RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 PTGDRQ13258 359 aa14.82□□□□□ -0.04
COL4A1-202ENST00000467182 SPRYD7Q5W111 196 aa14.82□□□□□ -0.04
COL4A1-202ENST00000467182 MCTP2Q6DN12 878 aa14.82□□□□□ -0.04
COL4A1-202ENST00000467182 FASTKD5Q7L8L6 764 aaKnown RBP14.82□□□□□ -0.04
COL4A1-202ENST00000467182 ASCC2Q9H1I8 757 aaPredicted RBP14.82□□□□□ -0.04
COL4A1-202ENST00000467182 PNMA2Q9UL42 364 aa14.82□□□□□ -0.04
COL4A1-202ENST00000467182 CEP131Q9UPN4 1083 aa14.82□□□□□ -0.04
COL4A1-202ENST00000467182 RIPK3Q9Y572 518 aa14.82□□□□□ -0.04
COL4A1-202ENST00000467182 GCOM1H8Y6P7 765 aaPredicted RBP14.81□□□□□ -0.04
COL4A1-202ENST00000467182 CUTAO60888 179 aa14.81□□□□□ -0.04
COL4A1-202ENST00000467182 POLR2MP0CAP2 368 aa14.81□□□□□ -0.04
COL4A1-202ENST00000467182 ZBTB48P10074 688 aaPredicted RBP14.81□□□□□ -0.04
COL4A1-202ENST00000467182 ALAS1P13196 640 aa14.81□□□□□ -0.04
COL4A1-202ENST00000467182 MCM7P33993 719 aa14.81□□□□□ -0.04
COL4A1-202ENST00000467182 ORC2Q13416 577 aaPredicted RBP14.81□□□□□ -0.04
COL4A1-202ENST00000467182 IL17AQ16552 155 aa14.81□□□□□ -0.04
COL4A1-202ENST00000467182 SHC4Q6S5L8 630 aa14.81□□□□□ -0.04
COL4A1-202ENST00000467182 KRI1Q8N9T8 703 aaKnown RBP14.81□□□□□ -0.04
COL4A1-202ENST00000467182 ENGASEQ8NFI3 743 aa14.81□□□□□ -0.04
COL4A1-202ENST00000467182 MBOAT7Q96N66 472 aa14.81□□□□□ -0.04
COL4A1-202ENST00000467182 CLIC6Q96NY7 704 aa14.81□□□□□ -0.04
COL4A1-202ENST00000467182 TMEM60Q9H2L4 133 aa14.81□□□□□ -0.04
COL4A1-202ENST00000467182 TMEM63CQ9P1W3 806 aa14.81□□□□□ -0.04
COL4A1-202ENST00000467182 BTBD7Q9P203 1132 aa14.81□□□□□ -0.04
COL4A1-202ENST00000467182 SRPRBQ9Y5M8 271 aaKnown RBP14.81□□□□□ -0.04
COL4A1-202ENST00000467182 LCTP09848 1927 aa14.81□□□□□ -0.04
COL4A1-202ENST00000467182 FAM237AA0A1B0GTK4 181 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 PEX10O60683 326 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 TDP2O95551 362 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 CFBP00751 764 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 FOSP01100 380 aaPredicted RBP14.8□□□□□ -0.04
COL4A1-202ENST00000467182 SREBF1P36956 1147 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 GTF2A2P52657 109 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 HUNKP57058 714 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 HERVK_113P62684 666 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 LETM2Q2VYF4 491 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 TPRNQ4KMQ1 711 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 SNRNP48Q6IEG0 339 aaKnown RBP14.8□□□□□ -0.04
COL4A1-202ENST00000467182 SAPCD2Q86UD0 394 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 RASAL3Q86YV0 1011 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 CCAR1Q8IX12 1150 aaKnown RBP14.8□□□□□ -0.04
COL4A1-202ENST00000467182 JMYQ8N9B5 988 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 BRI3BPQ8WY22 251 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 TRERF1Q96PN7 1200 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 ANP32EQ9BTT0 268 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 COL20A1Q9P218 1284 aa14.8□□□□□ -0.04
COL4A1-202ENST00000467182 CYP3A7-CYP3A51PA0A087WV96 503 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 SLC37A4O43826 429 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 CCNT1O60563 726 aaKnown RBP14.79□□□□□ -0.04
COL4A1-202ENST00000467182 CETPP11597 493 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 CMA1P23946 247 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 CYP3A7P24462 503 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 SNW1Q13573 536 aaKnown RBP14.79□□□□□ -0.04
COL4A1-202ENST00000467182 FRMPD4Q14CM0 1322 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 TKFCQ3LXA3 575 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 RESP18Q5W5W9 173 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 PPP4R3AQ6IN85 833 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 CAVIN1Q6NZI2 390 aaKnown RBP14.79□□□□□ -0.04
COL4A1-202ENST00000467182 RPTORQ8N122 1335 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 SAMD3Q8N6K7 520 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 MB21D1Q8N884 522 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
COL4A1-202ENST00000467182 TEX13BQ9BXU2 312 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 RNF146Q9NTX7 359 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 MAP3K20Q9NYL2 800 aaKnown RBP14.79□□□□□ -0.04
COL4A1-202ENST00000467182 HPSEQ9Y251 543 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 SLC45A1Q9Y2W3 748 aa14.79□□□□□ -0.04
COL4A1-202ENST00000467182 CTDP1Q9Y5B0 961 aaPredicted RBP14.79□□□□□ -0.04
COL4A1-202ENST00000467182 CCL15-CCL14A0A0B4J2E2 113 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 TESPA1A2RU30 521 aaPredicted RBP14.78□□□□□ -0.04
COL4A1-202ENST00000467182 GOLGA6L4A6NEF3 574 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 SPDYE3A6NKU9 549 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 BTBD19C9JJ37 291 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 NR1I2O75469 434 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 CYP3A4P08684 503 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 OSBPP22059 807 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 CIITAP33076 1130 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 STAT3P40763 770 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 USP11P51784 963 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 IRX3P78415 501 aaPredicted RBP14.78□□□□□ -0.04
COL4A1-202ENST00000467182 ARHGAP4P98171 946 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 MKRN3Q13064 507 aaKnown RBP14.78□□□□□ -0.04
COL4A1-202ENST00000467182 PABPC4Q13310 644 aaKnown RBP eCLIP14.78□□□□□ -0.04
COL4A1-202ENST00000467182 CCL15Q16663 113 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 ARL6IP4Q66PJ3 421 aaKnown RBP14.78□□□□□ -0.04
COL4A1-202ENST00000467182 MOXD1Q6UVY6 613 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 SLC30A10Q6XR72 485 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 ANKRD23Q86SG2 305 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 POTEDQ86YR6 584 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 MCF2L2Q86YR7 1114 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 FMR1NBQ8N0W7 255 aaPredicted RBP14.78□□□□□ -0.04
COL4A1-202ENST00000467182 FSIP1Q8NA03 581 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 SMC1BQ8NDV3 1235 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 SYTL5Q8TDW5 730 aaPredicted RBP14.78□□□□□ -0.04
COL4A1-202ENST00000467182 MRPS27Q92552 414 aaKnown RBP14.78□□□□□ -0.04
COL4A1-202ENST00000467182 FERMT2Q96AC1 680 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 MTMR9Q96QG7 549 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 PTPN18Q99952 460 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 CSRNP2Q9H175 543 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 TXNRD2Q9NNW7 524 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms