MCW4 686 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 FCHSD1Q86WN1 690 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 IRF2BP1Q8IU81 584 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 MMTAG2Q9BU76 263 aaKnown RBP10.55□□□□□ -0.72
TOP3A-203ENST00000469739 FAM117AQ9C073 453 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 SH3GLB2Q9NR46 395 aa10.55□□□□□ -0.72
TOP3A-203ENST00000469739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.55□□□□□ -0.727e-6■■■■□ 21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms