RNA–Protein interactions for RNA: ENST00000468993.1

SMG5-202, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 345 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-202ENST00000468993 NKAPQ8N5F7 415 aaKnown RBP6.11□□□□□ -1.43
SMG5-202ENST00000468993 ACRBPQ8NEB7 543 aa6.11□□□□□ -1.43
SMG5-202ENST00000468993 FAM163AQ96GL9 167 aaPredicted RBP6.11□□□□□ -1.43
SMG5-202ENST00000468993 MPP4Q96JB8 637 aa6.11□□□□□ -1.43
SMG5-202ENST00000468993 TMEM87BQ96K49 555 aa6.11□□□□□ -1.43
SMG5-202ENST00000468993 CCDC74BQ96LY2 380 aa6.11□□□□□ -1.43
SMG5-202ENST00000468993 NEUROD6Q96NK8 337 aa6.11□□□□□ -1.43
SMG5-202ENST00000468993 GPR101Q96P66 508 aaPredicted RBP6.11□□□□□ -1.43
SMG5-202ENST00000468993 UBE2OQ9C0C9 1292 aaKnown RBP6.11□□□□□ -1.43
SMG5-202ENST00000468993 LACRTQ9GZZ8 138 aa6.11□□□□□ -1.43
SMG5-202ENST00000468993 NUCKS1Q9H1E3 243 aaKnown RBP6.11□□□□□ -1.43
SMG5-202ENST00000468993 VTA1Q9NP79 307 aa6.11□□□□□ -1.43
SMG5-202ENST00000468993 MKS1Q9NXB0 559 aa6.11□□□□□ -1.43
SMG5-202ENST00000468993 TOR4AQ9NXH8 423 aa6.11□□□□□ -1.43
SMG5-202ENST00000468993 TJP2Q9UDY2 1190 aa6.11□□□□□ -1.43
SMG5-202ENST00000468993 ZKSCAN5Q9Y2L8 839 aa6.11□□□□□ -1.43
SMG5-202ENST00000468993 CCDC88BA6NC98 1476 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 FGD5Q6ZNL6 1462 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 SOS2Q07890 1332 aaPredicted RBP6.1□□□□□ -1.43
SMG5-202ENST00000468993 TRIM75PA6NK02 468 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 F5H423 210 aaPredicted RBP6.1□□□□□ -1.43
SMG5-202ENST00000468993 BNIP3LO60238 219 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 EPHA1P21709 976 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 GBP1P32455 592 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 ECE1P42892 770 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 RENBPP51606 427 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 ALDH5A1P51649 535 aaPredicted RBP6.1□□□□□ -1.43
SMG5-202ENST00000468993 USP14P54578 494 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 ODF1Q14990 250 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 POU4F3Q15319 338 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 RRP12Q5JTH9 1297 aaKnown RBP6.1□□□□□ -1.43
SMG5-202ENST00000468993 HYIQ5T013 277 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 SLC6A19Q695T7 634 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 MRPL14Q6P1L8 145 aaKnown RBP6.1□□□□□ -1.43
SMG5-202ENST00000468993 ABHD17CQ6PCB6 329 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 PGM2L1Q6PCE3 622 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 MRPL41Q8IXM3 137 aaKnown RBP6.1□□□□□ -1.43
SMG5-202ENST00000468993 DRC7Q8IY82 874 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 ARHGEF39Q8N4T4 335 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 C1orf131Q8NDD1 294 aaKnown RBP6.1□□□□□ -1.43
SMG5-202ENST00000468993 SLC35G2Q8TBE7 412 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 HPS1Q92902 700 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 SKA1Q96BD8 255 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 TAAR9Q96RI9 348 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 NAA15Q9BXJ9 866 aaKnown RBP6.1□□□□□ -1.43
SMG5-202ENST00000468993 NRSN2Q9GZP1 204 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 CSRNP2Q9H175 543 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 IGFLR1Q9H665 355 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 CABP5Q9NP86 173 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 PRDM6Q9NQX0 595 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 CYP26B1Q9NR63 512 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 SH2B1Q9NRF2 756 aaPredicted RBP6.1□□□□□ -1.43
SMG5-202ENST00000468993 FBXO2Q9UK22 296 aaPredicted RBP6.1□□□□□ -1.43
SMG5-202ENST00000468993 TRIM33Q9UPN9 1127 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 ZNF451Q9Y4E5 1061 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 TRAF6Q9Y4K3 522 aa6.1□□□□□ -1.43
SMG5-202ENST00000468993 FIGNL2A6NMB9 653 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 RNASEH2AO75792 299 aaKnown RBP6.09□□□□□ -1.43
SMG5-202ENST00000468993 CPP00450 1065 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 SCG5P05408 212 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 ITGA4P13612 1032 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 ZKSCAN1P17029 563 aaPredicted RBP6.09□□□□□ -1.43
SMG5-202ENST00000468993 CD247P20963 164 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 AKAP5P24588 427 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 HOXC12P31275 282 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 TM4SF4P48230 202 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 GUCY1A3Q02108 690 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 RING1Q06587 406 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 ELF2Q15723 593 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 LONRF1Q17RB8 773 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 ZC3H12AQ5D1E8 599 aaKnown RBP6.09□□□□□ -1.43
SMG5-202ENST00000468993 SLC35F1Q5T1Q4 408 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 IFIT1BQ5T764 474 aaKnown RBP6.09□□□□□ -1.43
SMG5-202ENST00000468993 GTF2IRD2BQ6EKJ0 949 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 GTF2IRD2Q86UP8 949 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 FAM35AQ86V20 835 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 C12orf40Q86WS4 652 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 MYLK4Q86YV6 388 aaPredicted RBP6.09□□□□□ -1.43
SMG5-202ENST00000468993 TMEM145Q8NBT3 493 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 CLRN3Q8NCR9 226 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 DCAF4Q8WV16 495 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 SNRNP27Q8WVK2 155 aaKnown RBP6.09□□□□□ -1.43
SMG5-202ENST00000468993 POF1BQ8WVV4 589 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 KIFC2Q96AC6 838 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 C1orf159Q96HA4 380 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 SLC12A5Q9H2X9 1139 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 SPTLC3Q9NUV7 552 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 C14orf119Q9NWQ9 140 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 THG1LQ9NWX6 298 aaKnown RBP6.09□□□□□ -1.43
SMG5-202ENST00000468993 B4GALT6Q9UBX8 382 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 CGGBP1Q9UFW8 167 aaPredicted RBP6.09□□□□□ -1.43
SMG5-202ENST00000468993 PCDHA9Q9Y5H5 950 aa6.09□□□□□ -1.43
SMG5-202ENST00000468993 EPRSP07814 1512 aaKnown RBP6.09□□□□□ -1.44
SMG5-202ENST00000468993 H7C1W4 665 aa6.08□□□□□ -1.44
SMG5-202ENST00000468993 CTNND1O60716 968 aaKnown RBP6.08□□□□□ -1.44
SMG5-202ENST00000468993 KCNH1O95259 989 aa6.08□□□□□ -1.44
SMG5-202ENST00000468993 ECEL1O95672 775 aa6.08□□□□□ -1.44
SMG5-202ENST00000468993 ZBED1O96006 694 aa6.08□□□□□ -1.44
SMG5-202ENST00000468993 HRGP04196 525 aa6.08□□□□□ -1.44
SMG5-202ENST00000468993 SNRPB2P08579 225 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms