RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 SFSWAPQ12872 951 aaKnown RBP11.03□□□□□ -0.64
NUP50-214ENST00000469163 CUL3Q13618 768 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 GALNT17Q6IS24 598 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 OLFML1Q6UWY5 402 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 RNF168Q8IYW5 571 aaPredicted RBP11.03□□□□□ -0.64
NUP50-214ENST00000469163 VGLL2Q8N8G2 317 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 PLIN2Q99541 437 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 ABCB6Q9NP58 842 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 HOOK1Q9UJC3 728 aaKnown RBP11.03□□□□□ -0.64
NUP50-214ENST00000469163 PLSCR1O15162 318 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 MYO1BO43795 1136 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 RNF8O76064 485 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 SLC8A1P32418 973 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 ARHGAP25P42331 645 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 ROR2Q01974 943 aaKnown RBP11.02□□□□□ -0.64
NUP50-214ENST00000469163 CASP8Q14790 479 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 Q4G0T1 1027 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 HSP90AA4PQ58FG1 418 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 MIS18BP1Q6P0N0 1132 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 HEATR3Q7Z4Q2 680 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 NSMCE1Q8WV22 266 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 PIM2Q9P1W9 311 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 PLCH1Q4KWH8 1693 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 TNKSO95271 1327 aa11.02□□□□□ -0.64
NUP50-214ENST00000469163 ONECUT3O60422 494 aaPredicted RBP11.02□□□□□ -0.65
NUP50-214ENST00000469163 UPP2O95045 317 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 SFPQP23246 707 aaKnown RBP eCLIP11.02□□□□□ -0.65
NUP50-214ENST00000469163 TM4SF1P30408 202 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 FNTAP49354 379 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 ANKRD1Q15327 319 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 SHROOM1Q2M3G4 852 aaPredicted RBP11.02□□□□□ -0.65
NUP50-214ENST00000469163 TRIM58Q8NG06 486 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 GPKOWQ92917 476 aaPredicted RBP eCLIP11.02□□□□□ -0.65
NUP50-214ENST00000469163 NSUN4Q96CB9 384 aaKnown RBP11.02□□□□□ -0.65
NUP50-214ENST00000469163 SLC40A1Q9NP59 571 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 VCAM1P19320 739 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 SESN3P58005 492 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 BEND6Q5SZJ8 279 aaPredicted RBP11.02□□□□□ -0.65
NUP50-214ENST00000469163 BZW1Q7L1Q6 419 aaKnown RBP11.02□□□□□ -0.65
NUP50-214ENST00000469163 CATIPQ7Z7H3 387 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 TRIM22Q8IYM9 498 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 SMCR8Q8TEV9 937 aaPredicted RBP11.02□□□□□ -0.65
NUP50-214ENST00000469163 WHAMMQ8TF30 809 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 CUL5Q93034 780 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 TEKT1Q969V4 418 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 CAMKK2Q96RR4 588 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 GORASP1Q9BQQ3 440 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 ALG1Q9BT22 464 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 MYO1AQ9UBC5 1043 aa11.02□□□□□ -0.65
NUP50-214ENST00000469163 BIN1O00499 593 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 FSBPO95073 299 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 STK38Q15208 465 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 DLGAP5Q15398 846 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 ACCSLQ4AC99 568 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 TLDC1Q6P9B6 456 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 APBB1IPQ7Z5R6 666 aaPredicted RBP11.01□□□□□ -0.65
NUP50-214ENST00000469163 MAB21L3Q8N8X9 362 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 CXorf38Q8TB03 319 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 SPATA32Q96LK8 384 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 CENPOQ9BU64 300 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 HOMER2Q9NSB8 354 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 VPS54Q9P1Q0 977 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 PUF60Q9UHX1 559 aaKnown RBP11.01□□□□□ -0.65
NUP50-214ENST00000469163 TRPC6Q9Y210 931 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 LEMD3Q9Y2U8 911 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 AOX1Q06278 1338 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 SHANK3Q9BYB0 1731 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 RHOXF2BP0C7M4 288 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 B4GALNT4Q76KP1 1039 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 RHOXF2Q9BQY4 288 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 GPR108Q9NPR9 543 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 STK24Q9Y6E0 443 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 PHLPP2Q6ZVD8 1323 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 MEFVO15553 781 aaPredicted RBP11.01□□□□□ -0.65
NUP50-214ENST00000469163 SMTNP53814 917 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 GSDMDP57764 484 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 GNG11P61952 73 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 RTN1Q16799 776 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 CCDC50Q8IVM0 306 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 IGSF22Q8N9C0 903 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 UHMK1Q8TAS1 419 aaKnown RBP11.01□□□□□ -0.65
NUP50-214ENST00000469163 FAM76AQ8TAV0 307 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 RASGRP4Q8TDF6 673 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 ITM2BQ9Y287 266 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 ATP6V0A2Q9Y487 856 aa11.01□□□□□ -0.65
NUP50-214ENST00000469163 GOLGA6L7A0A1B0GV03 622 aa11□□□□□ -0.65
NUP50-214ENST00000469163 CREB3O43889 395 aa11□□□□□ -0.65
NUP50-214ENST00000469163 NAT2P11245 290 aa11□□□□□ -0.65
NUP50-214ENST00000469163 FGFR2P21802 821 aa11□□□□□ -0.65
NUP50-214ENST00000469163 IRAK1P51617 712 aa11□□□□□ -0.65
NUP50-214ENST00000469163 TOB2Q14106 344 aaPredicted RBP11□□□□□ -0.65
NUP50-214ENST00000469163 USH1GQ495M9 461 aa11□□□□□ -0.65
NUP50-214ENST00000469163 USP17L2Q6R6M4 530 aa11□□□□□ -0.65
NUP50-214ENST00000469163 CEP57L1Q8IYX8 460 aa11□□□□□ -0.65
NUP50-214ENST00000469163 CTNNBL1Q8WYA6 563 aaPredicted RBP11□□□□□ -0.65
NUP50-214ENST00000469163 ZSWIM6Q9HCJ5 1215 aa11□□□□□ -0.65
NUP50-214ENST00000469163 TPX2Q9ULW0 747 aaKnown RBP11□□□□□ -0.65
NUP50-214ENST00000469163 ANGEL1Q9UNK9 670 aaKnown RBP11□□□□□ -0.65
NUP50-214ENST00000469163 CTDP1Q9Y5B0 961 aaPredicted RBP11□□□□□ -0.65
NUP50-214ENST00000469163 ATP6V1DQ9Y5K8 247 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms